Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
USP48Q86UV5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.42□□□□□ -1.86
USP48Q86UV5 AC108206.1-201ENST00000570186 4159 ntBASIC3.42□□□□□ -1.86
USP48Q86UV5 RNU1-23P-201ENST00000363361 144 ntBASIC3.42□□□□□ -1.86
USP48Q86UV5 RNA5SP68-201ENST00000363885 119 ntBASIC3.42□□□□□ -1.86
USP48Q86UV5 SNORD115-30-201ENST00000364117 82 ntBASIC3.42□□□□□ -1.86
USP48Q86UV5 RNU1-112P-201ENST00000364401 164 ntBASIC3.42□□□□□ -1.86
USP48Q86UV5 Y_RNA.243-201ENST00000364481 109 ntBASIC3.42□□□□□ -1.86
USP48Q86UV5 Y_RNA.435-201ENST00000384095 112 ntBASIC3.42□□□□□ -1.86
USP48Q86UV5 MIR548I2-201ENST00000408348 149 ntBASIC3.42□□□□□ -1.86
USP48Q86UV5 AC003685.2-201ENST00000422795 395 ntBASIC3.42□□□□□ -1.86
USP48Q86UV5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.42□□□□□ -1.86
USP48Q86UV5 AC016925.1-201ENST00000458303 298 ntBASIC3.42□□□□□ -1.86
USP48Q86UV5 RNU7-57P-201ENST00000459540 60 ntBASIC3.42□□□□□ -1.86
USP48Q86UV5 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.42□□□□□ -1.86
USP48Q86UV5 Y_RNA.662-201ENST00000516028 97 ntBASIC3.42□□□□□ -1.86
USP48Q86UV5 RNU7-200P-201ENST00000516105 62 ntBASIC3.42□□□□□ -1.86
USP48Q86UV5 RNU6-1278P-201ENST00000516130 107 ntBASIC3.42□□□□□ -1.86
USP48Q86UV5 RNU6-436P-201ENST00000516171 114 ntBASIC3.42□□□□□ -1.86
USP48Q86UV5 MIR3144-201ENST00000579460 79 ntBASIC3.42□□□□□ -1.86
USP48Q86UV5 SNORD53-201ENST00000579969 78 ntBASIC3.42□□□□□ -1.86
USP48Q86UV5 AL365265.1-201ENST00000621045 234 ntBASIC3.42□□□□□ -1.86
USP48Q86UV5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
USP48Q86UV5 Y_RNA.304-201ENST00000365011 112 ntBASIC3.41□□□□□ -1.86
USP48Q86UV5 RNY1P5-201ENST00000383890 115 ntBASIC3.41□□□□□ -1.86
USP48Q86UV5 RNU6-211P-201ENST00000384047 107 ntBASIC3.41□□□□□ -1.86
USP48Q86UV5 RNU6-975P-201ENST00000384296 105 ntBASIC3.41□□□□□ -1.86
USP48Q86UV5 MIR181A2-201ENST00000384863 110 ntBASIC3.41□□□□□ -1.86
USP48Q86UV5 MIR627-201ENST00000384979 97 ntBASIC3.41□□□□□ -1.86
USP48Q86UV5 MIR504-201ENST00000385065 83 ntBASIC3.41□□□□□ -1.86
USP48Q86UV5 MIR561-201ENST00000385216 97 ntBASIC3.41□□□□□ -1.86
USP48Q86UV5 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
USP48Q86UV5 AL031003.1-201ENST00000404229 172 ntBASIC3.41□□□□□ -1.86
USP48Q86UV5 RNA5SP344-201ENST00000411081 104 ntBASIC3.41□□□□□ -1.86
USP48Q86UV5 AL606753.1-201ENST00000427435 87 ntBASIC3.41□□□□□ -1.86
USP48Q86UV5 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.41□□□□□ -1.86
USP48Q86UV5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.41□□□□□ -1.86
USP48Q86UV5 RNA5SP490-201ENST00000517141 136 ntBASIC3.41□□□□□ -1.86
USP48Q86UV5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.41□□□□□ -1.86
USP48Q86UV5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.41□□□□□ -1.86
USP48Q86UV5 AL008718.3-201ENST00000610217 321 ntBASIC3.41□□□□□ -1.86
USP48Q86UV5 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.41□□□□□ -1.86
USP48Q86UV5 snoZ196.1-201ENST00000625269 89 ntBASIC3.41□□□□□ -1.86
USP48Q86UV5 MIR6733-201ENST00000635723 61 ntBASIC3.41□□□□□ -1.86
USP48Q86UV5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.41□□□□□ -1.86
USP48Q86UV5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
USP48Q86UV5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.4□□□□□ -1.87
USP48Q86UV5 AC091021.1-201ENST00000468051 388 ntBASIC3.4□□□□□ -1.87
USP48Q86UV5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
USP48Q86UV5 RNA5SP24-201ENST00000516478 95 ntBASIC3.4□□□□□ -1.87
USP48Q86UV5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.4□□□□□ -1.87
USP48Q86UV5 AC104465.1-201ENST00000611365 139 ntBASIC3.4□□□□□ -1.87
USP48Q86UV5 MIR6817-201ENST00000615588 66 ntBASIC3.4□□□□□ -1.87
USP48Q86UV5 AC064859.1-201ENST00000624741 174 ntBASIC3.4□□□□□ -1.87
USP48Q86UV5 U6.115-201ENST00000636045 103 ntBASIC3.4□□□□□ -1.87
USP48Q86UV5 AC132825.6-201ENST00000638861 357 ntBASIC3.4□□□□□ -1.87
USP48Q86UV5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
USP48Q86UV5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
USP48Q86UV5 AC009487.4-201ENST00000624969 3585 ntBASIC3.4□□□□□ -1.87
USP48Q86UV5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
USP48Q86UV5 RNU6-859P-201ENST00000362728 107 ntBASIC3.39□□□□□ -1.87
USP48Q86UV5 HMGN2P18-201ENST00000450680 270 ntBASIC3.39□□□□□ -1.87
USP48Q86UV5 Y_RNA.637-201ENST00000459424 114 ntBASIC3.39□□□□□ -1.87
USP48Q86UV5 RNU6-948P-201ENST00000516374 107 ntBASIC3.39□□□□□ -1.87
USP48Q86UV5 RNA5SP148-201ENST00000516527 94 ntBASIC3.39□□□□□ -1.87
USP48Q86UV5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
USP48Q86UV5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
USP48Q86UV5 AC068700.1-201ENST00000565862 3754 ntBASIC3.39□□□□□ -1.87
USP48Q86UV5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
USP48Q86UV5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USP48Q86UV5 RNU6-743P-201ENST00000364151 106 ntBASIC3.38□□□□□ -1.87
USP48Q86UV5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
USP48Q86UV5 Y_RNA.398-201ENST00000383952 99 ntBASIC3.38□□□□□ -1.87
USP48Q86UV5 Y_RNA.441-201ENST00000384123 112 ntBASIC3.38□□□□□ -1.87
USP48Q86UV5 AL138827.1-201ENST00000402666 306 ntBASIC3.38□□□□□ -1.87
USP48Q86UV5 RNU6-710P-201ENST00000410424 105 ntBASIC3.38□□□□□ -1.87
USP48Q86UV5 AL445687.1-201ENST00000439946 251 ntBASIC3.38□□□□□ -1.87
USP48Q86UV5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.38□□□□□ -1.87
USP48Q86UV5 HMGB3P3-201ENST00000510526 400 ntBASIC3.38□□□□□ -1.87
USP48Q86UV5 SUMO2P18-201ENST00000518873 252 ntBASIC3.38□□□□□ -1.87
USP48Q86UV5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.38□□□□□ -1.87
USP48Q86UV5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
USP48Q86UV5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.38□□□□□ -1.87
USP48Q86UV5 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
USP48Q86UV5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.37□□□□□ -1.87
USP48Q86UV5 U8.2-201ENST00000363156 134 ntBASIC3.37□□□□□ -1.87
USP48Q86UV5 SNORA67.4-201ENST00000384688 142 ntBASIC3.37□□□□□ -1.87
USP48Q86UV5 RNU5E-9P-201ENST00000411164 104 ntBASIC3.37□□□□□ -1.87
USP48Q86UV5 RNU6-57P-201ENST00000411348 103 ntBASIC3.37□□□□□ -1.87
USP48Q86UV5 AL135790.2-201ENST00000437701 267 ntBASIC3.37□□□□□ -1.87
USP48Q86UV5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
USP48Q86UV5 RNU6-221P-201ENST00000459541 99 ntBASIC3.37□□□□□ -1.87
USP48Q86UV5 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.37□□□□□ -1.87
USP48Q86UV5 SNORA70.12-201ENST00000516084 153 ntBASIC3.37□□□□□ -1.87
USP48Q86UV5 MIR5692C2-201ENST00000577959 77 ntBASIC3.37□□□□□ -1.87
USP48Q86UV5 AC090616.3-201ENST00000582184 217 ntBASIC3.37□□□□□ -1.87
USP48Q86UV5 AC090115.4-201ENST00000609970 188 ntBASIC3.37□□□□□ -1.87
USP48Q86UV5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
USP48Q86UV5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP48Q86UV5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms