Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.97□□□□□ -2.09
CLK1P49759 EIF4A1P12-201ENST00000551910 141 ntBASIC1.97□□□□□ -2.09
CLK1P49759 MIR1273D-201ENST00000577266 86 ntBASIC1.97□□□□□ -2.09
CLK1P49759 Y_RNA.772-201ENST00000606692 102 ntBASIC1.97□□□□□ -2.09
CLK1P49759 AP001282.2-201ENST00000616149 309 ntBASIC1.97□□□□□ -2.09
CLK1P49759 MIR376A1-201ENST00000616574 68 ntBASIC1.97□□□□□ -2.09
CLK1P49759 LINC02555-201ENST00000563933 1951 ntBASIC1.97□□□□□ -2.09
CLK1P49759 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CLK1P49759 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
CLK1P49759 RNU6-961P-201ENST00000363893 105 ntBASIC1.96□□□□□ -2.1
CLK1P49759 RNU6-280P-201ENST00000364145 104 ntBASIC1.96□□□□□ -2.1
CLK1P49759 RNA5SP160-201ENST00000364866 120 ntBASIC1.96□□□□□ -2.1
CLK1P49759 RNU6-245P-201ENST00000384020 107 ntBASIC1.96□□□□□ -2.1
CLK1P49759 SNORD63-201ENST00000384262 68 ntBASIC1.96□□□□□ -2.1
CLK1P49759 RNU6-937P-201ENST00000384325 106 ntBASIC1.96□□□□□ -2.1
CLK1P49759 RNU6-102P-201ENST00000384485 104 ntBASIC1.96□□□□□ -2.1
CLK1P49759 Y_RNA.562-201ENST00000384695 113 ntBASIC1.96□□□□□ -2.1
CLK1P49759 SNORA12-201ENST00000391162 147 ntBASIC1.96□□□□□ -2.1
CLK1P49759 RNA5SP425-201ENST00000410336 112 ntBASIC1.96□□□□□ -2.1
CLK1P49759 RNU2-20P-201ENST00000410425 191 ntBASIC1.96□□□□□ -2.1
CLK1P49759 RNU6-1203P-201ENST00000410703 110 ntBASIC1.96□□□□□ -2.1
CLK1P49759 RNU2-38P-201ENST00000410856 79 ntBASIC1.96□□□□□ -2.1
CLK1P49759 RNA5SP508-201ENST00000411327 119 ntBASIC1.96□□□□□ -2.1
CLK1P49759 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.96□□□□□ -2.1
CLK1P49759 AC010095.1-201ENST00000443543 144 ntBASIC1.96□□□□□ -2.1
CLK1P49759 SNORD127-201ENST00000458892 86 ntBASIC1.96□□□□□ -2.1
CLK1P49759 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.96□□□□□ -2.1
CLK1P49759 SNORA40.9-201ENST00000515895 93 ntBASIC1.96□□□□□ -2.1
CLK1P49759 SNORA25.14-201ENST00000516481 132 ntBASIC1.96□□□□□ -2.1
CLK1P49759 Y_RNA.713-201ENST00000517013 96 ntBASIC1.96□□□□□ -2.1
CLK1P49759 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.96□□□□□ -2.1
CLK1P49759 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.96□□□□□ -2.1
CLK1P49759 MIR3935-201ENST00000583472 104 ntBASIC1.96□□□□□ -2.1
CLK1P49759 MZT1P2-201ENST00000604387 248 ntBASIC1.96□□□□□ -2.1
CLK1P49759 AC010999.1-201ENST00000611856 324 ntBASIC1.96□□□□□ -2.1
CLK1P49759 AC064859.1-201ENST00000624741 174 ntBASIC1.96□□□□□ -2.1
CLK1P49759 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CLK1P49759 MTND5P6-201ENST00000422338 1798 ntBASIC1.95□□□□□ -2.1
CLK1P49759 AL356292.1-201ENST00000283110 373 ntBASIC1.95□□□□□ -2.1
CLK1P49759 U3.9-201ENST00000363823 204 ntBASIC1.95□□□□□ -2.1
CLK1P49759 Y_RNA.188-201ENST00000363952 111 ntBASIC1.95□□□□□ -2.1
CLK1P49759 SNORD32B-201ENST00000364460 84 ntBASIC1.95□□□□□ -2.1
CLK1P49759 Y_RNA.288-201ENST00000364854 92 ntBASIC1.95□□□□□ -2.1
CLK1P49759 SNORA48.1-201ENST00000390879 135 ntBASIC1.95□□□□□ -2.1
CLK1P49759 Y_RNA.581-201ENST00000391017 97 ntBASIC1.95□□□□□ -2.1
CLK1P49759 MIR1302-6-201ENST00000408466 90 ntBASIC1.95□□□□□ -2.1
CLK1P49759 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.95□□□□□ -2.1
CLK1P49759 AC139712.2-201ENST00000424302 339 ntBASIC1.95□□□□□ -2.1
CLK1P49759 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.95□□□□□ -2.1
CLK1P49759 RNU6-1132P-201ENST00000459214 107 ntBASIC1.95□□□□□ -2.1
CLK1P49759 SNORA59A-201ENST00000459326 152 ntBASIC1.95□□□□□ -2.1
CLK1P49759 RNU6-496P-201ENST00000516145 99 ntBASIC1.95□□□□□ -2.1
CLK1P49759 AK6P2-201ENST00000549020 471 ntBASIC1.95□□□□□ -2.1
CLK1P49759 RRN3P3-201ENST00000549207 578 ntBASIC1.95□□□□□ -2.1
CLK1P49759 AC055872.1-201ENST00000570978 278 ntBASIC1.95□□□□□ -2.1
CLK1P49759 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.95□□□□□ -2.1
CLK1P49759 MIR6873-201ENST00000622788 63 ntBASIC1.95□□□□□ -2.1
CLK1P49759 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
CLK1P49759 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.95□□□□□ -2.1
CLK1P49759 AC010615.1-201ENST00000594254 1764 ntBASIC1.95□□□□□ -2.1
CLK1P49759 MTND5P35-201ENST00000557537 1720 ntBASIC1.94□□□□□ -2.1
CLK1P49759 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CLK1P49759 RNU1-62P-201ENST00000362599 164 ntBASIC1.94□□□□□ -2.1
CLK1P49759 Y_RNA.179-201ENST00000363844 90 ntBASIC1.94□□□□□ -2.1
CLK1P49759 Y_RNA.447-201ENST00000384184 113 ntBASIC1.94□□□□□ -2.1
CLK1P49759 RNU6-793P-201ENST00000384233 104 ntBASIC1.94□□□□□ -2.1
CLK1P49759 Y_RNA.541-201ENST00000384640 113 ntBASIC1.94□□□□□ -2.1
CLK1P49759 SNORA11.4-201ENST00000408823 129 ntBASIC1.94□□□□□ -2.1
CLK1P49759 RNA5SP504-201ENST00000410676 117 ntBASIC1.94□□□□□ -2.1
CLK1P49759 RN7SKP192-201ENST00000411291 327 ntBASIC1.94□□□□□ -2.1
CLK1P49759 ELOCP21-201ENST00000412558 336 ntBASIC1.94□□□□□ -2.1
CLK1P49759 AL445685.2-201ENST00000422551 342 ntBASIC1.94□□□□□ -2.1
CLK1P49759 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.94□□□□□ -2.1
CLK1P49759 TRBVB-201ENST00000477100 408 ntBASIC1.94□□□□□ -2.1
CLK1P49759 Y_RNA.683-201ENST00000516508 93 ntBASIC1.94□□□□□ -2.1
CLK1P49759 RNU6-1271P-201ENST00000517049 105 ntBASIC1.94□□□□□ -2.1
CLK1P49759 AP002001.1-203ENST00000534002 267 ntBASIC1.94□□□□□ -2.1
CLK1P49759 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.94□□□□□ -2.1
CLK1P49759 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.94□□□□□ -2.1
CLK1P49759 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.94□□□□□ -2.1
CLK1P49759 AC127459.3-201ENST00000624328 466 ntBASIC1.94□□□□□ -2.1
CLK1P49759 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.94□□□□□ -2.1
CLK1P49759 Y_RNA.14-201ENST00000362415 103 ntBASIC1.93□□□□□ -2.1
CLK1P49759 Y_RNA.16-201ENST00000362421 102 ntBASIC1.93□□□□□ -2.1
CLK1P49759 Y_RNA.286-201ENST00000364813 102 ntBASIC1.93□□□□□ -2.1
CLK1P49759 RNU6-234P-201ENST00000365229 104 ntBASIC1.93□□□□□ -2.1
CLK1P49759 SNORA18.2-201ENST00000383865 132 ntBASIC1.93□□□□□ -2.1
CLK1P49759 Y_RNA.462-201ENST00000384268 102 ntBASIC1.93□□□□□ -2.1
CLK1P49759 Y_RNA.570-201ENST00000384750 101 ntBASIC1.93□□□□□ -2.1
CLK1P49759 AC027124.2-201ENST00000428249 105 ntBASIC1.93□□□□□ -2.1
CLK1P49759 HSPE1P25-201ENST00000455484 251 ntBASIC1.93□□□□□ -2.1
CLK1P49759 RNU6-991P-201ENST00000516168 107 ntBASIC1.93□□□□□ -2.1
CLK1P49759 AC026470.2-201ENST00000561492 181 ntBASIC1.93□□□□□ -2.1
CLK1P49759 MIR5002-201ENST00000584713 97 ntBASIC1.93□□□□□ -2.1
CLK1P49759 AC012433.1-201ENST00000588916 398 ntBASIC1.93□□□□□ -2.1
CLK1P49759 AC005562.2-201ENST00000618264 111 ntBASIC1.93□□□□□ -2.1
CLK1P49759 MIR219B-201ENST00000637023 88 ntBASIC1.93□□□□□ -2.1
CLK1P49759 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CLK1P49759 MIR126-201ENST00000362291 85 ntBASIC1.92□□□□□ -2.1
CLK1P49759 RNU6-661P-201ENST00000362409 107 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms