Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 SNORA69.1-201ENST00000390904 137 ntBASIC1.68□□□□□ -2.14
LIG4P49917 SNORA67.6-201ENST00000391093 99 ntBASIC1.68□□□□□ -2.14
LIG4P49917 MTCYBP4-201ENST00000401524 249 ntBASIC1.68□□□□□ -2.14
LIG4P49917 MIR1323-201ENST00000408090 73 ntBASIC1.68□□□□□ -2.14
LIG4P49917 COX6CP10-201ENST00000416832 224 ntBASIC1.68□□□□□ -2.14
LIG4P49917 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.68□□□□□ -2.14
LIG4P49917 SNORA40.9-201ENST00000515895 93 ntBASIC1.68□□□□□ -2.14
LIG4P49917 MIR2355-201ENST00000517199 87 ntBASIC1.68□□□□□ -2.14
LIG4P49917 RNU7-128P-201ENST00000517247 62 ntBASIC1.68□□□□□ -2.14
LIG4P49917 AC027419.1-201ENST00000522976 328 ntBASIC1.68□□□□□ -2.14
LIG4P49917 AC018448.1-201ENST00000552843 316 ntBASIC1.68□□□□□ -2.14
LIG4P49917 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.68□□□□□ -2.14
LIG4P49917 AC087588.2-201ENST00000617667 426 ntBASIC1.68□□□□□ -2.14
LIG4P49917 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.68□□□□□ -2.14
LIG4P49917 AC073544.1-201ENST00000600110 1595 ntBASIC1.68□□□□□ -2.14
LIG4P49917 RNU6-1301P-201ENST00000362724 104 ntBASIC1.67□□□□□ -2.14
LIG4P49917 Y_RNA.259-201ENST00000364619 101 ntBASIC1.67□□□□□ -2.14
LIG4P49917 Y_RNA.384-201ENST00000383909 102 ntBASIC1.67□□□□□ -2.14
LIG4P49917 Y_RNA.498-201ENST00000384460 102 ntBASIC1.67□□□□□ -2.14
LIG4P49917 SNORA17.3-201ENST00000391159 129 ntBASIC1.67□□□□□ -2.14
LIG4P49917 RPS20P15-201ENST00000412792 311 ntBASIC1.67□□□□□ -2.14
LIG4P49917 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.67□□□□□ -2.14
LIG4P49917 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.67□□□□□ -2.14
LIG4P49917 AL606517.2-201ENST00000442855 241 ntBASIC1.67□□□□□ -2.14
LIG4P49917 RNU6-625P-201ENST00000459412 107 ntBASIC1.67□□□□□ -2.14
LIG4P49917 RPS26P45-201ENST00000471748 340 ntBASIC1.67□□□□□ -2.14
LIG4P49917 AC027575.1-201ENST00000481064 460 ntBASIC1.67□□□□□ -2.14
LIG4P49917 AC105758.1-201ENST00000506038 399 ntBASIC1.67□□□□□ -2.14
LIG4P49917 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.67□□□□□ -2.14
LIG4P49917 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.67□□□□□ -2.14
LIG4P49917 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.67□□□□□ -2.14
LIG4P49917 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.67□□□□□ -2.14
LIG4P49917 HSBP1P1-201ENST00000555205 166 ntBASIC1.67□□□□□ -2.14
LIG4P49917 MIR4709-201ENST00000577272 72 ntBASIC1.67□□□□□ -2.14
LIG4P49917 MIR4285-201ENST00000581001 85 ntBASIC1.67□□□□□ -2.14
LIG4P49917 MIR4303-201ENST00000581299 66 ntBASIC1.67□□□□□ -2.14
LIG4P49917 MIR548S-201ENST00000581352 82 ntBASIC1.67□□□□□ -2.14
LIG4P49917 MIR4438-201ENST00000585271 93 ntBASIC1.67□□□□□ -2.14
LIG4P49917 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.67□□□□□ -2.14
LIG4P49917 AC006435.5-201ENST00000624486 112 ntBASIC1.67□□□□□ -2.14
LIG4P49917 AC095038.3-201ENST00000634439 195 ntBASIC1.67□□□□□ -2.14
LIG4P49917 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LIG4P49917 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LIG4P49917 MIR126-201ENST00000362291 85 ntBASIC1.66□□□□□ -2.14
LIG4P49917 RNU1-42P-201ENST00000364033 160 ntBASIC1.66□□□□□ -2.14
LIG4P49917 RNU6-60P-201ENST00000364792 103 ntBASIC1.66□□□□□ -2.14
LIG4P49917 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.66□□□□□ -2.14
LIG4P49917 SNORD116-29-201ENST00000384516 83 ntBASIC1.66□□□□□ -2.14
LIG4P49917 RNY4P36-201ENST00000391116 96 ntBASIC1.66□□□□□ -2.14
LIG4P49917 RPL21P1-201ENST00000399532 476 ntBASIC1.66□□□□□ -2.14
LIG4P49917 MIR1304-201ENST00000408243 91 ntBASIC1.66□□□□□ -2.14
LIG4P49917 Y_RNA.592-201ENST00000410274 109 ntBASIC1.66□□□□□ -2.14
LIG4P49917 SNORD12B-201ENST00000410433 91 ntBASIC1.66□□□□□ -2.14
LIG4P49917 MTND4P28-201ENST00000426217 387 ntBASIC1.66□□□□□ -2.14
LIG4P49917 RPS27P1-201ENST00000450552 247 ntBASIC1.66□□□□□ -2.14
LIG4P49917 HSPE1P24-201ENST00000450782 238 ntBASIC1.66□□□□□ -2.14
LIG4P49917 ELOCP24-201ENST00000456370 334 ntBASIC1.66□□□□□ -2.14
LIG4P49917 RNU7-34P-201ENST00000459394 64 ntBASIC1.66□□□□□ -2.14
LIG4P49917 RPS27P22-201ENST00000478056 241 ntBASIC1.66□□□□□ -2.14
LIG4P49917 AC010469.2-201ENST00000496412 480 ntBASIC1.66□□□□□ -2.14
LIG4P49917 AC010598.1-201ENST00000510378 103 ntBASIC1.66□□□□□ -2.14
LIG4P49917 RNU6-875P-201ENST00000516488 106 ntBASIC1.66□□□□□ -2.14
LIG4P49917 RNU7-4P-201ENST00000516961 62 ntBASIC1.66□□□□□ -2.14
LIG4P49917 AC023157.2-201ENST00000540596 141 ntBASIC1.66□□□□□ -2.14
LIG4P49917 AC015720.1-201ENST00000565251 277 ntBASIC1.66□□□□□ -2.14
LIG4P49917 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.66□□□□□ -2.14
LIG4P49917 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.66□□□□□ -2.14
LIG4P49917 AL645939.4-201ENST00000604495 135 ntBASIC1.66□□□□□ -2.14
LIG4P49917 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
LIG4P49917 RNU6-203P-201ENST00000384038 104 ntBASIC1.65□□□□□ -2.15
LIG4P49917 MRPS10P1-201ENST00000448483 130 ntBASIC1.65□□□□□ -2.15
LIG4P49917 AC023790.1-201ENST00000482174 347 ntBASIC1.65□□□□□ -2.15
LIG4P49917 RNU7-99P-201ENST00000516271 62 ntBASIC1.65□□□□□ -2.15
LIG4P49917 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.65□□□□□ -2.15
LIG4P49917 AL355375.2-201ENST00000574825 175 ntBASIC1.65□□□□□ -2.15
LIG4P49917 AC022217.4-201ENST00000604389 163 ntBASIC1.65□□□□□ -2.15
LIG4P49917 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LIG4P49917 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
LIG4P49917 ICE2P2-201ENST00000483823 2787 ntBASIC1.64□□□□□ -2.15
LIG4P49917 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LIG4P49917 MIR410-201ENST00000362222 80 ntBASIC1.64□□□□□ -2.15
LIG4P49917 SNORA20B-201ENST00000384220 132 ntBASIC1.64□□□□□ -2.15
LIG4P49917 AL355796.1-201ENST00000406706 323 ntBASIC1.64□□□□□ -2.15
LIG4P49917 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.64□□□□□ -2.15
LIG4P49917 RAB28P5-201ENST00000427490 651 ntBASIC1.64□□□□□ -2.15
LIG4P49917 AC093019.1-201ENST00000443135 252 ntBASIC1.64□□□□□ -2.15
LIG4P49917 Y_RNA.718-201ENST00000517110 102 ntBASIC1.64□□□□□ -2.15
LIG4P49917 SNORA31.24-201ENST00000517232 57 ntBASIC1.64□□□□□ -2.15
LIG4P49917 AC144568.1-201ENST00000520139 137 ntBASIC1.64□□□□□ -2.15
LIG4P49917 AP002001.1-203ENST00000534002 267 ntBASIC1.64□□□□□ -2.15
LIG4P49917 AL929325.1-201ENST00000603096 117 ntBASIC1.64□□□□□ -2.15
LIG4P49917 MIR8063-201ENST00000621930 81 ntBASIC1.64□□□□□ -2.15
LIG4P49917 MIR3674-201ENST00000636576 68 ntBASIC1.64□□□□□ -2.15
LIG4P49917 AP000648.3-201ENST00000623539 4507 ntBASIC1.64□□□□□ -2.15
LIG4P49917 Y_RNA.140-201ENST00000363474 103 ntBASIC1.63□□□□□ -2.15
LIG4P49917 RNU6-271P-201ENST00000363858 105 ntBASIC1.63□□□□□ -2.15
LIG4P49917 RNU4-42P-201ENST00000364738 142 ntBASIC1.63□□□□□ -2.15
LIG4P49917 RNU6-1009P-201ENST00000390996 107 ntBASIC1.63□□□□□ -2.15
LIG4P49917 AL161935.2-201ENST00000414627 60 ntBASIC1.63□□□□□ -2.15
LIG4P49917 MRPS18CP6-201ENST00000423587 223 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms