Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC023157.2-201ENST00000540596 141 ntBASIC0.9□□□□□ -2.27
VSX2P58304 AC124303.1-201ENST00000605703 360 ntBASIC0.9□□□□□ -2.27
VSX2P58304 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.9□□□□□ -2.27
VSX2P58304 AC099654.5-201ENST00000636479 350 ntBASIC0.9□□□□□ -2.27
VSX2P58304 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
VSX2P58304 SNORA25-201ENST00000384384 134 ntBASIC0.89□□□□□ -2.27
VSX2P58304 Y_RNA.554-201ENST00000384672 102 ntBASIC0.89□□□□□ -2.27
VSX2P58304 AC243428.1-201ENST00000421099 264 ntBASIC0.89□□□□□ -2.27
VSX2P58304 MTND2P22-201ENST00000444325 1033 ntBASIC0.89□□□□□ -2.27
VSX2P58304 NDUFB4P10-201ENST00000452541 359 ntBASIC0.89□□□□□ -2.27
VSX2P58304 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
VSX2P58304 RPL39P38-201ENST00000467018 153 ntBASIC0.89□□□□□ -2.27
VSX2P58304 RNU7-40P-201ENST00000516397 64 ntBASIC0.89□□□□□ -2.27
VSX2P58304 RNU6-506P-201ENST00000516553 94 ntBASIC0.89□□□□□ -2.27
VSX2P58304 RNU6-1198P-201ENST00000516904 67 ntBASIC0.89□□□□□ -2.27
VSX2P58304 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.89□□□□□ -2.27
VSX2P58304 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.89□□□□□ -2.27
VSX2P58304 AC245505.1-201ENST00000556398 224 ntBASIC0.89□□□□□ -2.27
VSX2P58304 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.89□□□□□ -2.27
VSX2P58304 MIR4778-201ENST00000577635 80 ntBASIC0.89□□□□□ -2.27
VSX2P58304 AL022345.2-201ENST00000606307 135 ntBASIC0.89□□□□□ -2.27
VSX2P58304 BX284668.6-201ENST00000606899 438 ntBASIC0.89□□□□□ -2.27
VSX2P58304 MIR6788-201ENST00000618842 66 ntBASIC0.89□□□□□ -2.27
VSX2P58304 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.89□□□□□ -2.27
VSX2P58304 AC027335.2-201ENST00000624030 375 ntBASIC0.89□□□□□ -2.27
VSX2P58304 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
VSX2P58304 Y_RNA.179-201ENST00000363844 90 ntBASIC0.88□□□□□ -2.27
VSX2P58304 RNU6-793P-201ENST00000384233 104 ntBASIC0.88□□□□□ -2.27
VSX2P58304 RNU6-505P-201ENST00000384427 107 ntBASIC0.88□□□□□ -2.27
VSX2P58304 RNU6-831P-201ENST00000384548 107 ntBASIC0.88□□□□□ -2.27
VSX2P58304 DAP3P1-201ENST00000441522 278 ntBASIC0.88□□□□□ -2.27
VSX2P58304 RPS4XP11-201ENST00000446897 772 ntBASIC0.88□□□□□ -2.27
VSX2P58304 AC048334.1-201ENST00000477975 159 ntBASIC0.88□□□□□ -2.27
VSX2P58304 RNU6-922P-201ENST00000516753 99 ntBASIC0.88□□□□□ -2.27
VSX2P58304 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.88□□□□□ -2.27
VSX2P58304 CYCSP23-201ENST00000519781 313 ntBASIC0.88□□□□□ -2.27
VSX2P58304 AC004584.2-201ENST00000570407 410 ntBASIC0.88□□□□□ -2.27
VSX2P58304 MIR151B-201ENST00000584249 96 ntBASIC0.88□□□□□ -2.27
VSX2P58304 MIR6857-201ENST00000613267 93 ntBASIC0.88□□□□□ -2.27
VSX2P58304 SNORD3E-202ENST00000627253 216 ntBASIC0.88□□□□□ -2.27
VSX2P58304 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.87□□□□□ -2.27
VSX2P58304 AL391516.1-201ENST00000554380 2449 ntBASIC0.87□□□□□ -2.27
VSX2P58304 RNU6-222P-201ENST00000362438 107 ntBASIC0.87□□□□□ -2.27
VSX2P58304 RNU6-281P-201ENST00000384212 103 ntBASIC0.87□□□□□ -2.27
VSX2P58304 MIR532-201ENST00000385025 91 ntBASIC0.87□□□□□ -2.27
VSX2P58304 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.87□□□□□ -2.27
VSX2P58304 MIR548J-201ENST00000408833 112 ntBASIC0.87□□□□□ -2.27
VSX2P58304 AC016907.1-201ENST00000419483 435 ntBASIC0.87□□□□□ -2.27
VSX2P58304 USP9YP30-201ENST00000430729 455 ntBASIC0.87□□□□□ -2.27
VSX2P58304 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.87□□□□□ -2.27
VSX2P58304 AC010469.2-201ENST00000496412 480 ntBASIC0.87□□□□□ -2.27
VSX2P58304 SNORD116-28-201ENST00000516123 91 ntBASIC0.87□□□□□ -2.27
VSX2P58304 RN7SKP49-201ENST00000516675 260 ntBASIC0.87□□□□□ -2.27
VSX2P58304 RNU6-1223P-201ENST00000517124 104 ntBASIC0.87□□□□□ -2.27
VSX2P58304 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.87□□□□□ -2.27
VSX2P58304 MIR4438-201ENST00000585271 93 ntBASIC0.87□□□□□ -2.27
VSX2P58304 AC211469.2-201ENST00000605461 205 ntBASIC0.87□□□□□ -2.27
VSX2P58304 AC022709.1-201ENST00000615967 87 ntBASIC0.87□□□□□ -2.27
VSX2P58304 MIR373-201ENST00000362273 69 ntBASIC0.86□□□□□ -2.27
VSX2P58304 Y_RNA.363-201ENST00000365529 113 ntBASIC0.86□□□□□ -2.27
VSX2P58304 RNU6-842P-201ENST00000384269 107 ntBASIC0.86□□□□□ -2.27
VSX2P58304 RNU6-950P-201ENST00000384651 107 ntBASIC0.86□□□□□ -2.27
VSX2P58304 AL355796.1-201ENST00000406706 323 ntBASIC0.86□□□□□ -2.27
VSX2P58304 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.86□□□□□ -2.27
VSX2P58304 AC093850.1-201ENST00000454121 251 ntBASIC0.86□□□□□ -2.27
VSX2P58304 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.86□□□□□ -2.27
VSX2P58304 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.86□□□□□ -2.27
VSX2P58304 AC093303.1-201ENST00000514549 295 ntBASIC0.86□□□□□ -2.27
VSX2P58304 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.86□□□□□ -2.27
VSX2P58304 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.86□□□□□ -2.27
VSX2P58304 AC024909.2-201ENST00000553035 286 ntBASIC0.86□□□□□ -2.27
VSX2P58304 MIR4698-201ENST00000577795 80 ntBASIC0.86□□□□□ -2.27
VSX2P58304 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.86□□□□□ -2.27
VSX2P58304 MIR3973-201ENST00000579824 107 ntBASIC0.86□□□□□ -2.27
VSX2P58304 MIR4273-201ENST00000582824 84 ntBASIC0.86□□□□□ -2.27
VSX2P58304 AC022432.1-201ENST00000595739 310 ntBASIC0.86□□□□□ -2.27
VSX2P58304 AC080078.2-201ENST00000603766 501 ntBASIC0.86□□□□□ -2.27
VSX2P58304 AC010999.1-201ENST00000611856 324 ntBASIC0.86□□□□□ -2.27
VSX2P58304 AC012676.2-201ENST00000619258 186 ntBASIC0.86□□□□□ -2.27
VSX2P58304 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
VSX2P58304 RNU6-595P-201ENST00000363944 107 ntBASIC0.85□□□□□ -2.27
VSX2P58304 RNU6-280P-201ENST00000364145 104 ntBASIC0.85□□□□□ -2.27
VSX2P58304 Y_RNA.473-201ENST00000384333 102 ntBASIC0.85□□□□□ -2.27
VSX2P58304 SNORD41-201ENST00000386967 70 ntBASIC0.85□□□□□ -2.27
VSX2P58304 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.85□□□□□ -2.27
VSX2P58304 RAB28P5-201ENST00000427490 651 ntBASIC0.85□□□□□ -2.27
VSX2P58304 CALM2P4-201ENST00000430810 426 ntBASIC0.85□□□□□ -2.27
VSX2P58304 MTND3P23-201ENST00000431980 347 ntBASIC0.85□□□□□ -2.27
VSX2P58304 STAG3L5P-204ENST00000443759 179 ntBASIC0.85□□□□□ -2.27
VSX2P58304 RPS27P22-201ENST00000478056 241 ntBASIC0.85□□□□□ -2.27
VSX2P58304 AC093534.1-201ENST00000504977 132 ntBASIC0.85□□□□□ -2.27
VSX2P58304 UBL5P1-201ENST00000507979 193 ntBASIC0.85□□□□□ -2.27
VSX2P58304 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.85□□□□□ -2.27
VSX2P58304 RNU7-175P-201ENST00000515915 61 ntBASIC0.85□□□□□ -2.27
VSX2P58304 RNA5SP168-201ENST00000516642 112 ntBASIC0.85□□□□□ -2.27
VSX2P58304 RNU6-107P-201ENST00000516643 102 ntBASIC0.85□□□□□ -2.27
VSX2P58304 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.85□□□□□ -2.27
VSX2P58304 AC073349.3-201ENST00000617616 186 ntBASIC0.85□□□□□ -2.27
VSX2P58304 AC048344.4-201ENST00000619744 527 ntBASIC0.85□□□□□ -2.27
VSX2P58304 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms