Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.8□□□□□ -2.12
SNAI3Q3KNW1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.8□□□□□ -2.12
SNAI3Q3KNW1 AC022616.8-201ENST00000533569 253 ntBASIC1.8□□□□□ -2.12
SNAI3Q3KNW1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.8□□□□□ -2.12
SNAI3Q3KNW1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.8□□□□□ -2.12
SNAI3Q3KNW1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.8□□□□□ -2.12
SNAI3Q3KNW1 AC005176.2-201ENST00000596933 147 ntBASIC1.8□□□□□ -2.12
SNAI3Q3KNW1 SNORD113-5-201ENST00000607261 78 ntBASIC1.8□□□□□ -2.12
SNAI3Q3KNW1 AC127459.3-201ENST00000624328 466 ntBASIC1.8□□□□□ -2.12
SNAI3Q3KNW1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
SNAI3Q3KNW1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SNAI3Q3KNW1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 Y_RNA.16-201ENST00000362421 102 ntBASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 Y_RNA.237-201ENST00000364439 102 ntBASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 Y_RNA.286-201ENST00000364813 102 ntBASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 RNU6-1175P-201ENST00000365200 107 ntBASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 Y_RNA.350-201ENST00000365409 98 ntBASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 SNORA64-201ENST00000384674 134 ntBASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 MIR1294-201ENST00000408503 142 ntBASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 RNU4-30P-201ENST00000410245 143 ntBASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 AL139156.1-201ENST00000412785 841 ntBASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 RAB28P5-201ENST00000427490 651 ntBASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 AL356320.1-201ENST00000429616 163 ntBASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 PRELID3BP1-201ENST00000457142 540 ntBASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 AC025033.1-201ENST00000463883 194 ntBASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 AP002001.1-203ENST00000534002 267 ntBASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 AC012433.1-201ENST00000588916 398 ntBASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 AC022441.3-201ENST00000605737 136 ntBASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 AC011373.1-201ENST00000607270 237 ntBASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 SDR42E1P4-201ENST00000620894 481 ntBASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.79□□□□□ -2.12
SNAI3Q3KNW1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 RNU4-90P-201ENST00000362773 141 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 Y_RNA.101-201ENST00000363154 102 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 RNU6-379P-201ENST00000363813 104 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 SNORD87-201ENST00000364849 89 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 RNU6-1310P-201ENST00000384153 107 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 Y_RNA.476-201ENST00000384347 108 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 SNORA67.3-201ENST00000384366 140 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 SNORA40.19-201ENST00000390846 128 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 AL512604.1-201ENST00000404812 257 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 SNORA3.2-201ENST00000408221 125 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 MIR1262-201ENST00000408276 93 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 RNA5SP338-201ENST00000410495 85 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 Z98742.3-201ENST00000418637 326 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 NDUFB4P10-201ENST00000452541 359 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 RPL39P38-201ENST00000467018 153 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 MIR449C-201ENST00000516047 92 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 RNU6-1338P-201ENST00000516328 91 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 RNU5F-4P-201ENST00000516581 114 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 RNU7-110P-201ENST00000516891 62 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 DEFB108E-201ENST00000524692 240 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 MIR3128-201ENST00000581957 66 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 AC004467.1-201ENST00000615678 330 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 AL590808.1-201ENST00000618696 141 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 uc_338.20-201ENST00000621563 178 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 AC008873.1-201ENST00000625051 138 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 MIR3674-201ENST00000636576 68 ntBASIC1.78□□□□□ -2.12
SNAI3Q3KNW1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 AL391987.6-201ENST00000305671 199 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 RNU6-290P-201ENST00000365212 101 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 RNU6-234P-201ENST00000365229 104 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 RNU6-1264P-201ENST00000383891 107 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 RNU6-21P-201ENST00000384710 107 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 MIR586-201ENST00000385035 97 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 MIR676-201ENST00000390702 67 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 RNA5SP475-201ENST00000410568 110 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 RNU6-1199P-201ENST00000411249 104 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 RPL23AP36-201ENST00000413895 458 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 AL135786.1-201ENST00000415892 214 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 AC108059.2-201ENST00000434626 151 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 HMGB3P17-201ENST00000504195 649 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 RNU6-966P-201ENST00000516479 104 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 RNU1-40P-201ENST00000516816 164 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 RNU1-97P-201ENST00000516872 164 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 RNA5SP364-201ENST00000516938 78 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 RNU1-117P-201ENST00000517041 158 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 RNU6-794P-201ENST00000517261 64 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 MIR1273D-201ENST00000577266 86 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 Y_RNA.783-201ENST00000613546 102 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 AL590240.4-201ENST00000616908 390 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 AC091932.3-201ENST00000624223 323 ntBASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
SNAI3Q3KNW1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 U3.8-201ENST00000363675 217 ntBASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 RNA5SP138-201ENST00000365098 114 ntBASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 Y_RNA.446-201ENST00000384178 104 ntBASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 Y_RNA.489-201ENST00000384410 101 ntBASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 Y_RNA.500-201ENST00000384466 111 ntBASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 MIR548B-201ENST00000385247 97 ntBASIC1.76□□□□□ -2.13
SNAI3Q3KNW1 RN7SKP223-201ENST00000410582 62 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms