Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AL390123.1-201ENST00000603216 237 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 AC009229.3-201ENST00000608056 282 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.14□□□□□ -2.23
RAB40BQ12829 AC139792.2-201ENST00000624218 587 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 AC006435.5-201ENST00000624486 112 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 Y_RNA.72-201ENST00000362894 103 ntBASIC1.13□□□□□ -2.23
RAB40BQ12829 RPL37P10-201ENST00000412884 288 ntBASIC1.13□□□□□ -2.23
RAB40BQ12829 MTCYBP10-201ENST00000424905 650 ntBASIC1.13□□□□□ -2.23
RAB40BQ12829 MTND1P4-201ENST00000435196 415 ntBASIC1.13□□□□□ -2.23
RAB40BQ12829 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.13□□□□□ -2.23
RAB40BQ12829 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.13□□□□□ -2.23
RAB40BQ12829 RPS29P29-201ENST00000456396 171 ntBASIC1.13□□□□□ -2.23
RAB40BQ12829 RPL30P7-201ENST00000479312 323 ntBASIC1.13□□□□□ -2.23
RAB40BQ12829 AC018710.1-201ENST00000506509 158 ntBASIC1.13□□□□□ -2.23
RAB40BQ12829 RNU6-358P-201ENST00000516564 75 ntBASIC1.13□□□□□ -2.23
RAB40BQ12829 CYCSP23-201ENST00000519781 313 ntBASIC1.13□□□□□ -2.23
RAB40BQ12829 AC105029.1-201ENST00000520250 669 ntBASIC1.13□□□□□ -2.23
RAB40BQ12829 AC090821.2-201ENST00000523552 176 ntBASIC1.13□□□□□ -2.23
RAB40BQ12829 AL512310.8-201ENST00000550183 120 ntBASIC1.13□□□□□ -2.23
RAB40BQ12829 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.13□□□□□ -2.23
RAB40BQ12829 CYP3A52P-201ENST00000563326 91 ntBASIC1.13□□□□□ -2.23
RAB40BQ12829 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.13□□□□□ -2.23
RAB40BQ12829 AL645939.4-201ENST00000604495 135 ntBASIC1.13□□□□□ -2.23
RAB40BQ12829 AL021879.1-201ENST00000611756 288 ntBASIC1.13□□□□□ -2.23
RAB40BQ12829 AC084782.3-201ENST00000612282 578 ntBASIC1.13□□□□□ -2.23
RAB40BQ12829 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.13□□□□□ -2.23
RAB40BQ12829 ZNF209P-201ENST00000593450 2304 ntBASIC1.13□□□□□ -2.23
RAB40BQ12829 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
RAB40BQ12829 MIR378A-201ENST00000362177 66 ntBASIC1.12□□□□□ -2.23
RAB40BQ12829 RNU6-879P-201ENST00000364328 108 ntBASIC1.12□□□□□ -2.23
RAB40BQ12829 RNU6-1264P-201ENST00000383891 107 ntBASIC1.12□□□□□ -2.23
RAB40BQ12829 MIR329-1-201ENST00000385028 80 ntBASIC1.12□□□□□ -2.23
RAB40BQ12829 AL034345.1-201ENST00000407768 123 ntBASIC1.12□□□□□ -2.23
RAB40BQ12829 RNU4-62P-201ENST00000410125 130 ntBASIC1.12□□□□□ -2.23
RAB40BQ12829 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.12□□□□□ -2.23
RAB40BQ12829 PGBD4P5-201ENST00000445958 426 ntBASIC1.12□□□□□ -2.23
RAB40BQ12829 UBE2V1P7-201ENST00000446395 340 ntBASIC1.12□□□□□ -2.23
RAB40BQ12829 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.12□□□□□ -2.23
RAB40BQ12829 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.12□□□□□ -2.23
RAB40BQ12829 RPL7P42-201ENST00000481005 679 ntBASIC1.12□□□□□ -2.23
RAB40BQ12829 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.12□□□□□ -2.23
RAB40BQ12829 AC073413.2-201ENST00000604332 360 ntBASIC1.12□□□□□ -2.23
RAB40BQ12829 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.12□□□□□ -2.23
RAB40BQ12829 AC018630.2-201ENST00000534866 2403 ntBASIC1.12□□□□□ -2.23
RAB40BQ12829 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
RAB40BQ12829 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
RAB40BQ12829 RNA5SP361-201ENST00000362686 118 ntBASIC1.11□□□□□ -2.23
RAB40BQ12829 Y_RNA.482-201ENST00000384377 111 ntBASIC1.11□□□□□ -2.23
RAB40BQ12829 Y_RNA.557-201ENST00000384680 107 ntBASIC1.11□□□□□ -2.23
RAB40BQ12829 MIR150-201ENST00000385048 84 ntBASIC1.11□□□□□ -2.23
RAB40BQ12829 MTND3P10-201ENST00000450967 341 ntBASIC1.11□□□□□ -2.23
RAB40BQ12829 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.11□□□□□ -2.23
RAB40BQ12829 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.11□□□□□ -2.23
RAB40BQ12829 RAB11AP2-201ENST00000545905 639 ntBASIC1.11□□□□□ -2.23
RAB40BQ12829 AL161670.1-201ENST00000554348 137 ntBASIC1.11□□□□□ -2.23
RAB40BQ12829 DNAJC19P9-201ENST00000555084 351 ntBASIC1.11□□□□□ -2.23
RAB40BQ12829 AC019288.1-201ENST00000557918 224 ntBASIC1.11□□□□□ -2.23
RAB40BQ12829 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.11□□□□□ -2.23
RAB40BQ12829 AC104260.1-201ENST00000616660 539 ntBASIC1.11□□□□□ -2.23
RAB40BQ12829 PISRT1.1-201ENST00000616930 107 ntBASIC1.11□□□□□ -2.23
RAB40BQ12829 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
RAB40BQ12829 AC073544.1-201ENST00000600110 1595 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 RNU6-874P-201ENST00000362390 105 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 Y_RNA.88-201ENST00000363029 99 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 Y_RNA.339-201ENST00000365325 102 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 SNORA20B-201ENST00000384220 132 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 BTF3P4-201ENST00000418852 495 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 AC092423.1-201ENST00000430165 186 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 RPL23AP50-201ENST00000434149 455 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 STAG3L5P-204ENST00000443759 179 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 AC009474.2-201ENST00000451383 136 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.1□□□□□ -2.23
RAB40BQ12829 AC004223.1-201ENST00000479840 271 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.1□□□□□ -2.23
RAB40BQ12829 AC097462.1-201ENST00000514125 324 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 RN7SKP88-201ENST00000516847 250 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 RNU1-92P-201ENST00000517017 135 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 RNU7-172P-201ENST00000517125 64 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 AC022868.1-201ENST00000517767 391 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.1□□□□□ -2.23
RAB40BQ12829 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.1□□□□□ -2.23
RAB40BQ12829 7SK.8-201ENST00000612110 250 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 AL357075.2-201ENST00000614906 189 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 7SK.11-201ENST00000615477 250 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 AC073349.3-201ENST00000617616 186 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 MIR8065-201ENST00000620577 100 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 AL513423.1-201ENST00000621695 132 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 7SK.13-201ENST00000622040 250 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 SNORD3E-202ENST00000627253 216 ntBASIC1.1□□□□□ -2.23
RAB40BQ12829 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
RAB40BQ12829 RNU1-22P-201ENST00000363334 158 ntBASIC1.09□□□□□ -2.23
RAB40BQ12829 RNU6-407P-201ENST00000365280 104 ntBASIC1.09□□□□□ -2.23
RAB40BQ12829 Y_RNA.358-201ENST00000365491 99 ntBASIC1.09□□□□□ -2.23
RAB40BQ12829 RNU6-1145P-201ENST00000384246 107 ntBASIC1.09□□□□□ -2.23
RAB40BQ12829 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
RAB40BQ12829 SNORA12.1-201ENST00000390873 148 ntBASIC1.09□□□□□ -2.23
RAB40BQ12829 SNORA40.6-201ENST00000391153 128 ntBASIC1.09□□□□□ -2.23
RAB40BQ12829 RNU11-5P-201ENST00000391216 129 ntBASIC1.09□□□□□ -2.23
RAB40BQ12829 RNU6-192P-201ENST00000391253 100 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms