Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 AC019176.2-201ENST00000611579 315 ntBASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 AF117829.1-206ENST00000621883 3802 ntBASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LYSMD3Q7Z3D4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LYSMD3Q7Z3D4 MT-TI-201ENST00000387365 69 ntBASIC3.69□□□□□ -1.82
LYSMD3Q7Z3D4 Y_RNA.621-201ENST00000411065 96 ntBASIC3.69□□□□□ -1.82
LYSMD3Q7Z3D4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.69□□□□□ -1.82
LYSMD3Q7Z3D4 RNU6-904P-201ENST00000516206 101 ntBASIC3.69□□□□□ -1.82
LYSMD3Q7Z3D4 RNU1-95P-201ENST00000516357 160 ntBASIC3.69□□□□□ -1.82
LYSMD3Q7Z3D4 RNA5SP309-201ENST00000516670 106 ntBASIC3.69□□□□□ -1.82
LYSMD3Q7Z3D4 RNU1-128P-201ENST00000516704 160 ntBASIC3.69□□□□□ -1.82
LYSMD3Q7Z3D4 MIR376A2-201ENST00000636782 80 ntBASIC3.69□□□□□ -1.82
LYSMD3Q7Z3D4 AP000553.6-201ENST00000641242 118 ntBASIC3.69□□□□□ -1.82
LYSMD3Q7Z3D4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.69□□□□□ -1.82
LYSMD3Q7Z3D4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LYSMD3Q7Z3D4 AC093010.3-201ENST00000570269 15214 ntBASIC3.68□□□□□ -1.82
LYSMD3Q7Z3D4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LYSMD3Q7Z3D4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
LYSMD3Q7Z3D4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.68□□□□□ -1.82
LYSMD3Q7Z3D4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
LYSMD3Q7Z3D4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LYSMD3Q7Z3D4 SNORA63.1-201ENST00000362493 131 ntBASIC3.68□□□□□ -1.82
LYSMD3Q7Z3D4 SNORA73.2-201ENST00000364946 201 ntBASIC3.68□□□□□ -1.82
LYSMD3Q7Z3D4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.68□□□□□ -1.82
LYSMD3Q7Z3D4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.68□□□□□ -1.82
LYSMD3Q7Z3D4 AC107297.1-201ENST00000459991 176 ntBASIC3.68□□□□□ -1.82
LYSMD3Q7Z3D4 HMGN1P7-201ENST00000491722 313 ntBASIC3.68□□□□□ -1.82
LYSMD3Q7Z3D4 AC103810.1-201ENST00000579873 453 ntBASIC3.68□□□□□ -1.82
LYSMD3Q7Z3D4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.68□□□□□ -1.82
LYSMD3Q7Z3D4 AC090115.4-201ENST00000609970 188 ntBASIC3.68□□□□□ -1.82
LYSMD3Q7Z3D4 AC025521.1-201ENST00000621624 286 ntBASIC3.68□□□□□ -1.82
LYSMD3Q7Z3D4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
LYSMD3Q7Z3D4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
LYSMD3Q7Z3D4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
LYSMD3Q7Z3D4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 RNY1P10-201ENST00000363268 113 ntBASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 RNA5SP51-201ENST00000364750 119 ntBASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 RNU6-1134P-201ENST00000365156 101 ntBASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 RNU6-438P-201ENST00000365561 103 ntBASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 MIR759-201ENST00000390224 91 ntBASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 AL035423.1-201ENST00000420331 213 ntBASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 RPS29P31-201ENST00000446147 164 ntBASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 RNU2-34P-201ENST00000516534 121 ntBASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 AC026421.1-201ENST00000519101 163 ntBASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 AC068657.1-201ENST00000520807 306 ntBASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 AC084364.2-201ENST00000546924 395 ntBASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 MIR5197-201ENST00000583721 112 ntBASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
LYSMD3Q7Z3D4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 MIR302B-201ENST00000362188 73 ntBASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 MIR208A-201ENST00000362287 71 ntBASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 RNU6-486P-201ENST00000363116 107 ntBASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 Y_RNA.342-201ENST00000365352 113 ntBASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 Y_RNA.344-201ENST00000365381 112 ntBASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 SNORA5A-201ENST00000384111 134 ntBASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 MIR184-201ENST00000384962 84 ntBASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 MIR520G-201ENST00000385064 90 ntBASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 AL159169.1-201ENST00000421119 127 ntBASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 SNRPGP10-201ENST00000432323 225 ntBASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 PGBD4P5-201ENST00000445958 426 ntBASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 RN7SKP83-201ENST00000516512 178 ntBASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 RN7SKP282-201ENST00000516824 299 ntBASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 AC008507.4-201ENST00000585464 127 ntBASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 RNVU1-4-201ENST00000612985 164 ntBASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 AL590808.1-201ENST00000618696 141 ntBASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 AC009093.8-201ENST00000641769 292 ntBASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
LYSMD3Q7Z3D4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
LYSMD3Q7Z3D4 RNA5SP387-201ENST00000364226 106 ntBASIC3.65□□□□□ -1.83
LYSMD3Q7Z3D4 Y_RNA.333-201ENST00000365274 102 ntBASIC3.65□□□□□ -1.83
LYSMD3Q7Z3D4 MIR518F-201ENST00000384973 87 ntBASIC3.65□□□□□ -1.83
LYSMD3Q7Z3D4 RNA5SP38-201ENST00000410750 119 ntBASIC3.65□□□□□ -1.83
LYSMD3Q7Z3D4 SNRPGP13-201ENST00000442212 177 ntBASIC3.65□□□□□ -1.83
LYSMD3Q7Z3D4 RNU7-170P-201ENST00000459303 61 ntBASIC3.65□□□□□ -1.83
LYSMD3Q7Z3D4 MIR4765-201ENST00000585007 77 ntBASIC3.65□□□□□ -1.83
LYSMD3Q7Z3D4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.65□□□□□ -1.83
LYSMD3Q7Z3D4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LYSMD3Q7Z3D4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms