Protein–RNA interactions for Protein: Q15012

LAPTM4A, Lysosomal-associated transmembrane protein 4A, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4AQ15012 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.85□□□□□ -1.79
LAPTM4AQ15012 AC022893.2-201ENST00000564832 3296 ntBASIC3.85□□□□□ -1.79
LAPTM4AQ15012 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LAPTM4AQ15012 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
LAPTM4AQ15012 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.84□□□□□ -1.79
LAPTM4AQ15012 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LAPTM4AQ15012 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LAPTM4AQ15012 AC007496.3-201ENST00000624987 3443 ntBASIC3.84□□□□□ -1.79
LAPTM4AQ15012 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LAPTM4AQ15012 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.84□□□□□ -1.79
LAPTM4AQ15012 RNA5SP332-201ENST00000391063 115 ntBASIC3.84□□□□□ -1.79
LAPTM4AQ15012 RNU6-630P-201ENST00000391258 106 ntBASIC3.84□□□□□ -1.79
LAPTM4AQ15012 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.84□□□□□ -1.79
LAPTM4AQ15012 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.84□□□□□ -1.79
LAPTM4AQ15012 PHBP16-201ENST00000446318 950 ntBASIC3.84□□□□□ -1.79
LAPTM4AQ15012 snoU13.4-201ENST00000458916 104 ntBASIC3.84□□□□□ -1.79
LAPTM4AQ15012 HMGB1P22-201ENST00000505315 124 ntBASIC3.84□□□□□ -1.79
LAPTM4AQ15012 RNU6-1073P-201ENST00000517182 106 ntBASIC3.84□□□□□ -1.79
LAPTM4AQ15012 RNU4-60P-201ENST00000517239 135 ntBASIC3.84□□□□□ -1.79
LAPTM4AQ15012 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.84□□□□□ -1.79
LAPTM4AQ15012 AC087685.1-201ENST00000587507 141 ntBASIC3.84□□□□□ -1.79
LAPTM4AQ15012 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.84□□□□□ -1.79
LAPTM4AQ15012 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.84□□□□□ -1.79
LAPTM4AQ15012 AC245060.5-201ENST00000610778 3293 ntBASIC3.84□□□□□ -1.79
LAPTM4AQ15012 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.84□□□□□ -1.8
LAPTM4AQ15012 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LAPTM4AQ15012 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LAPTM4AQ15012 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LAPTM4AQ15012 AC096644.4-201ENST00000563417 2912 ntBASIC3.83□□□□□ -1.8
LAPTM4AQ15012 Y_RNA.242-201ENST00000364473 110 ntBASIC3.83□□□□□ -1.8
LAPTM4AQ15012 Y_RNA.267-201ENST00000364679 109 ntBASIC3.83□□□□□ -1.8
LAPTM4AQ15012 MIR129-1-201ENST00000384972 72 ntBASIC3.83□□□□□ -1.8
LAPTM4AQ15012 HSPE1P12-201ENST00000412576 301 ntBASIC3.83□□□□□ -1.8
LAPTM4AQ15012 AL590139.1-201ENST00000416267 400 ntBASIC3.83□□□□□ -1.8
LAPTM4AQ15012 AL157831.1-201ENST00000426134 473 ntBASIC3.83□□□□□ -1.8
LAPTM4AQ15012 AC011998.1-201ENST00000433403 117 ntBASIC3.83□□□□□ -1.8
LAPTM4AQ15012 SNRPGP14-201ENST00000435400 219 ntBASIC3.83□□□□□ -1.8
LAPTM4AQ15012 AC092628.1-201ENST00000436250 252 ntBASIC3.83□□□□□ -1.8
LAPTM4AQ15012 AC009963.2-201ENST00000453431 138 ntBASIC3.83□□□□□ -1.8
LAPTM4AQ15012 U3.44-201ENST00000458938 192 ntBASIC3.83□□□□□ -1.8
LAPTM4AQ15012 RNU6-948P-201ENST00000516374 107 ntBASIC3.83□□□□□ -1.8
LAPTM4AQ15012 RNU6-807P-201ENST00000516805 107 ntBASIC3.83□□□□□ -1.8
LAPTM4AQ15012 AC103810.6-201ENST00000606708 136 ntBASIC3.83□□□□□ -1.8
LAPTM4AQ15012 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.83□□□□□ -1.8
LAPTM4AQ15012 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LAPTM4AQ15012 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.83□□□□□ -1.8
LAPTM4AQ15012 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
LAPTM4AQ15012 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
LAPTM4AQ15012 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
LAPTM4AQ15012 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LAPTM4AQ15012 Y_RNA.168-201ENST00000363740 102 ntBASIC3.82□□□□□ -1.8
LAPTM4AQ15012 RNU6-442P-201ENST00000383968 104 ntBASIC3.82□□□□□ -1.8
LAPTM4AQ15012 Y_RNA.494-201ENST00000384432 111 ntBASIC3.82□□□□□ -1.8
LAPTM4AQ15012 FTH1P12-201ENST00000432137 551 ntBASIC3.82□□□□□ -1.8
LAPTM4AQ15012 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.82□□□□□ -1.8
LAPTM4AQ15012 RNU7-2P-201ENST00000516096 62 ntBASIC3.82□□□□□ -1.8
LAPTM4AQ15012 RNA5SP519-201ENST00000516480 119 ntBASIC3.82□□□□□ -1.8
LAPTM4AQ15012 RNA5SP73-201ENST00000516744 108 ntBASIC3.82□□□□□ -1.8
LAPTM4AQ15012 Y_RNA.714-201ENST00000517065 90 ntBASIC3.82□□□□□ -1.8
LAPTM4AQ15012 MIR7978-201ENST00000636158 59 ntBASIC3.82□□□□□ -1.8
LAPTM4AQ15012 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.82□□□□□ -1.8
LAPTM4AQ15012 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.82□□□□□ -1.8
LAPTM4AQ15012 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.82□□□□□ -1.8
LAPTM4AQ15012 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.81□□□□□ -1.8
LAPTM4AQ15012 PWAR6-201ENST00000552334 4618 ntBASIC3.81□□□□□ -1.8
LAPTM4AQ15012 SNORD115-2-201ENST00000362842 82 ntBASIC3.81□□□□□ -1.8
LAPTM4AQ15012 Y_RNA.236-201ENST00000364427 111 ntBASIC3.81□□□□□ -1.8
LAPTM4AQ15012 SNORD115-20-201ENST00000365099 82 ntBASIC3.81□□□□□ -1.8
LAPTM4AQ15012 RNU6-1186P-201ENST00000410429 97 ntBASIC3.81□□□□□ -1.8
LAPTM4AQ15012 AC244098.2-201ENST00000422068 99 ntBASIC3.81□□□□□ -1.8
LAPTM4AQ15012 GOT2P5-201ENST00000433995 546 ntBASIC3.81□□□□□ -1.8
LAPTM4AQ15012 AL135938.1-201ENST00000443141 297 ntBASIC3.81□□□□□ -1.8
LAPTM4AQ15012 snoU13.24-201ENST00000458998 104 ntBASIC3.81□□□□□ -1.8
LAPTM4AQ15012 RNU7-34P-201ENST00000459394 64 ntBASIC3.81□□□□□ -1.8
LAPTM4AQ15012 RN7SL98P-201ENST00000462271 300 ntBASIC3.81□□□□□ -1.8
LAPTM4AQ15012 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.81□□□□□ -1.8
LAPTM4AQ15012 AL360157.1-201ENST00000565962 87 ntBASIC3.81□□□□□ -1.8
LAPTM4AQ15012 MIR4796-201ENST00000580742 81 ntBASIC3.81□□□□□ -1.8
LAPTM4AQ15012 ZNF861P-201ENST00000588126 639 ntBASIC3.81□□□□□ -1.8
LAPTM4AQ15012 RNU6-90P-201ENST00000606352 106 ntBASIC3.81□□□□□ -1.8
LAPTM4AQ15012 RNU1-30P-201ENST00000606575 163 ntBASIC3.81□□□□□ -1.8
LAPTM4AQ15012 MIR6820-201ENST00000611508 62 ntBASIC3.81□□□□□ -1.8
LAPTM4AQ15012 AC006065.5-201ENST00000623427 349 ntBASIC3.81□□□□□ -1.8
LAPTM4AQ15012 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.81□□□□□ -1.8
LAPTM4AQ15012 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LAPTM4AQ15012 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LAPTM4AQ15012 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LAPTM4AQ15012 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LAPTM4AQ15012 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
LAPTM4AQ15012 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LAPTM4AQ15012 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LAPTM4AQ15012 MFSD8-216ENST00000641147 4009 ntBASIC3.8□□□□□ -1.8
LAPTM4AQ15012 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.8□□□□□ -1.8
LAPTM4AQ15012 SNORD14E-201ENST00000364009 85 ntBASIC3.8□□□□□ -1.8
LAPTM4AQ15012 Y_RNA.508-201ENST00000384502 114 ntBASIC3.8□□□□□ -1.8
LAPTM4AQ15012 RNU6-205P-201ENST00000390858 107 ntBASIC3.8□□□□□ -1.8
LAPTM4AQ15012 AC244636.1-201ENST00000421152 228 ntBASIC3.8□□□□□ -1.8
LAPTM4AQ15012 SNORD4B-201ENST00000459083 72 ntBASIC3.8□□□□□ -1.8
LAPTM4AQ15012 AC109327.1-201ENST00000471666 403 ntBASIC3.8□□□□□ -1.8
LAPTM4AQ15012 RN7SL810P-201ENST00000493031 276 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms