Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 Y_RNA.135-201ENST00000363439 95 ntBASIC0.96□□□□□ -2.26
CCNA1P78396 SNORD115-32-201ENST00000364079 82 ntBASIC0.96□□□□□ -2.26
CCNA1P78396 Y_RNA.212-201ENST00000364177 102 ntBASIC0.96□□□□□ -2.26
CCNA1P78396 Y_RNA.415-201ENST00000384012 112 ntBASIC0.96□□□□□ -2.26
CCNA1P78396 RNU6-332P-201ENST00000391193 108 ntBASIC0.96□□□□□ -2.26
CCNA1P78396 AC008134.1-201ENST00000420943 193 ntBASIC0.96□□□□□ -2.26
CCNA1P78396 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.96□□□□□ -2.26
CCNA1P78396 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
CCNA1P78396 ACA59.1-201ENST00000515966 143 ntBASIC0.96□□□□□ -2.26
CCNA1P78396 SCARNA16.2-201ENST00000516520 172 ntBASIC0.96□□□□□ -2.26
CCNA1P78396 RNU6-273P-201ENST00000516937 96 ntBASIC0.96□□□□□ -2.26
CCNA1P78396 RNU6-58P-201ENST00000517143 103 ntBASIC0.96□□□□□ -2.26
CCNA1P78396 SUMO2P16-201ENST00000519475 264 ntBASIC0.96□□□□□ -2.26
CCNA1P78396 AC024909.2-201ENST00000553035 286 ntBASIC0.96□□□□□ -2.26
CCNA1P78396 UBL5P4-201ENST00000562584 236 ntBASIC0.96□□□□□ -2.26
CCNA1P78396 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.96□□□□□ -2.26
CCNA1P78396 TPRKBP2-201ENST00000565969 475 ntBASIC0.96□□□□□ -2.26
CCNA1P78396 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.96□□□□□ -2.26
CCNA1P78396 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.96□□□□□ -2.26
CCNA1P78396 AC048344.4-201ENST00000619744 527 ntBASIC0.96□□□□□ -2.26
CCNA1P78396 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.96□□□□□ -2.26
CCNA1P78396 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
CCNA1P78396 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
CCNA1P78396 SNORD115-8-201ENST00000363856 82 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 Y_RNA.194-201ENST00000363985 102 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 SNORD115-38-201ENST00000365037 82 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 RNU6-1240P-201ENST00000365155 104 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 Y_RNA.414-201ENST00000384011 101 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 RNU6-245P-201ENST00000384020 107 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 Y_RNA.517-201ENST00000384551 106 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 RNU6-1031P-201ENST00000384773 107 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 MIR216A-201ENST00000385063 110 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 MIR153-2-201ENST00000385225 87 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 SNORD12-201ENST00000391002 90 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CCNA1P78396 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.95□□□□□ -2.26
CCNA1P78396 MTCO2P7-201ENST00000446518 666 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.95□□□□□ -2.26
CCNA1P78396 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.95□□□□□ -2.26
CCNA1P78396 RNU6-506P-201ENST00000516553 94 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 RNU1-142P-201ENST00000516682 145 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 AK6P2-201ENST00000549020 471 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 MIR4714-201ENST00000580728 77 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 MIR3672-201ENST00000584290 82 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 AL513534.2-201ENST00000603836 250 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 AC021506.2-201ENST00000612354 169 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 AL359075.3-201ENST00000613288 217 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 AC090617.10-201ENST00000624308 134 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 U6.108-201ENST00000637764 58 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 MIR1321-201ENST00000637766 79 ntBASIC0.95□□□□□ -2.26
CCNA1P78396 Y_RNA.100-201ENST00000363141 102 ntBASIC0.94□□□□□ -2.26
CCNA1P78396 RNU6-541P-201ENST00000384709 110 ntBASIC0.94□□□□□ -2.26
CCNA1P78396 RNU6-1186P-201ENST00000410429 97 ntBASIC0.94□□□□□ -2.26
CCNA1P78396 RNU2-64P-201ENST00000411315 191 ntBASIC0.94□□□□□ -2.26
CCNA1P78396 RAB28P5-201ENST00000427490 651 ntBASIC0.94□□□□□ -2.26
CCNA1P78396 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.94□□□□□ -2.26
CCNA1P78396 MTATP6P13-201ENST00000438531 667 ntBASIC0.94□□□□□ -2.26
CCNA1P78396 AC091179.3-201ENST00000474761 144 ntBASIC0.94□□□□□ -2.26
CCNA1P78396 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.94□□□□□ -2.26
CCNA1P78396 SNORA31.10-201ENST00000516482 106 ntBASIC0.94□□□□□ -2.26
CCNA1P78396 MIR3942-201ENST00000585264 109 ntBASIC0.94□□□□□ -2.26
CCNA1P78396 AC022217.4-201ENST00000604389 163 ntBASIC0.94□□□□□ -2.26
CCNA1P78396 AC124303.1-201ENST00000605703 360 ntBASIC0.94□□□□□ -2.26
CCNA1P78396 AC019193.3-201ENST00000609144 554 ntBASIC0.94□□□□□ -2.26
CCNA1P78396 AL442644.1-201ENST00000454390 3105 ntBASIC0.94□□□□□ -2.26
CCNA1P78396 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CCNA1P78396 SNORD114-24-201ENST00000365029 72 ntBASIC0.93□□□□□ -2.26
CCNA1P78396 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.93□□□□□ -2.26
CCNA1P78396 ZNF885P-201ENST00000420174 1098 ntBASIC0.93□□□□□ -2.26
CCNA1P78396 AC245047.3-201ENST00000429428 127 ntBASIC0.93□□□□□ -2.26
CCNA1P78396 DLGAP5P1-201ENST00000430307 464 ntBASIC0.93□□□□□ -2.26
CCNA1P78396 Z83846.1-201ENST00000446798 265 ntBASIC0.93□□□□□ -2.26
CCNA1P78396 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.93□□□□□ -2.26
CCNA1P78396 RNU6-165P-201ENST00000517170 99 ntBASIC0.93□□□□□ -2.26
CCNA1P78396 RNU7-128P-201ENST00000517247 62 ntBASIC0.93□□□□□ -2.26
CCNA1P78396 AC109635.3-201ENST00000529536 185 ntBASIC0.93□□□□□ -2.26
CCNA1P78396 FRG2DP-202ENST00000566967 323 ntBASIC0.93□□□□□ -2.26
CCNA1P78396 AC133485.1-201ENST00000567176 124 ntBASIC0.93□□□□□ -2.26
CCNA1P78396 AC138907.6-201ENST00000568401 126 ntBASIC0.93□□□□□ -2.26
CCNA1P78396 AC005730.3-201ENST00000583067 366 ntBASIC0.93□□□□□ -2.26
CCNA1P78396 AC009248.2-201ENST00000619826 254 ntBASIC0.93□□□□□ -2.26
CCNA1P78396 AC024614.3-201ENST00000637860 256 ntBASIC0.93□□□□□ -2.26
CCNA1P78396 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
CCNA1P78396 RNU4-79P-201ENST00000362764 141 ntBASIC0.92□□□□□ -2.26
CCNA1P78396 U3.8-201ENST00000363675 217 ntBASIC0.92□□□□□ -2.26
CCNA1P78396 Y_RNA.205-201ENST00000364128 113 ntBASIC0.92□□□□□ -2.26
CCNA1P78396 RNU4-24P-201ENST00000364565 139 ntBASIC0.92□□□□□ -2.26
CCNA1P78396 Y_RNA.533-201ENST00000384596 114 ntBASIC0.92□□□□□ -2.26
CCNA1P78396 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.92□□□□□ -2.26
CCNA1P78396 AP000870.1-201ENST00000472927 406 ntBASIC0.92□□□□□ -2.26
CCNA1P78396 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.92□□□□□ -2.26
CCNA1P78396 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.92□□□□□ -2.26
CCNA1P78396 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.92□□□□□ -2.26
CCNA1P78396 RNU6-1266P-201ENST00000362794 105 ntBASIC0.91□□□□□ -2.26
CCNA1P78396 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.91□□□□□ -2.26
CCNA1P78396 SNORD116-11-201ENST00000383882 92 ntBASIC0.91□□□□□ -2.26
CCNA1P78396 RNY1P4-201ENST00000384595 115 ntBASIC0.91□□□□□ -2.26
CCNA1P78396 MIR200A-201ENST00000384875 90 ntBASIC0.91□□□□□ -2.26
CCNA1P78396 MIR1185-2-201ENST00000408687 86 ntBASIC0.91□□□□□ -2.26
CCNA1P78396 AC243428.1-201ENST00000421099 264 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms