Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC100770.1-201ENST00000532310 322 ntBASIC4.39□□□□□ -1.71
VARS2Q5ST30 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.39□□□□□ -1.71
VARS2Q5ST30 AL353149.1-201ENST00000610667 244 ntBASIC4.39□□□□□ -1.71
VARS2Q5ST30 AL136964.1-201ENST00000622038 2990 ntBASIC4.39□□□□□ -1.71
VARS2Q5ST30 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
VARS2Q5ST30 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
VARS2Q5ST30 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VARS2Q5ST30 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
VARS2Q5ST30 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VARS2Q5ST30 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
VARS2Q5ST30 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
VARS2Q5ST30 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.38□□□□□ -1.71
VARS2Q5ST30 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VARS2Q5ST30 RNU6-649P-201ENST00000384463 107 ntBASIC4.38□□□□□ -1.71
VARS2Q5ST30 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.38□□□□□ -1.71
VARS2Q5ST30 RNU7-153P-201ENST00000516455 62 ntBASIC4.38□□□□□ -1.71
VARS2Q5ST30 IFITM8P-201ENST00000522529 394 ntBASIC4.38□□□□□ -1.71
VARS2Q5ST30 AC079598.5-201ENST00000547460 117 ntBASIC4.38□□□□□ -1.71
VARS2Q5ST30 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.38□□□□□ -1.71
VARS2Q5ST30 MIR548AE2-201ENST00000583456 67 ntBASIC4.38□□□□□ -1.71
VARS2Q5ST30 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC4.38□□□□□ -1.71
VARS2Q5ST30 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.38□□□□□ -1.71
VARS2Q5ST30 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC4.38□□□□□ -1.71
VARS2Q5ST30 AC006504.1-201ENST00000562493 3666 ntBASIC4.38□□□□□ -1.71
VARS2Q5ST30 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC4.38□□□□□ -1.71
VARS2Q5ST30 ANKRD18EP-201ENST00000405487 2632 ntBASIC4.38□□□□□ -1.71
VARS2Q5ST30 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VARS2Q5ST30 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VARS2Q5ST30 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
VARS2Q5ST30 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VARS2Q5ST30 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.37□□□□□ -1.71
VARS2Q5ST30 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VARS2Q5ST30 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
VARS2Q5ST30 AL161912.2-201ENST00000565707 3007 ntBASIC4.37□□□□□ -1.71
VARS2Q5ST30 MIRLET7A1-201ENST00000362295 80 ntBASIC4.37□□□□□ -1.71
VARS2Q5ST30 RNA5SP119-201ENST00000362715 117 ntBASIC4.37□□□□□ -1.71
VARS2Q5ST30 SNORD14E-201ENST00000364009 85 ntBASIC4.37□□□□□ -1.71
VARS2Q5ST30 RNU6-471P-201ENST00000383944 106 ntBASIC4.37□□□□□ -1.71
VARS2Q5ST30 RNU6-1258P-201ENST00000516911 111 ntBASIC4.37□□□□□ -1.71
VARS2Q5ST30 MIR5685-201ENST00000579080 79 ntBASIC4.37□□□□□ -1.71
VARS2Q5ST30 MIR5684-201ENST00000585074 65 ntBASIC4.37□□□□□ -1.71
VARS2Q5ST30 AC019176.2-201ENST00000611579 315 ntBASIC4.37□□□□□ -1.71
VARS2Q5ST30 AC012314.7-201ENST00000619693 93 ntBASIC4.37□□□□□ -1.71
VARS2Q5ST30 MIR7154-201ENST00000620673 73 ntBASIC4.37□□□□□ -1.71
VARS2Q5ST30 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
VARS2Q5ST30 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VARS2Q5ST30 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
VARS2Q5ST30 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
VARS2Q5ST30 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.36□□□□□ -1.71
VARS2Q5ST30 RNU11-5P-201ENST00000391216 129 ntBASIC4.36□□□□□ -1.71
VARS2Q5ST30 RNU6-557P-201ENST00000516842 110 ntBASIC4.36□□□□□ -1.71
VARS2Q5ST30 SCARNA3-201ENST00000517097 143 ntBASIC4.36□□□□□ -1.71
VARS2Q5ST30 SNORA70.24-201ENST00000517233 118 ntBASIC4.36□□□□□ -1.71
VARS2Q5ST30 IGHVIII-5-1-201ENST00000523059 99 ntBASIC4.36□□□□□ -1.71
VARS2Q5ST30 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VARS2Q5ST30 AL606490.9-201ENST00000603331 271 ntBASIC4.36□□□□□ -1.71
VARS2Q5ST30 MIR6500-201ENST00000622700 86 ntBASIC4.36□□□□□ -1.71
VARS2Q5ST30 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VARS2Q5ST30 AC092881.1-201ENST00000638218 2733 ntBASIC4.36□□□□□ -1.71
VARS2Q5ST30 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VARS2Q5ST30 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VARS2Q5ST30 RNU1-15P-201ENST00000353977 144 ntBASIC4.35□□□□□ -1.71
VARS2Q5ST30 SNORA60-201ENST00000362396 134 ntBASIC4.35□□□□□ -1.71
VARS2Q5ST30 RNU6-800P-201ENST00000384473 103 ntBASIC4.35□□□□□ -1.71
VARS2Q5ST30 MIR634-201ENST00000385208 97 ntBASIC4.35□□□□□ -1.71
VARS2Q5ST30 RN7SKP177-201ENST00000410567 355 ntBASIC4.35□□□□□ -1.71
VARS2Q5ST30 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.35□□□□□ -1.71
VARS2Q5ST30 AC025750.2-201ENST00000442609 450 ntBASIC4.35□□□□□ -1.71
VARS2Q5ST30 SNORA59A-201ENST00000459326 152 ntBASIC4.35□□□□□ -1.71
VARS2Q5ST30 RNU6-998P-201ENST00000515894 101 ntBASIC4.35□□□□□ -1.71
VARS2Q5ST30 RNU6-341P-201ENST00000516973 96 ntBASIC4.35□□□□□ -1.71
VARS2Q5ST30 RNU6-448P-201ENST00000517052 107 ntBASIC4.35□□□□□ -1.71
VARS2Q5ST30 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.35□□□□□ -1.71
VARS2Q5ST30 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.35□□□□□ -1.71
VARS2Q5ST30 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VARS2Q5ST30 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
VARS2Q5ST30 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
VARS2Q5ST30 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
VARS2Q5ST30 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
VARS2Q5ST30 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
VARS2Q5ST30 AC011266.1-201ENST00000624119 3569 ntBASIC4.34□□□□□ -1.71
VARS2Q5ST30 SNORD115-39-201ENST00000363694 82 ntBASIC4.34□□□□□ -1.71
VARS2Q5ST30 RNU6-499P-201ENST00000365615 107 ntBASIC4.34□□□□□ -1.71
VARS2Q5ST30 Y_RNA.470-201ENST00000384307 117 ntBASIC4.34□□□□□ -1.71
VARS2Q5ST30 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.34□□□□□ -1.71
VARS2Q5ST30 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.34□□□□□ -1.71
VARS2Q5ST30 RPL29P14-201ENST00000495837 428 ntBASIC4.34□□□□□ -1.71
VARS2Q5ST30 RNU6-687P-201ENST00000516443 89 ntBASIC4.34□□□□□ -1.71
VARS2Q5ST30 IGLV3-26-201ENST00000520756 302 ntBASIC4.34□□□□□ -1.71
VARS2Q5ST30 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC4.34□□□□□ -1.71
VARS2Q5ST30 MIR3200-201ENST00000580767 85 ntBASIC4.34□□□□□ -1.71
VARS2Q5ST30 MIR6868-201ENST00000611215 58 ntBASIC4.34□□□□□ -1.71
VARS2Q5ST30 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.34□□□□□ -1.71
VARS2Q5ST30 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VARS2Q5ST30 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VARS2Q5ST30 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.34□□□□□ -1.72
VARS2Q5ST30 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.34□□□□□ -1.72
VARS2Q5ST30 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VARS2Q5ST30 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
VARS2Q5ST30 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms