Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RNU6-970P-201ENST00000516312 107 ntBASIC1.57□□□□□ -2.16
PEX3P56589 MIR2355-201ENST00000517199 87 ntBASIC1.57□□□□□ -2.16
PEX3P56589 AP002001.1-203ENST00000534002 267 ntBASIC1.57□□□□□ -2.16
PEX3P56589 AC103810.8-201ENST00000607347 118 ntBASIC1.57□□□□□ -2.16
PEX3P56589 AL008636.1-201ENST00000625038 1018 ntBASIC1.57□□□□□ -2.16
PEX3P56589 ZNF209P-201ENST00000593450 2304 ntBASIC1.56□□□□□ -2.16
PEX3P56589 MIR378A-201ENST00000362177 66 ntBASIC1.56□□□□□ -2.16
PEX3P56589 U8.1-201ENST00000362843 134 ntBASIC1.56□□□□□ -2.16
PEX3P56589 SNORA33-201ENST00000363664 130 ntBASIC1.56□□□□□ -2.16
PEX3P56589 MIR625-201ENST00000385047 85 ntBASIC1.56□□□□□ -2.16
PEX3P56589 RNA5SP212-201ENST00000391223 107 ntBASIC1.56□□□□□ -2.16
PEX3P56589 MTCO2P27-201ENST00000420740 428 ntBASIC1.56□□□□□ -2.16
PEX3P56589 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.56□□□□□ -2.16
PEX3P56589 CST2P1-201ENST00000425770 87 ntBASIC1.56□□□□□ -2.16
PEX3P56589 AC092473.1-201ENST00000441098 221 ntBASIC1.56□□□□□ -2.16
PEX3P56589 UBE2V1P7-201ENST00000446395 340 ntBASIC1.56□□□□□ -2.16
PEX3P56589 MIR2053-201ENST00000459295 91 ntBASIC1.56□□□□□ -2.16
PEX3P56589 RNU6-699P-201ENST00000517081 110 ntBASIC1.56□□□□□ -2.16
PEX3P56589 AL161670.1-201ENST00000554348 137 ntBASIC1.56□□□□□ -2.16
PEX3P56589 MIR4713-201ENST00000582691 75 ntBASIC1.56□□□□□ -2.16
PEX3P56589 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.56□□□□□ -2.16
PEX3P56589 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.56□□□□□ -2.16
PEX3P56589 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.55□□□□□ -2.16
PEX3P56589 SNORA63D-201ENST00000364359 132 ntBASIC1.55□□□□□ -2.16
PEX3P56589 RNU6-867P-201ENST00000364956 107 ntBASIC1.55□□□□□ -2.16
PEX3P56589 SNORA69.1-201ENST00000390904 137 ntBASIC1.55□□□□□ -2.16
PEX3P56589 AP1B1P2-201ENST00000416196 106 ntBASIC1.55□□□□□ -2.16
PEX3P56589 MTND4P28-201ENST00000426217 387 ntBASIC1.55□□□□□ -2.16
PEX3P56589 TOMM22P2-201ENST00000430735 237 ntBASIC1.55□□□□□ -2.16
PEX3P56589 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.55□□□□□ -2.16
PEX3P56589 RPL26P26-201ENST00000480251 434 ntBASIC1.55□□□□□ -2.16
PEX3P56589 AC074133.1-201ENST00000515696 183 ntBASIC1.55□□□□□ -2.16
PEX3P56589 RNU7-4P-201ENST00000516961 62 ntBASIC1.55□□□□□ -2.16
PEX3P56589 RNU1-92P-201ENST00000517017 135 ntBASIC1.55□□□□□ -2.16
PEX3P56589 RNU6-264P-201ENST00000517134 104 ntBASIC1.55□□□□□ -2.16
PEX3P56589 AC022868.1-201ENST00000517767 391 ntBASIC1.55□□□□□ -2.16
PEX3P56589 CYCSP23-201ENST00000519781 313 ntBASIC1.55□□□□□ -2.16
PEX3P56589 MIR5094-201ENST00000578766 85 ntBASIC1.55□□□□□ -2.16
PEX3P56589 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.55□□□□□ -2.16
PEX3P56589 AC006001.4-201ENST00000622243 395 ntBASIC1.55□□□□□ -2.16
PEX3P56589 U6.108-201ENST00000637764 58 ntBASIC1.55□□□□□ -2.16
PEX3P56589 Y_RNA.5-201ENST00000362334 102 ntBASIC1.54□□□□□ -2.16
PEX3P56589 RNY3P11-201ENST00000364153 102 ntBASIC1.54□□□□□ -2.16
PEX3P56589 Y_RNA.252-201ENST00000364556 101 ntBASIC1.54□□□□□ -2.16
PEX3P56589 RNU5E-4P-201ENST00000364931 120 ntBASIC1.54□□□□□ -2.16
PEX3P56589 RNU6-1264P-201ENST00000383891 107 ntBASIC1.54□□□□□ -2.16
PEX3P56589 RNY3P4-201ENST00000384428 101 ntBASIC1.54□□□□□ -2.16
PEX3P56589 AC008134.1-201ENST00000420943 193 ntBASIC1.54□□□□□ -2.16
PEX3P56589 AL603825.1-201ENST00000438481 80 ntBASIC1.54□□□□□ -2.16
PEX3P56589 AC099799.1-201ENST00000439809 192 ntBASIC1.54□□□□□ -2.16
PEX3P56589 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.54□□□□□ -2.16
PEX3P56589 RNU6-911P-201ENST00000516523 104 ntBASIC1.54□□□□□ -2.16
PEX3P56589 SNORA31.17-201ENST00000516953 127 ntBASIC1.54□□□□□ -2.16
PEX3P56589 RNU7-128P-201ENST00000517247 62 ntBASIC1.54□□□□□ -2.16
PEX3P56589 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
PEX3P56589 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.54□□□□□ -2.16
PEX3P56589 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.54□□□□□ -2.16
PEX3P56589 AL442163.3-201ENST00000554110 156 ntBASIC1.54□□□□□ -2.16
PEX3P56589 MIR4285-201ENST00000581001 85 ntBASIC1.54□□□□□ -2.16
PEX3P56589 AC069114.2-201ENST00000604699 304 ntBASIC1.54□□□□□ -2.16
PEX3P56589 AL133255.1-201ENST00000606374 441 ntBASIC1.54□□□□□ -2.16
PEX3P56589 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.54□□□□□ -2.16
PEX3P56589 RNU1-96P-201ENST00000364163 162 ntBASIC1.53□□□□□ -2.16
PEX3P56589 RNU6-879P-201ENST00000364328 108 ntBASIC1.53□□□□□ -2.16
PEX3P56589 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.53□□□□□ -2.16
PEX3P56589 Y_RNA.595-201ENST00000410403 105 ntBASIC1.53□□□□□ -2.16
PEX3P56589 AC018865.2-201ENST00000423631 129 ntBASIC1.53□□□□□ -2.16
PEX3P56589 AC236972.2-201ENST00000434979 310 ntBASIC1.53□□□□□ -2.16
PEX3P56589 HSPE1P24-201ENST00000450782 238 ntBASIC1.53□□□□□ -2.16
PEX3P56589 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.53□□□□□ -2.16
PEX3P56589 SNORA40.9-201ENST00000515895 93 ntBASIC1.53□□□□□ -2.16
PEX3P56589 RNA5SP437-201ENST00000517249 129 ntBASIC1.53□□□□□ -2.16
PEX3P56589 AC018448.1-201ENST00000552843 316 ntBASIC1.53□□□□□ -2.16
PEX3P56589 AC104985.2-201ENST00000620598 500 ntBASIC1.53□□□□□ -2.16
PEX3P56589 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.53□□□□□ -2.16
PEX3P56589 MIR4272-201ENST00000635924 64 ntBASIC1.53□□□□□ -2.16
PEX3P56589 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
PEX3P56589 Y_RNA.146-201ENST00000363549 102 ntBASIC1.52□□□□□ -2.17
PEX3P56589 RNU6-1019P-201ENST00000364424 107 ntBASIC1.52□□□□□ -2.17
PEX3P56589 RNU6-1240P-201ENST00000365155 104 ntBASIC1.52□□□□□ -2.17
PEX3P56589 SNORD42.2-201ENST00000365570 69 ntBASIC1.52□□□□□ -2.17
PEX3P56589 Y_RNA.395-201ENST00000383945 109 ntBASIC1.52□□□□□ -2.17
PEX3P56589 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
PEX3P56589 Y_RNA.579-201ENST00000390939 94 ntBASIC1.52□□□□□ -2.17
PEX3P56589 Y_RNA.604-201ENST00000410574 102 ntBASIC1.52□□□□□ -2.17
PEX3P56589 AC114482.1-201ENST00000418010 247 ntBASIC1.52□□□□□ -2.17
PEX3P56589 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.52□□□□□ -2.17
PEX3P56589 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.52□□□□□ -2.17
PEX3P56589 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.52□□□□□ -2.17
PEX3P56589 UQCRBP2-201ENST00000447827 297 ntBASIC1.52□□□□□ -2.17
PEX3P56589 PCNPP5-201ENST00000452246 481 ntBASIC1.52□□□□□ -2.17
PEX3P56589 RPS26P45-201ENST00000471748 340 ntBASIC1.52□□□□□ -2.17
PEX3P56589 RNA5SP61-201ENST00000516453 100 ntBASIC1.52□□□□□ -2.17
PEX3P56589 AC084364.2-201ENST00000546924 395 ntBASIC1.52□□□□□ -2.17
PEX3P56589 MIR4421-201ENST00000578133 69 ntBASIC1.52□□□□□ -2.17
PEX3P56589 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.52□□□□□ -2.17
PEX3P56589 AC005828.6-201ENST00000606610 232 ntBASIC1.52□□□□□ -2.17
PEX3P56589 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
PEX3P56589 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.51□□□□□ -2.17
PEX3P56589 RNU6-454P-201ENST00000364292 107 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms