Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.54□□□□□ -2.32
SSX1Q16384 AC104332.1-201ENST00000440471 797 ntBASIC0.54□□□□□ -2.32
SSX1Q16384 MTCO2P7-201ENST00000446518 666 ntBASIC0.54□□□□□ -2.32
SSX1Q16384 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.54□□□□□ -2.32
SSX1Q16384 LINC01399-202ENST00000458450 244 ntBASIC0.54□□□□□ -2.32
SSX1Q16384 snoU13.25-201ENST00000458945 104 ntBASIC0.54□□□□□ -2.32
SSX1Q16384 RNU7-90P-201ENST00000459216 62 ntBASIC0.54□□□□□ -2.32
SSX1Q16384 AC091021.1-201ENST00000468051 388 ntBASIC0.54□□□□□ -2.32
SSX1Q16384 AC005840.1-201ENST00000498412 377 ntBASIC0.54□□□□□ -2.32
SSX1Q16384 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.54□□□□□ -2.32
SSX1Q16384 ACA59.1-201ENST00000515966 143 ntBASIC0.54□□□□□ -2.32
SSX1Q16384 Y_RNA.665-201ENST00000516177 98 ntBASIC0.54□□□□□ -2.32
SSX1Q16384 RNU2-56P-201ENST00000516826 190 ntBASIC0.54□□□□□ -2.32
SSX1Q16384 RNU6-341P-201ENST00000516973 96 ntBASIC0.54□□□□□ -2.32
SSX1Q16384 ZNF519P2-201ENST00000557032 169 ntBASIC0.54□□□□□ -2.32
SSX1Q16384 AL117336.2-201ENST00000602435 335 ntBASIC0.54□□□□□ -2.32
SSX1Q16384 AC004832.4-201ENST00000608952 331 ntBASIC0.54□□□□□ -2.32
SSX1Q16384 AL096861.1-201ENST00000610899 123 ntBASIC0.54□□□□□ -2.32
SSX1Q16384 AL138726.1-201ENST00000614873 333 ntBASIC0.54□□□□□ -2.32
SSX1Q16384 ELL2P3-201ENST00000457883 1602 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 MTND5P26-201ENST00000426018 1752 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 AL442644.1-201ENST00000454390 3105 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 MIRLET7C-201ENST00000362160 84 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 SNORA1B-201ENST00000362535 133 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 Y_RNA.77-201ENST00000362962 107 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 RNU6-1252P-201ENST00000363054 104 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 SNORA20B-201ENST00000384220 132 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 SNORD116-13-201ENST00000384408 92 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.53□□□□□ -2.32
SSX1Q16384 RPS26P5-201ENST00000418544 335 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.53□□□□□ -2.32
SSX1Q16384 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.53□□□□□ -2.32
SSX1Q16384 AC245047.8-201ENST00000456455 284 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 AP000870.1-201ENST00000472927 406 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 Y_RNA.693-201ENST00000516641 110 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 DEFB108E-201ENST00000524692 240 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 OSBPL9P5-201ENST00000542581 171 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 RPL21P9-201ENST00000556149 474 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.53□□□□□ -2.32
SSX1Q16384 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.53□□□□□ -2.32
SSX1Q16384 AC010525.2-201ENST00000590920 195 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 AC010620.1-201ENST00000601088 1102 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 AC063944.3-201ENST00000609969 533 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 AC010999.1-201ENST00000611856 324 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 AC078883.4-201ENST00000623218 367 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 CASC19-280ENST00000642102 1351 ntBASIC0.53□□□□□ -2.32
SSX1Q16384 Y_RNA.267-201ENST00000364679 109 ntBASIC0.52□□□□□ -2.33
SSX1Q16384 RNU6-1119P-201ENST00000384349 108 ntBASIC0.52□□□□□ -2.33
SSX1Q16384 MIR562-201ENST00000384894 95 ntBASIC0.52□□□□□ -2.33
SSX1Q16384 MTCO3P40-201ENST00000392516 676 ntBASIC0.52□□□□□ -2.33
SSX1Q16384 RNU6-733P-201ENST00000410759 104 ntBASIC0.52□□□□□ -2.33
SSX1Q16384 Y_RNA.615-201ENST00000410769 117 ntBASIC0.52□□□□□ -2.33
SSX1Q16384 AC243428.1-201ENST00000421099 264 ntBASIC0.52□□□□□ -2.33
SSX1Q16384 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.52□□□□□ -2.33
SSX1Q16384 RPEP5-201ENST00000441137 268 ntBASIC0.52□□□□□ -2.33
SSX1Q16384 AL049830.1-201ENST00000468034 425 ntBASIC0.52□□□□□ -2.33
SSX1Q16384 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.52□□□□□ -2.33
SSX1Q16384 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.52□□□□□ -2.33
SSX1Q16384 RNU6-107P-201ENST00000516643 102 ntBASIC0.52□□□□□ -2.33
SSX1Q16384 AC134698.4-201ENST00000523451 826 ntBASIC0.52□□□□□ -2.33
SSX1Q16384 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.52□□□□□ -2.33
SSX1Q16384 AC011604.1-201ENST00000545978 196 ntBASIC0.52□□□□□ -2.33
SSX1Q16384 MIR4298-201ENST00000584380 73 ntBASIC0.52□□□□□ -2.33
SSX1Q16384 AL353765.1-201ENST00000605514 183 ntBASIC0.52□□□□□ -2.33
SSX1Q16384 AC019193.3-201ENST00000609144 554 ntBASIC0.52□□□□□ -2.33
SSX1Q16384 AL391903.3-201ENST00000612158 163 ntBASIC0.52□□□□□ -2.33
SSX1Q16384 AC124864.2-201ENST00000624736 186 ntBASIC0.52□□□□□ -2.33
SSX1Q16384 RNA5SP482-201ENST00000391269 118 ntBASIC0.51□□□□□ -2.33
SSX1Q16384 AL035398.1-201ENST00000430869 322 ntBASIC0.51□□□□□ -2.33
SSX1Q16384 RNU7-66P-201ENST00000459469 62 ntBASIC0.51□□□□□ -2.33
SSX1Q16384 RNU7-175P-201ENST00000515915 61 ntBASIC0.51□□□□□ -2.33
SSX1Q16384 SNORA70.12-201ENST00000516084 153 ntBASIC0.51□□□□□ -2.33
SSX1Q16384 AP002004.2-201ENST00000531656 154 ntBASIC0.51□□□□□ -2.33
SSX1Q16384 AL512360.1-201ENST00000555346 234 ntBASIC0.51□□□□□ -2.33
SSX1Q16384 AC023934.1-201ENST00000574529 2389 ntBASIC0.51□□□□□ -2.33
SSX1Q16384 MTND1P15-201ENST00000579262 949 ntBASIC0.51□□□□□ -2.33
SSX1Q16384 MIR4781-201ENST00000585250 76 ntBASIC0.51□□□□□ -2.33
SSX1Q16384 AL359880.1-201ENST00000621879 266 ntBASIC0.51□□□□□ -2.33
SSX1Q16384 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
SSX1Q16384 Y_RNA.135-201ENST00000363439 95 ntBASIC0.5□□□□□ -2.33
SSX1Q16384 SNORD114-27-201ENST00000363766 70 ntBASIC0.5□□□□□ -2.33
SSX1Q16384 RNU6-281P-201ENST00000384212 103 ntBASIC0.5□□□□□ -2.33
SSX1Q16384 MIR526A1-201ENST00000384897 85 ntBASIC0.5□□□□□ -2.33
SSX1Q16384 FABP5P4-201ENST00000437203 171 ntBASIC0.5□□□□□ -2.33
SSX1Q16384 SEPT14P3-201ENST00000439401 183 ntBASIC0.5□□□□□ -2.33
SSX1Q16384 AL732372.2-207ENST00000445840 183 ntBASIC0.5□□□□□ -2.33
SSX1Q16384 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
SSX1Q16384 SEPT14P2-201ENST00000453405 183 ntBASIC0.5□□□□□ -2.33
SSX1Q16384 COX6CP6-201ENST00000490840 228 ntBASIC0.5□□□□□ -2.33
SSX1Q16384 AC018710.1-201ENST00000506509 158 ntBASIC0.5□□□□□ -2.33
SSX1Q16384 SEPT14P4-201ENST00000513445 186 ntBASIC0.5□□□□□ -2.33
SSX1Q16384 Y_RNA.683-201ENST00000516508 93 ntBASIC0.5□□□□□ -2.33
SSX1Q16384 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.5□□□□□ -2.33
SSX1Q16384 FO082796.1-201ENST00000523795 183 ntBASIC0.5□□□□□ -2.33
SSX1Q16384 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.5□□□□□ -2.33
SSX1Q16384 MIR3672-201ENST00000584290 82 ntBASIC0.5□□□□□ -2.33
SSX1Q16384 MIR3192-201ENST00000584920 77 ntBASIC0.5□□□□□ -2.33
SSX1Q16384 7SK.7-201ENST00000603504 247 ntBASIC0.5□□□□□ -2.33
SSX1Q16384 AC124303.1-201ENST00000605703 360 ntBASIC0.5□□□□□ -2.33
SSX1Q16384 RN7SKP299-201ENST00000606679 301 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms