Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RNU6-897P-201ENST00000517135 105 ntBASIC2.25□□□□□ -2.05
VPS52Q8N1B4 AL117187.1-201ENST00000555482 181 ntBASIC2.25□□□□□ -2.05
VPS52Q8N1B4 MIR3126-201ENST00000577443 74 ntBASIC2.25□□□□□ -2.05
VPS52Q8N1B4 AL109918.3-201ENST00000603072 338 ntBASIC2.25□□□□□ -2.05
VPS52Q8N1B4 AC005034.5-201ENST00000604219 466 ntBASIC2.25□□□□□ -2.05
VPS52Q8N1B4 AC022202.1-201ENST00000613515 211 ntBASIC2.25□□□□□ -2.05
VPS52Q8N1B4 snoZ196.1-201ENST00000625269 89 ntBASIC2.25□□□□□ -2.05
VPS52Q8N1B4 MIR3674-201ENST00000636576 68 ntBASIC2.25□□□□□ -2.05
VPS52Q8N1B4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
VPS52Q8N1B4 LINC02555-201ENST00000563933 1951 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 RNU6-626P-201ENST00000363354 107 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 Y_RNA.214-201ENST00000364201 112 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 RNU6-1164P-201ENST00000364428 107 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 RNU6-418P-201ENST00000384035 107 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 RNU6-20P-201ENST00000384106 107 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 SNORD63-201ENST00000384262 68 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 RNU2-2P-201ENST00000410396 191 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 AL358176.2-201ENST00000425769 204 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 AC005002.2-201ENST00000438228 269 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 AC025465.3-201ENST00000510570 311 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 RNU6-856P-201ENST00000516959 98 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 AC055872.1-201ENST00000570978 278 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 U2.15-201ENST00000611544 191 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 U2.16-201ENST00000613119 191 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 U2.12-201ENST00000613778 191 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 U2.20-201ENST00000613956 192 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 U2.9-201ENST00000615427 191 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 U2.11-201ENST00000616345 191 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 U2.2-201ENST00000616535 191 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 U2.3-201ENST00000617785 191 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 U2.19-201ENST00000618602 191 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 RNU2-1-201ENST00000618664 191 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 U2.6-201ENST00000619225 191 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 U2.5-201ENST00000619465 191 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 U2.10-201ENST00000620268 191 ntBASIC2.24□□□□□ -2.05
VPS52Q8N1B4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS52Q8N1B4 Y_RNA.210-201ENST00000364161 110 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 SNORA16B-201ENST00000364674 135 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 RNU6-1310P-201ENST00000384153 107 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 Y_RNA.570-201ENST00000384750 101 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 MIR29C-201ENST00000385231 88 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.23□□□□□ -2.05
VPS52Q8N1B4 ELOCP20-201ENST00000422460 345 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 AC139712.2-201ENST00000424302 339 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS52Q8N1B4 AC016717.1-201ENST00000448918 286 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 AC245102.2-201ENST00000448956 180 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 MRPS35P2-201ENST00000508242 191 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 RNU6-1046P-201ENST00000516538 107 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 RNU2-19P-201ENST00000517288 84 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS52Q8N1B4 AC136932.1-201ENST00000574771 208 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 MIR4448-201ENST00000584360 86 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 AL096840.1-201ENST00000603287 93 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 PRR13P7-201ENST00000605538 430 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 AL627230.6-201ENST00000611129 280 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.23□□□□□ -2.05
VPS52Q8N1B4 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 AP000553.5-201ENST00000641933 54 ntBASIC2.23□□□□□ -2.05
VPS52Q8N1B4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
VPS52Q8N1B4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
VPS52Q8N1B4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
VPS52Q8N1B4 RNU6-454P-201ENST00000364292 107 ntBASIC2.22□□□□□ -2.05
VPS52Q8N1B4 RNU4-52P-201ENST00000384209 138 ntBASIC2.22□□□□□ -2.05
VPS52Q8N1B4 RNU6-160P-201ENST00000384591 107 ntBASIC2.22□□□□□ -2.05
VPS52Q8N1B4 SNORA26.9-201ENST00000391322 122 ntBASIC2.22□□□□□ -2.05
VPS52Q8N1B4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.22□□□□□ -2.05
VPS52Q8N1B4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.22□□□□□ -2.05
VPS52Q8N1B4 AC055731.1-201ENST00000474387 401 ntBASIC2.22□□□□□ -2.05
VPS52Q8N1B4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.22□□□□□ -2.05
VPS52Q8N1B4 RNU6-397P-201ENST00000516226 104 ntBASIC2.22□□□□□ -2.05
VPS52Q8N1B4 RNU6-107P-201ENST00000516643 102 ntBASIC2.22□□□□□ -2.05
VPS52Q8N1B4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.22□□□□□ -2.05
VPS52Q8N1B4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.22□□□□□ -2.05
VPS52Q8N1B4 AC005176.2-201ENST00000596933 147 ntBASIC2.22□□□□□ -2.05
VPS52Q8N1B4 AL031274.2-201ENST00000599419 203 ntBASIC2.22□□□□□ -2.05
VPS52Q8N1B4 CENPCP1-201ENST00000533085 2578 ntBASIC2.22□□□□□ -2.05
VPS52Q8N1B4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS52Q8N1B4 Y_RNA.133-201ENST00000363428 110 ntBASIC2.21□□□□□ -2.06
VPS52Q8N1B4 Y_RNA.143-201ENST00000363520 106 ntBASIC2.21□□□□□ -2.06
VPS52Q8N1B4 SNORD114-6-201ENST00000364393 72 ntBASIC2.21□□□□□ -2.06
VPS52Q8N1B4 Y_RNA.459-201ENST00000384251 102 ntBASIC2.21□□□□□ -2.06
VPS52Q8N1B4 RNU6-1105P-201ENST00000384774 107 ntBASIC2.21□□□□□ -2.06
VPS52Q8N1B4 SNORD115-46-201ENST00000390982 71 ntBASIC2.21□□□□□ -2.06
VPS52Q8N1B4 RNU6-1109P-201ENST00000391187 107 ntBASIC2.21□□□□□ -2.06
VPS52Q8N1B4 RNA5SP475-201ENST00000410568 110 ntBASIC2.21□□□□□ -2.06
VPS52Q8N1B4 RNU5A-5P-201ENST00000411054 116 ntBASIC2.21□□□□□ -2.06
VPS52Q8N1B4 AL390729.2-201ENST00000416137 156 ntBASIC2.21□□□□□ -2.06
VPS52Q8N1B4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.21□□□□□ -2.06
VPS52Q8N1B4 RNU6-717P-201ENST00000459076 104 ntBASIC2.21□□□□□ -2.06
VPS52Q8N1B4 MRPS17P9-201ENST00000511924 393 ntBASIC2.21□□□□□ -2.06
VPS52Q8N1B4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.21□□□□□ -2.06
VPS52Q8N1B4 RNU6-1143P-201ENST00000516125 104 ntBASIC2.21□□□□□ -2.06
VPS52Q8N1B4 RNA5SP458-201ENST00000516188 119 ntBASIC2.21□□□□□ -2.06
VPS52Q8N1B4 RNU1-40P-201ENST00000516816 164 ntBASIC2.21□□□□□ -2.06
VPS52Q8N1B4 RNU1-97P-201ENST00000516872 164 ntBASIC2.21□□□□□ -2.06
VPS52Q8N1B4 SNORA31.25-201ENST00000517242 134 ntBASIC2.21□□□□□ -2.06
VPS52Q8N1B4 AC025647.1-201ENST00000517879 253 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms