Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
RNF111Q6ZNA4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RNF111Q6ZNA4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.07□□□□□ -1.92
RNF111Q6ZNA4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 RNU6-1082P-201ENST00000364574 107 ntBASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 RNA5SP267-201ENST00000364893 126 ntBASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 RNU6-1336P-201ENST00000383886 109 ntBASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 RNU6-44P-201ENST00000384045 107 ntBASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 SNORA75.5-201ENST00000391291 81 ntBASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 SNORA79-201ENST00000408376 140 ntBASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 AC016909.1-201ENST00000415916 166 ntBASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 AC010531.2-201ENST00000465012 153 ntBASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 SCARNA11.3-201ENST00000517276 130 ntBASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 AC120024.3-201ENST00000603167 156 ntBASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 MIR1248-201ENST00000629190 106 ntBASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
RNF111Q6ZNA4 AL391516.1-201ENST00000554380 2449 ntBASIC3.05□□□□□ -1.92
RNF111Q6ZNA4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RNF111Q6ZNA4 RNU6-674P-201ENST00000363831 107 ntBASIC3.05□□□□□ -1.92
RNF111Q6ZNA4 RNU6-1235P-201ENST00000384559 107 ntBASIC3.05□□□□□ -1.92
RNF111Q6ZNA4 RNVU1-14-201ENST00000384770 164 ntBASIC3.05□□□□□ -1.92
RNF111Q6ZNA4 RN7SKP101-201ENST00000411376 320 ntBASIC3.05□□□□□ -1.92
RNF111Q6ZNA4 AL035461.1-201ENST00000421490 332 ntBASIC3.05□□□□□ -1.92
RNF111Q6ZNA4 HMGN2P18-201ENST00000450680 270 ntBASIC3.05□□□□□ -1.92
RNF111Q6ZNA4 RNU6-498P-201ENST00000459468 107 ntBASIC3.05□□□□□ -1.92
RNF111Q6ZNA4 SNORD59.2-201ENST00000516873 68 ntBASIC3.05□□□□□ -1.92
RNF111Q6ZNA4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.05□□□□□ -1.92
RNF111Q6ZNA4 MIR378D2-201ENST00000580636 98 ntBASIC3.05□□□□□ -1.92
RNF111Q6ZNA4 MIR3199-1-201ENST00000582434 88 ntBASIC3.05□□□□□ -1.92
RNF111Q6ZNA4 AL049861.1-201ENST00000603130 150 ntBASIC3.05□□□□□ -1.92
RNF111Q6ZNA4 AC093732.2-201ENST00000607950 274 ntBASIC3.05□□□□□ -1.92
RNF111Q6ZNA4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
RNF111Q6ZNA4 MIR7515-201ENST00000637837 67 ntBASIC3.05□□□□□ -1.92
RNF111Q6ZNA4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RNF111Q6ZNA4 CENPCP1-201ENST00000533085 2578 ntBASIC3.05□□□□□ -1.92
RNF111Q6ZNA4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 RNU6-743P-201ENST00000364151 106 ntBASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 Y_RNA.251-201ENST00000364551 99 ntBASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 RNU6-915P-201ENST00000364943 103 ntBASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 RNU6-1240P-201ENST00000365155 104 ntBASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 CD24P4-201ENST00000382840 243 ntBASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 MIR591-201ENST00000385290 95 ntBASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 RNU1-101P-201ENST00000391171 127 ntBASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 RNA5SP496-201ENST00000391240 109 ntBASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 AC008134.1-201ENST00000420943 193 ntBASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 AC005326.1-201ENST00000429197 123 ntBASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 AP004217.1-201ENST00000480579 346 ntBASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 RN7SKP43-201ENST00000516173 320 ntBASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 AC090142.3-201ENST00000519012 385 ntBASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 AC018630.3-201ENST00000542637 96 ntBASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 AL929325.1-201ENST00000603096 117 ntBASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 AP001340.1-201ENST00000624405 217 ntBASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 MIR6733-201ENST00000635723 61 ntBASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
RNF111Q6ZNA4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
RNF111Q6ZNA4 MIR208A-201ENST00000362287 71 ntBASIC3.03□□□□□ -1.92
RNF111Q6ZNA4 RNU6-117P-201ENST00000365415 107 ntBASIC3.03□□□□□ -1.92
RNF111Q6ZNA4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RNF111Q6ZNA4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.03□□□□□ -1.92
RNF111Q6ZNA4 RNU6-1080P-201ENST00000383982 107 ntBASIC3.03□□□□□ -1.92
RNF111Q6ZNA4 RNU2-32P-201ENST00000411193 191 ntBASIC3.03□□□□□ -1.92
RNF111Q6ZNA4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.03□□□□□ -1.92
RNF111Q6ZNA4 RPS29P6-201ENST00000438196 145 ntBASIC3.03□□□□□ -1.92
RNF111Q6ZNA4 AC006028.1-201ENST00000438379 402 ntBASIC3.03□□□□□ -1.92
RNF111Q6ZNA4 RNA5SP490-201ENST00000517141 136 ntBASIC3.03□□□□□ -1.92
RNF111Q6ZNA4 U7.2-201ENST00000607576 63 ntBASIC3.03□□□□□ -1.92
RNF111Q6ZNA4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.03□□□□□ -1.92
RNF111Q6ZNA4 AC006435.5-201ENST00000624486 112 ntBASIC3.03□□□□□ -1.92
RNF111Q6ZNA4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RNF111Q6ZNA4 AP003122.5-201ENST00000527668 3766 ntBASIC3.03□□□□□ -1.92
RNF111Q6ZNA4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RNF111Q6ZNA4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
RNF111Q6ZNA4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RNF111Q6ZNA4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
RNF111Q6ZNA4 RNU6-1325P-201ENST00000364905 105 ntBASIC3.02□□□□□ -1.93
RNF111Q6ZNA4 SNORA70.4-201ENST00000365509 134 ntBASIC3.02□□□□□ -1.93
RNF111Q6ZNA4 Y_RNA.525-201ENST00000384570 113 ntBASIC3.02□□□□□ -1.93
RNF111Q6ZNA4 RNA5SP120-201ENST00000410900 112 ntBASIC3.02□□□□□ -1.93
RNF111Q6ZNA4 RNU7-107P-201ENST00000459121 61 ntBASIC3.02□□□□□ -1.93
RNF111Q6ZNA4 snoU13.22-201ENST00000459428 104 ntBASIC3.02□□□□□ -1.93
RNF111Q6ZNA4 RNU6-659P-201ENST00000516454 104 ntBASIC3.02□□□□□ -1.93
RNF111Q6ZNA4 RNU6-919P-201ENST00000516731 104 ntBASIC3.02□□□□□ -1.93
RNF111Q6ZNA4 SCARNA3-201ENST00000517097 143 ntBASIC3.02□□□□□ -1.93
RNF111Q6ZNA4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms