Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC004965.1-201ENST00000413033 213 ntBASIC1.47□□□□□ -2.17
CASC4Q6P4E1 UBE2V1P7-201ENST00000446395 340 ntBASIC1.47□□□□□ -2.17
CASC4Q6P4E1 MRPS10P1-201ENST00000448483 130 ntBASIC1.47□□□□□ -2.17
CASC4Q6P4E1 AC245517.4-201ENST00000448601 281 ntBASIC1.47□□□□□ -2.17
CASC4Q6P4E1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.47□□□□□ -2.17
CASC4Q6P4E1 SNORD13-201ENST00000459299 104 ntBASIC1.47□□□□□ -2.17
CASC4Q6P4E1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.47□□□□□ -2.17
CASC4Q6P4E1 RNU7-99P-201ENST00000516271 62 ntBASIC1.47□□□□□ -2.17
CASC4Q6P4E1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.47□□□□□ -2.17
CASC4Q6P4E1 SNORA31.24-201ENST00000517232 57 ntBASIC1.47□□□□□ -2.17
CASC4Q6P4E1 AC019176.1-201ENST00000518519 225 ntBASIC1.47□□□□□ -2.17
CASC4Q6P4E1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.47□□□□□ -2.17
CASC4Q6P4E1 AC023157.2-201ENST00000540596 141 ntBASIC1.47□□□□□ -2.17
CASC4Q6P4E1 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.47□□□□□ -2.17
CASC4Q6P4E1 AL161722.3-201ENST00000605789 2983 ntBASIC1.47□□□□□ -2.17
CASC4Q6P4E1 AC104260.1-201ENST00000616660 539 ntBASIC1.47□□□□□ -2.17
CASC4Q6P4E1 Y_RNA.646-201ENST00000410980 101 ntBASIC1.46□□□□□ -2.18
CASC4Q6P4E1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.46□□□□□ -2.18
CASC4Q6P4E1 RPS27P16-201ENST00000425758 201 ntBASIC1.46□□□□□ -2.18
CASC4Q6P4E1 AC027119.1-201ENST00000440877 241 ntBASIC1.46□□□□□ -2.18
CASC4Q6P4E1 SNRPGP13-201ENST00000442212 177 ntBASIC1.46□□□□□ -2.18
CASC4Q6P4E1 RPS27P22-201ENST00000478056 241 ntBASIC1.46□□□□□ -2.18
CASC4Q6P4E1 AC010469.2-201ENST00000496412 480 ntBASIC1.46□□□□□ -2.18
CASC4Q6P4E1 AC010598.1-201ENST00000510378 103 ntBASIC1.46□□□□□ -2.18
CASC4Q6P4E1 SNORA20.3-201ENST00000516880 132 ntBASIC1.46□□□□□ -2.18
CASC4Q6P4E1 RNU6-902P-201ENST00000517212 91 ntBASIC1.46□□□□□ -2.18
CASC4Q6P4E1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.46□□□□□ -2.18
CASC4Q6P4E1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.46□□□□□ -2.18
CASC4Q6P4E1 AP001485.1-201ENST00000604799 199 ntBASIC1.46□□□□□ -2.18
CASC4Q6P4E1 AC021506.2-201ENST00000612354 169 ntBASIC1.46□□□□□ -2.18
CASC4Q6P4E1 RNU6-1188P-201ENST00000363795 107 ntBASIC1.45□□□□□ -2.18
CASC4Q6P4E1 Y_RNA.474-201ENST00000384341 102 ntBASIC1.45□□□□□ -2.18
CASC4Q6P4E1 RNU6-310P-201ENST00000384655 107 ntBASIC1.45□□□□□ -2.18
CASC4Q6P4E1 AL355796.1-201ENST00000406706 323 ntBASIC1.45□□□□□ -2.18
CASC4Q6P4E1 RNU6-1304P-201ENST00000411374 106 ntBASIC1.45□□□□□ -2.18
CASC4Q6P4E1 AC245047.3-201ENST00000429428 127 ntBASIC1.45□□□□□ -2.18
CASC4Q6P4E1 PCNPP5-201ENST00000452246 481 ntBASIC1.45□□□□□ -2.18
CASC4Q6P4E1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.45□□□□□ -2.18
CASC4Q6P4E1 AC079140.2-201ENST00000506193 142 ntBASIC1.45□□□□□ -2.18
CASC4Q6P4E1 AC074133.1-201ENST00000515696 183 ntBASIC1.45□□□□□ -2.18
CASC4Q6P4E1 RN7SKP49-201ENST00000516675 260 ntBASIC1.45□□□□□ -2.18
CASC4Q6P4E1 AC018448.1-201ENST00000552843 316 ntBASIC1.45□□□□□ -2.18
CASC4Q6P4E1 MIR4524B-201ENST00000581569 115 ntBASIC1.45□□□□□ -2.18
CASC4Q6P4E1 AL390123.1-201ENST00000603216 237 ntBASIC1.45□□□□□ -2.18
CASC4Q6P4E1 PRR13P7-201ENST00000605538 430 ntBASIC1.45□□□□□ -2.18
CASC4Q6P4E1 AL353997.5-201ENST00000618886 171 ntBASIC1.45□□□□□ -2.18
CASC4Q6P4E1 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.45□□□□□ -2.18
CASC4Q6P4E1 MIR8054-201ENST00000620877 86 ntBASIC1.45□□□□□ -2.18
CASC4Q6P4E1 AC006435.5-201ENST00000624486 112 ntBASIC1.45□□□□□ -2.18
CASC4Q6P4E1 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.45□□□□□ -2.18
CASC4Q6P4E1 MTND5P10-201ENST00000603719 1809 ntBASIC1.45□□□□□ -2.18
CASC4Q6P4E1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.44□□□□□ -2.18
CASC4Q6P4E1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CASC4Q6P4E1 AC073544.1-201ENST00000600110 1595 ntBASIC1.44□□□□□ -2.18
CASC4Q6P4E1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CASC4Q6P4E1 RNU6-60P-201ENST00000364792 103 ntBASIC1.44□□□□□ -2.18
CASC4Q6P4E1 Y_RNA.390-201ENST00000383932 102 ntBASIC1.44□□□□□ -2.18
CASC4Q6P4E1 SNORA20B-201ENST00000384220 132 ntBASIC1.44□□□□□ -2.18
CASC4Q6P4E1 RNU6-950P-201ENST00000384651 107 ntBASIC1.44□□□□□ -2.18
CASC4Q6P4E1 RNU6-1031P-201ENST00000384773 107 ntBASIC1.44□□□□□ -2.18
CASC4Q6P4E1 SNORA12.1-201ENST00000390873 148 ntBASIC1.44□□□□□ -2.18
CASC4Q6P4E1 RNU6-482P-201ENST00000391068 107 ntBASIC1.44□□□□□ -2.18
CASC4Q6P4E1 MRPL42P3-201ENST00000401492 326 ntBASIC1.44□□□□□ -2.18
CASC4Q6P4E1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.44□□□□□ -2.18
CASC4Q6P4E1 AC138393.2-201ENST00000414742 246 ntBASIC1.44□□□□□ -2.18
CASC4Q6P4E1 SDAD1P3-201ENST00000427380 333 ntBASIC1.44□□□□□ -2.18
CASC4Q6P4E1 AC098614.3-201ENST00000438957 440 ntBASIC1.44□□□□□ -2.18
CASC4Q6P4E1 RPS29P23-201ENST00000458635 123 ntBASIC1.44□□□□□ -2.18
CASC4Q6P4E1 PRDX4P1-201ENST00000507189 574 ntBASIC1.44□□□□□ -2.18
CASC4Q6P4E1 AP002001.1-203ENST00000534002 267 ntBASIC1.44□□□□□ -2.18
CASC4Q6P4E1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.44□□□□□ -2.18
CASC4Q6P4E1 AC099654.14-201ENST00000638599 341 ntBASIC1.44□□□□□ -2.18
CASC4Q6P4E1 ZNF72P-201ENST00000425869 1908 ntBASIC1.44□□□□□ -2.18
CASC4Q6P4E1 RNU1-17P-201ENST00000363022 152 ntBASIC1.43□□□□□ -2.18
CASC4Q6P4E1 RNU6-1283P-201ENST00000365314 105 ntBASIC1.43□□□□□ -2.18
CASC4Q6P4E1 MIR513A1-201ENST00000385138 129 ntBASIC1.43□□□□□ -2.18
CASC4Q6P4E1 MIR764-201ENST00000390811 85 ntBASIC1.43□□□□□ -2.18
CASC4Q6P4E1 RNU6-440P-201ENST00000390882 105 ntBASIC1.43□□□□□ -2.18
CASC4Q6P4E1 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.43□□□□□ -2.18
CASC4Q6P4E1 SNORA75.6-201ENST00000391318 127 ntBASIC1.43□□□□□ -2.18
CASC4Q6P4E1 MIR2053-201ENST00000459295 91 ntBASIC1.43□□□□□ -2.18
CASC4Q6P4E1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.43□□□□□ -2.18
CASC4Q6P4E1 SNORA40.9-201ENST00000515895 93 ntBASIC1.43□□□□□ -2.18
CASC4Q6P4E1 RNA5SP61-201ENST00000516453 100 ntBASIC1.43□□□□□ -2.18
CASC4Q6P4E1 AL160236.1-201ENST00000556317 195 ntBASIC1.43□□□□□ -2.18
CASC4Q6P4E1 MIR3937-201ENST00000580135 106 ntBASIC1.43□□□□□ -2.18
CASC4Q6P4E1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CASC4Q6P4E1 AC073413.2-201ENST00000604332 360 ntBASIC1.43□□□□□ -2.18
CASC4Q6P4E1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CASC4Q6P4E1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
CASC4Q6P4E1 MIR410-201ENST00000362222 80 ntBASIC1.42□□□□□ -2.18
CASC4Q6P4E1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.42□□□□□ -2.18
CASC4Q6P4E1 RNU6-1301P-201ENST00000362724 104 ntBASIC1.42□□□□□ -2.18
CASC4Q6P4E1 SNORD33-201ENST00000362761 85 ntBASIC1.42□□□□□ -2.18
CASC4Q6P4E1 RNU1-22P-201ENST00000363334 158 ntBASIC1.42□□□□□ -2.18
CASC4Q6P4E1 RNU6-890P-201ENST00000384121 107 ntBASIC1.42□□□□□ -2.18
CASC4Q6P4E1 Y_RNA.498-201ENST00000384460 102 ntBASIC1.42□□□□□ -2.18
CASC4Q6P4E1 RN7SKP200-201ENST00000410564 320 ntBASIC1.42□□□□□ -2.18
CASC4Q6P4E1 RNU6-625P-201ENST00000459412 107 ntBASIC1.42□□□□□ -2.18
CASC4Q6P4E1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms