Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 EDDM3CP-201ENST00000415977 425 ntBASIC1.99□□□□□ -2.09
TRNP1Q6NT89 MTCO1P44-201ENST00000441935 243 ntBASIC1.99□□□□□ -2.09
TRNP1Q6NT89 HMGB3P3-201ENST00000510526 400 ntBASIC1.99□□□□□ -2.09
TRNP1Q6NT89 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.99□□□□□ -2.09
TRNP1Q6NT89 AP003733.2-201ENST00000529409 171 ntBASIC1.99□□□□□ -2.09
TRNP1Q6NT89 AL031274.2-201ENST00000599419 203 ntBASIC1.99□□□□□ -2.09
TRNP1Q6NT89 AC011373.1-201ENST00000607270 237 ntBASIC1.99□□□□□ -2.09
TRNP1Q6NT89 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.99□□□□□ -2.09
TRNP1Q6NT89 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.99□□□□□ -2.09
TRNP1Q6NT89 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.99□□□□□ -2.09
TRNP1Q6NT89 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.98□□□□□ -2.09
TRNP1Q6NT89 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRNP1Q6NT89 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRNP1Q6NT89 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TRNP1Q6NT89 LINC02555-201ENST00000563933 1951 ntBASIC1.98□□□□□ -2.09
TRNP1Q6NT89 Y_RNA.149-201ENST00000363558 117 ntBASIC1.98□□□□□ -2.09
TRNP1Q6NT89 SNORA3A-201ENST00000364113 130 ntBASIC1.98□□□□□ -2.09
TRNP1Q6NT89 SNORD115-46-201ENST00000390982 71 ntBASIC1.98□□□□□ -2.09
TRNP1Q6NT89 SRIP3-201ENST00000413200 219 ntBASIC1.98□□□□□ -2.09
TRNP1Q6NT89 AC114982.1-201ENST00000469402 321 ntBASIC1.98□□□□□ -2.09
TRNP1Q6NT89 RPS29P11-201ENST00000496507 171 ntBASIC1.98□□□□□ -2.09
TRNP1Q6NT89 RNU6-948P-201ENST00000516374 107 ntBASIC1.98□□□□□ -2.09
TRNP1Q6NT89 Y_RNA.713-201ENST00000517013 96 ntBASIC1.98□□□□□ -2.09
TRNP1Q6NT89 AC110588.1-201ENST00000559699 137 ntBASIC1.98□□□□□ -2.09
TRNP1Q6NT89 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.98□□□□□ -2.09
TRNP1Q6NT89 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.98□□□□□ -2.09
TRNP1Q6NT89 AL590240.4-201ENST00000616908 390 ntBASIC1.98□□□□□ -2.09
TRNP1Q6NT89 snoZ196.1-201ENST00000625269 89 ntBASIC1.98□□□□□ -2.09
TRNP1Q6NT89 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRNP1Q6NT89 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
TRNP1Q6NT89 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.97□□□□□ -2.09
TRNP1Q6NT89 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TRNP1Q6NT89 snoU2_19.2-201ENST00000363024 80 ntBASIC1.97□□□□□ -2.09
TRNP1Q6NT89 RNU6-1310P-201ENST00000384153 107 ntBASIC1.97□□□□□ -2.09
TRNP1Q6NT89 Y_RNA.446-201ENST00000384178 104 ntBASIC1.97□□□□□ -2.09
TRNP1Q6NT89 Y_RNA.570-201ENST00000384750 101 ntBASIC1.97□□□□□ -2.09
TRNP1Q6NT89 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TRNP1Q6NT89 RNU5A-5P-201ENST00000411054 116 ntBASIC1.97□□□□□ -2.09
TRNP1Q6NT89 AL731563.1-201ENST00000442202 214 ntBASIC1.97□□□□□ -2.09
TRNP1Q6NT89 AC079804.2-201ENST00000490376 200 ntBASIC1.97□□□□□ -2.09
TRNP1Q6NT89 HMGB3P17-201ENST00000504195 649 ntBASIC1.97□□□□□ -2.09
TRNP1Q6NT89 RNU6-155P-201ENST00000516347 100 ntBASIC1.97□□□□□ -2.09
TRNP1Q6NT89 AP005660.1-201ENST00000522972 293 ntBASIC1.97□□□□□ -2.09
TRNP1Q6NT89 MYL12BP1-201ENST00000569826 507 ntBASIC1.97□□□□□ -2.09
TRNP1Q6NT89 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.97□□□□□ -2.09
TRNP1Q6NT89 PRR13P7-201ENST00000605538 430 ntBASIC1.97□□□□□ -2.09
TRNP1Q6NT89 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.97□□□□□ -2.09
TRNP1Q6NT89 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.97□□□□□ -2.09
TRNP1Q6NT89 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
TRNP1Q6NT89 RNU6-1164P-201ENST00000364428 107 ntBASIC1.96□□□□□ -2.1
TRNP1Q6NT89 Y_RNA.276-201ENST00000364732 109 ntBASIC1.96□□□□□ -2.1
TRNP1Q6NT89 Y_RNA.331-201ENST00000365267 102 ntBASIC1.96□□□□□ -2.1
TRNP1Q6NT89 Y_RNA.376-201ENST00000365638 108 ntBASIC1.96□□□□□ -2.1
TRNP1Q6NT89 RNU6-21P-201ENST00000384710 107 ntBASIC1.96□□□□□ -2.1
TRNP1Q6NT89 RNU6-713P-201ENST00000384761 107 ntBASIC1.96□□□□□ -2.1
TRNP1Q6NT89 RNU6-1199P-201ENST00000411249 104 ntBASIC1.96□□□□□ -2.1
TRNP1Q6NT89 OOSP1P1-201ENST00000423265 274 ntBASIC1.96□□□□□ -2.1
TRNP1Q6NT89 SUMO1P4-201ENST00000429430 302 ntBASIC1.96□□□□□ -2.1
TRNP1Q6NT89 TOMM22P2-201ENST00000430735 237 ntBASIC1.96□□□□□ -2.1
TRNP1Q6NT89 MTCYBP9-201ENST00000431021 303 ntBASIC1.96□□□□□ -2.1
TRNP1Q6NT89 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.96□□□□□ -2.1
TRNP1Q6NT89 AC074290.1-201ENST00000448883 135 ntBASIC1.96□□□□□ -2.1
TRNP1Q6NT89 MTCO2P24-201ENST00000515611 426 ntBASIC1.96□□□□□ -2.1
TRNP1Q6NT89 RNU1-104P-201ENST00000517280 175 ntBASIC1.96□□□□□ -2.1
TRNP1Q6NT89 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.96□□□□□ -2.1
TRNP1Q6NT89 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.96□□□□□ -2.1
TRNP1Q6NT89 AC026271.5-201ENST00000577873 130 ntBASIC1.96□□□□□ -2.1
TRNP1Q6NT89 MIR4423-201ENST00000580922 80 ntBASIC1.96□□□□□ -2.1
TRNP1Q6NT89 MIR4503-201ENST00000582187 83 ntBASIC1.96□□□□□ -2.1
TRNP1Q6NT89 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.96□□□□□ -2.1
TRNP1Q6NT89 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.96□□□□□ -2.1
TRNP1Q6NT89 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TRNP1Q6NT89 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
TRNP1Q6NT89 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TRNP1Q6NT89 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TRNP1Q6NT89 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TRNP1Q6NT89 Y_RNA.16-201ENST00000362421 102 ntBASIC1.95□□□□□ -2.1
TRNP1Q6NT89 SNORD81.1-201ENST00000363064 77 ntBASIC1.95□□□□□ -2.1
TRNP1Q6NT89 Y_RNA.396-201ENST00000383949 103 ntBASIC1.95□□□□□ -2.1
TRNP1Q6NT89 SNORD63-201ENST00000384262 68 ntBASIC1.95□□□□□ -2.1
TRNP1Q6NT89 Y_RNA.462-201ENST00000384268 102 ntBASIC1.95□□□□□ -2.1
TRNP1Q6NT89 MIR9-3-201ENST00000385084 90 ntBASIC1.95□□□□□ -2.1
TRNP1Q6NT89 MT-TW-201ENST00000387382 68 ntBASIC1.95□□□□□ -2.1
TRNP1Q6NT89 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
TRNP1Q6NT89 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
TRNP1Q6NT89 AC016909.1-201ENST00000415916 166 ntBASIC1.95□□□□□ -2.1
TRNP1Q6NT89 AC060773.1-201ENST00000421698 310 ntBASIC1.95□□□□□ -2.1
TRNP1Q6NT89 BX510359.4-201ENST00000423750 193 ntBASIC1.95□□□□□ -2.1
TRNP1Q6NT89 NDUFB4P10-201ENST00000452541 359 ntBASIC1.95□□□□□ -2.1
TRNP1Q6NT89 RNU6-1041P-201ENST00000516254 102 ntBASIC1.95□□□□□ -2.1
TRNP1Q6NT89 AC025647.1-201ENST00000517879 253 ntBASIC1.95□□□□□ -2.1
TRNP1Q6NT89 IGLV3-17-201ENST00000519099 244 ntBASIC1.95□□□□□ -2.1
TRNP1Q6NT89 MIR3145-201ENST00000580727 82 ntBASIC1.95□□□□□ -2.1
TRNP1Q6NT89 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
TRNP1Q6NT89 AC008749.1-201ENST00000597650 306 ntBASIC1.95□□□□□ -2.1
TRNP1Q6NT89 AC022441.3-201ENST00000605737 136 ntBASIC1.95□□□□□ -2.1
TRNP1Q6NT89 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
TRNP1Q6NT89 AL159152.1-201ENST00000635019 2587 ntBASIC1.95□□□□□ -2.1
TRNP1Q6NT89 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
TRNP1Q6NT89 MIR410-201ENST00000362222 80 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms