Protein–RNA interactions for Protein: Q13011

ECH1, Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1Q13011 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.88□□□□□ -2.27
ECH1Q13011 AC010469.2-201ENST00000496412 480 ntBASIC0.88□□□□□ -2.27
ECH1Q13011 AC010598.1-201ENST00000510378 103 ntBASIC0.88□□□□□ -2.27
ECH1Q13011 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.88□□□□□ -2.27
ECH1Q13011 AC027419.1-201ENST00000522976 328 ntBASIC0.88□□□□□ -2.27
ECH1Q13011 AC109635.3-201ENST00000529536 185 ntBASIC0.88□□□□□ -2.27
ECH1Q13011 AC245505.1-201ENST00000556398 224 ntBASIC0.88□□□□□ -2.27
ECH1Q13011 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.88□□□□□ -2.27
ECH1Q13011 AC080078.3-201ENST00000605407 463 ntBASIC0.88□□□□□ -2.27
ECH1Q13011 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.88□□□□□ -2.27
ECH1Q13011 AC068137.4-201ENST00000638485 296 ntBASIC0.88□□□□□ -2.27
ECH1Q13011 ZNF299P-201ENST00000406845 1804 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 AL391516.1-201ENST00000554380 2449 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 RNU5F-3P-201ENST00000363767 117 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 Y_RNA.184-201ENST00000363884 108 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 RNU4-38P-201ENST00000364472 129 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 RNU4-76P-201ENST00000364509 141 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 RNU4-24P-201ENST00000364565 139 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 RNU6-53P-201ENST00000365367 106 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 RNU6-842P-201ENST00000384269 107 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 RNU6-831P-201ENST00000384548 107 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 RNU1-139P-201ENST00000391307 165 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 STAG3L5P-204ENST00000443759 179 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 AC048334.1-201ENST00000477975 159 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 SNORA31.2-201ENST00000516019 134 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 RNA5SP168-201ENST00000516642 112 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 RNU6-1314P-201ENST00000517139 104 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 SNORA70.22-201ENST00000517160 124 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 APOOP3-201ENST00000536787 586 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 MIR4778-201ENST00000577635 80 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 MIR4781-201ENST00000585250 76 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 GHRLOS.1-201ENST00000610995 70 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 MIR6079-201ENST00000635807 62 ntBASIC0.87□□□□□ -2.27
ECH1Q13011 RNU6-222P-201ENST00000362438 107 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 RNY4P14-201ENST00000363656 96 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 Y_RNA.164-201ENST00000363709 102 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 Y_RNA.363-201ENST00000365529 113 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 Y_RNA.402-201ENST00000383972 102 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 SNORA20B-201ENST00000384220 132 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 Y_RNA.490-201ENST00000384413 102 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 Y_RNA.554-201ENST00000384672 102 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 MIR19B1-201ENST00000384829 87 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 RNU6-373P-201ENST00000411247 98 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 USP9YP30-201ENST00000430729 455 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 CALM2P4-201ENST00000430810 426 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 RPS27P22-201ENST00000478056 241 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 OR9P1P-201ENST00000496431 281 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 AC097462.1-201ENST00000514125 324 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 RNU6-1114P-201ENST00000516022 107 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 RNU6-917P-201ENST00000516294 104 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 Y_RNA.683-201ENST00000516508 93 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 MIR4273-201ENST00000582824 84 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 7SK.7-201ENST00000603504 247 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 AL020996.3-201ENST00000606617 222 ntBASIC0.86□□□□□ -2.27
ECH1Q13011 RNU4-79P-201ENST00000362764 141 ntBASIC0.85□□□□□ -2.27
ECH1Q13011 RNU6-199P-201ENST00000362954 107 ntBASIC0.85□□□□□ -2.27
ECH1Q13011 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
ECH1Q13011 RNU6-424P-201ENST00000384367 105 ntBASIC0.85□□□□□ -2.27
ECH1Q13011 MIR181A1-201ENST00000385026 110 ntBASIC0.85□□□□□ -2.27
ECH1Q13011 RNU6-910P-201ENST00000390844 107 ntBASIC0.85□□□□□ -2.27
ECH1Q13011 U8.16-201ENST00000391279 133 ntBASIC0.85□□□□□ -2.27
ECH1Q13011 ELOCP21-201ENST00000412558 336 ntBASIC0.85□□□□□ -2.27
ECH1Q13011 MTCO3P19-201ENST00000415864 321 ntBASIC0.85□□□□□ -2.27
ECH1Q13011 MTND2P22-201ENST00000444325 1033 ntBASIC0.85□□□□□ -2.27
ECH1Q13011 MTND1P17-201ENST00000448961 204 ntBASIC0.85□□□□□ -2.27
ECH1Q13011 AC105758.1-201ENST00000506038 399 ntBASIC0.85□□□□□ -2.27
ECH1Q13011 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.85□□□□□ -2.27
ECH1Q13011 RNU6-273P-201ENST00000516937 96 ntBASIC0.85□□□□□ -2.27
ECH1Q13011 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.85□□□□□ -2.27
ECH1Q13011 AC090049.2-201ENST00000550377 109 ntBASIC0.85□□□□□ -2.27
ECH1Q13011 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.85□□□□□ -2.27
ECH1Q13011 AC091178.2-201ENST00000584401 117 ntBASIC0.85□□□□□ -2.27
ECH1Q13011 AC080078.2-201ENST00000603766 501 ntBASIC0.85□□□□□ -2.27
ECH1Q13011 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
ECH1Q13011 Y_RNA.48-201ENST00000362710 103 ntBASIC0.84□□□□□ -2.27
ECH1Q13011 Y_RNA.106-201ENST00000363189 100 ntBASIC0.84□□□□□ -2.27
ECH1Q13011 Y_RNA.301-201ENST00000364990 103 ntBASIC0.84□□□□□ -2.27
ECH1Q13011 MIR329-1-201ENST00000385028 80 ntBASIC0.84□□□□□ -2.27
ECH1Q13011 AC245047.7-201ENST00000440265 293 ntBASIC0.84□□□□□ -2.27
ECH1Q13011 SNORD5.1-201ENST00000458800 75 ntBASIC0.84□□□□□ -2.27
ECH1Q13011 RPS29P25-201ENST00000481709 171 ntBASIC0.84□□□□□ -2.27
ECH1Q13011 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.84□□□□□ -2.27
ECH1Q13011 AC046134.1-201ENST00000514454 666 ntBASIC0.84□□□□□ -2.27
ECH1Q13011 RNU6-107P-201ENST00000516643 102 ntBASIC0.84□□□□□ -2.27
ECH1Q13011 RNU6-566P-201ENST00000516790 107 ntBASIC0.84□□□□□ -2.27
ECH1Q13011 RNU7-172P-201ENST00000517125 64 ntBASIC0.84□□□□□ -2.27
ECH1Q13011 AC093023.1-201ENST00000547375 507 ntBASIC0.84□□□□□ -2.27
ECH1Q13011 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.84□□□□□ -2.27
ECH1Q13011 AC125232.2-201ENST00000592457 143 ntBASIC0.84□□□□□ -2.27
ECH1Q13011 SNORA28-201ENST00000606769 126 ntBASIC0.84□□□□□ -2.27
ECH1Q13011 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.84□□□□□ -2.27
ECH1Q13011 Y_RNA.89-201ENST00000363031 102 ntBASIC0.83□□□□□ -2.28
ECH1Q13011 SNORD114-27-201ENST00000363766 70 ntBASIC0.83□□□□□ -2.28
ECH1Q13011 USMG5P1-201ENST00000425964 177 ntBASIC0.83□□□□□ -2.28
ECH1Q13011 EIF1P2-201ENST00000428233 350 ntBASIC0.83□□□□□ -2.28
ECH1Q13011 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.83□□□□□ -2.28
ECH1Q13011 AC091021.1-201ENST00000468051 388 ntBASIC0.83□□□□□ -2.28
ECH1Q13011 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms