Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.59□□□□□ -1.84
PRPF40BQ6NWY9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
PRPF40BQ6NWY9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.59□□□□□ -1.84
PRPF40BQ6NWY9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.58□□□□□ -1.84
PRPF40BQ6NWY9 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.58□□□□□ -1.84
PRPF40BQ6NWY9 AC009487.2-201ENST00000420969 6821 ntBASIC3.58□□□□□ -1.84
PRPF40BQ6NWY9 Y_RNA.124-201ENST00000363339 93 ntBASIC3.58□□□□□ -1.84
PRPF40BQ6NWY9 SNORD14D-201ENST00000384390 87 ntBASIC3.58□□□□□ -1.84
PRPF40BQ6NWY9 RNU6-1274P-201ENST00000384557 107 ntBASIC3.58□□□□□ -1.84
PRPF40BQ6NWY9 Y_RNA.572-201ENST00000384757 98 ntBASIC3.58□□□□□ -1.84
PRPF40BQ6NWY9 MIR616-201ENST00000385293 97 ntBASIC3.58□□□□□ -1.84
PRPF40BQ6NWY9 AL121914.1-201ENST00000450188 156 ntBASIC3.58□□□□□ -1.84
PRPF40BQ6NWY9 RAC1P5-201ENST00000512182 576 ntBASIC3.58□□□□□ -1.84
PRPF40BQ6NWY9 RN7SKP43-201ENST00000516173 320 ntBASIC3.58□□□□□ -1.84
PRPF40BQ6NWY9 AC109810.1-201ENST00000534066 224 ntBASIC3.58□□□□□ -1.84
PRPF40BQ6NWY9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRPF40BQ6NWY9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PRPF40BQ6NWY9 RNU6-271P-201ENST00000363858 105 ntBASIC3.57□□□□□ -1.84
PRPF40BQ6NWY9 RNU6-234P-201ENST00000365229 104 ntBASIC3.57□□□□□ -1.84
PRPF40BQ6NWY9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PRPF40BQ6NWY9 RNU6-144P-201ENST00000383951 107 ntBASIC3.57□□□□□ -1.84
PRPF40BQ6NWY9 RNU2-51P-201ENST00000410708 197 ntBASIC3.57□□□□□ -1.84
PRPF40BQ6NWY9 AC009969.1-201ENST00000438726 172 ntBASIC3.57□□□□□ -1.84
PRPF40BQ6NWY9 RPL23AP7-203ENST00000449021 469 ntBASIC3.57□□□□□ -1.84
PRPF40BQ6NWY9 RNU1-41P-201ENST00000516161 162 ntBASIC3.57□□□□□ -1.84
PRPF40BQ6NWY9 RNU1-48P-201ENST00000516400 162 ntBASIC3.57□□□□□ -1.84
PRPF40BQ6NWY9 RNU6-586P-201ENST00000517265 104 ntBASIC3.57□□□□□ -1.84
PRPF40BQ6NWY9 AC068700.1-201ENST00000565862 3754 ntBASIC3.57□□□□□ -1.84
PRPF40BQ6NWY9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.57□□□□□ -1.84
PRPF40BQ6NWY9 AL391903.3-201ENST00000612158 163 ntBASIC3.57□□□□□ -1.84
PRPF40BQ6NWY9 MIR548AY-201ENST00000617669 107 ntBASIC3.57□□□□□ -1.84
PRPF40BQ6NWY9 AC002064.3-201ENST00000623448 346 ntBASIC3.57□□□□□ -1.84
PRPF40BQ6NWY9 snoZ196.1-201ENST00000625269 89 ntBASIC3.57□□□□□ -1.84
PRPF40BQ6NWY9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.57□□□□□ -1.84
PRPF40BQ6NWY9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PRPF40BQ6NWY9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PRPF40BQ6NWY9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PRPF40BQ6NWY9 RNU6-199P-201ENST00000362954 107 ntBASIC3.56□□□□□ -1.84
PRPF40BQ6NWY9 RNU6-407P-201ENST00000365280 104 ntBASIC3.56□□□□□ -1.84
PRPF40BQ6NWY9 RNU4-11P-201ENST00000365287 132 ntBASIC3.56□□□□□ -1.84
PRPF40BQ6NWY9 RNU6-376P-201ENST00000384731 106 ntBASIC3.56□□□□□ -1.84
PRPF40BQ6NWY9 MIR513C-201ENST00000401352 84 ntBASIC3.56□□□□□ -1.84
PRPF40BQ6NWY9 RNU6-57P-201ENST00000411348 103 ntBASIC3.56□□□□□ -1.84
PRPF40BQ6NWY9 MIR548X2-201ENST00000579776 100 ntBASIC3.56□□□□□ -1.84
PRPF40BQ6NWY9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PRPF40BQ6NWY9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRPF40BQ6NWY9 SNORD114-7-201ENST00000362520 77 ntBASIC3.55□□□□□ -1.84
PRPF40BQ6NWY9 RNU6-944P-201ENST00000364023 107 ntBASIC3.55□□□□□ -1.84
PRPF40BQ6NWY9 SNORA20B-201ENST00000384220 132 ntBASIC3.55□□□□□ -1.84
PRPF40BQ6NWY9 RNU6-959P-201ENST00000384671 107 ntBASIC3.55□□□□□ -1.84
PRPF40BQ6NWY9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.55□□□□□ -1.84
PRPF40BQ6NWY9 AC006461.1-201ENST00000412637 326 ntBASIC3.55□□□□□ -1.84
PRPF40BQ6NWY9 AL513328.1-201ENST00000446460 224 ntBASIC3.55□□□□□ -1.84
PRPF40BQ6NWY9 AC117454.1-201ENST00000491120 168 ntBASIC3.55□□□□□ -1.84
PRPF40BQ6NWY9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.55□□□□□ -1.84
PRPF40BQ6NWY9 RNU6-453P-201ENST00000516819 85 ntBASIC3.55□□□□□ -1.84
PRPF40BQ6NWY9 AC109329.2-201ENST00000519658 482 ntBASIC3.55□□□□□ -1.84
PRPF40BQ6NWY9 AC027419.1-201ENST00000522976 328 ntBASIC3.55□□□□□ -1.84
PRPF40BQ6NWY9 AC022616.8-201ENST00000533569 253 ntBASIC3.55□□□□□ -1.84
PRPF40BQ6NWY9 DNAJC19P2-201ENST00000593340 302 ntBASIC3.55□□□□□ -1.84
PRPF40BQ6NWY9 AP003122.5-201ENST00000527668 3766 ntBASIC3.55□□□□□ -1.84
PRPF40BQ6NWY9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRPF40BQ6NWY9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRPF40BQ6NWY9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.55□□□□□ -1.84
PRPF40BQ6NWY9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 RNU6-859P-201ENST00000362728 107 ntBASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 Y_RNA.337-201ENST00000365312 102 ntBASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 AL355796.1-201ENST00000406706 323 ntBASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 HSPE1P13-201ENST00000451143 297 ntBASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 AL137159.1-201ENST00000452808 512 ntBASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 AC010409.1-201ENST00000487382 476 ntBASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 SEM1P1-201ENST00000506694 209 ntBASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 SNORA25.12-201ENST00000516202 82 ntBASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 RNU6-313P-201ENST00000516317 112 ntBASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 RNU6-1337P-201ENST00000516525 95 ntBASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 MIR5688-201ENST00000580619 83 ntBASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 AC023043.3-201ENST00000593113 385 ntBASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF40BQ6NWY9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PRPF40BQ6NWY9 Y_RNA.172-201ENST00000363765 102 ntBASIC3.53□□□□□ -1.84
PRPF40BQ6NWY9 Y_RNA.229-201ENST00000364347 113 ntBASIC3.53□□□□□ -1.84
PRPF40BQ6NWY9 U8.7-201ENST00000364940 136 ntBASIC3.53□□□□□ -1.84
PRPF40BQ6NWY9 RNU6-438P-201ENST00000365561 103 ntBASIC3.53□□□□□ -1.84
PRPF40BQ6NWY9 RNU6-22P-201ENST00000384355 107 ntBASIC3.53□□□□□ -1.84
PRPF40BQ6NWY9 MIR569-201ENST00000385228 96 ntBASIC3.53□□□□□ -1.84
PRPF40BQ6NWY9 SNORD37.2-201ENST00000391075 66 ntBASIC3.53□□□□□ -1.84
PRPF40BQ6NWY9 MIR887-201ENST00000401258 79 ntBASIC3.53□□□□□ -1.84
PRPF40BQ6NWY9 RPL30P13-201ENST00000418873 348 ntBASIC3.53□□□□□ -1.84
PRPF40BQ6NWY9 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.53□□□□□ -1.84
PRPF40BQ6NWY9 AP004217.1-201ENST00000480579 346 ntBASIC3.53□□□□□ -1.84
PRPF40BQ6NWY9 SCARNA8-201ENST00000515924 131 ntBASIC3.53□□□□□ -1.84
PRPF40BQ6NWY9 AC004832.5-201ENST00000608677 401 ntBASIC3.53□□□□□ -1.84
PRPF40BQ6NWY9 AL590808.1-201ENST00000618696 141 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms