Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 RNU6-851P-201ENST00000384565 107 ntBASIC2.97□□□□□ -1.93
SLC6A11P48066 MIR526A2-201ENST00000390198 65 ntBASIC2.97□□□□□ -1.93
SLC6A11P48066 RNU6-131P-201ENST00000391144 107 ntBASIC2.97□□□□□ -1.93
SLC6A11P48066 CKS1BP2-201ENST00000497342 240 ntBASIC2.97□□□□□ -1.93
SLC6A11P48066 SCARNA8-201ENST00000515924 131 ntBASIC2.97□□□□□ -1.93
SLC6A11P48066 AC109810.1-201ENST00000534066 224 ntBASIC2.97□□□□□ -1.93
SLC6A11P48066 MIR4431-201ENST00000579990 94 ntBASIC2.97□□□□□ -1.93
SLC6A11P48066 AC105245.1-201ENST00000581934 244 ntBASIC2.97□□□□□ -1.93
SLC6A11P48066 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.97□□□□□ -1.93
SLC6A11P48066 MIR548AY-201ENST00000617669 107 ntBASIC2.97□□□□□ -1.93
SLC6A11P48066 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SLC6A11P48066 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SLC6A11P48066 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.97□□□□□ -1.93
SLC6A11P48066 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.96□□□□□ -1.93
SLC6A11P48066 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.96□□□□□ -1.94
SLC6A11P48066 SNORA27.1-201ENST00000362604 124 ntBASIC2.96□□□□□ -1.94
SLC6A11P48066 RNU6-743P-201ENST00000364151 106 ntBASIC2.96□□□□□ -1.94
SLC6A11P48066 RNU6-418P-201ENST00000384035 107 ntBASIC2.96□□□□□ -1.94
SLC6A11P48066 MT-TT-201ENST00000387460 66 ntBASIC2.96□□□□□ -1.94
SLC6A11P48066 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SLC6A11P48066 RNU6-383P-201ENST00000410864 94 ntBASIC2.96□□□□□ -1.94
SLC6A11P48066 TRIAP1P1-201ENST00000427062 225 ntBASIC2.96□□□□□ -1.94
SLC6A11P48066 AC087499.2-201ENST00000432861 149 ntBASIC2.96□□□□□ -1.94
SLC6A11P48066 AL162725.1-201ENST00000435405 301 ntBASIC2.96□□□□□ -1.94
SLC6A11P48066 AL121914.1-201ENST00000450188 156 ntBASIC2.96□□□□□ -1.94
SLC6A11P48066 AL137159.1-201ENST00000452808 512 ntBASIC2.96□□□□□ -1.94
SLC6A11P48066 SNORD65B-201ENST00000459126 73 ntBASIC2.96□□□□□ -1.94
SLC6A11P48066 RNU6-221P-201ENST00000459541 99 ntBASIC2.96□□□□□ -1.94
SLC6A11P48066 RPS26P55-201ENST00000471178 356 ntBASIC2.96□□□□□ -1.94
SLC6A11P48066 AC107027.2-201ENST00000512197 115 ntBASIC2.96□□□□□ -1.94
SLC6A11P48066 RNU6-426P-201ENST00000516464 97 ntBASIC2.96□□□□□ -1.94
SLC6A11P48066 SCARNA3-201ENST00000517097 143 ntBASIC2.96□□□□□ -1.94
SLC6A11P48066 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.96□□□□□ -1.94
SLC6A11P48066 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SLC6A11P48066 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SLC6A11P48066 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.95□□□□□ -1.94
SLC6A11P48066 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
SLC6A11P48066 AL356292.1-201ENST00000283110 373 ntBASIC2.95□□□□□ -1.94
SLC6A11P48066 Y_RNA.229-201ENST00000364347 113 ntBASIC2.95□□□□□ -1.94
SLC6A11P48066 MIR616-201ENST00000385293 97 ntBASIC2.95□□□□□ -1.94
SLC6A11P48066 AC006461.1-201ENST00000412637 326 ntBASIC2.95□□□□□ -1.94
SLC6A11P48066 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.95□□□□□ -1.94
SLC6A11P48066 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.95□□□□□ -1.94
SLC6A11P48066 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC6A11P48066 AC010598.1-201ENST00000510378 103 ntBASIC2.95□□□□□ -1.94
SLC6A11P48066 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC6A11P48066 RNA5SP272-201ENST00000516095 111 ntBASIC2.95□□□□□ -1.94
SLC6A11P48066 RNU7-115P-201ENST00000516433 55 ntBASIC2.95□□□□□ -1.94
SLC6A11P48066 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
SLC6A11P48066 MIR3162-201ENST00000581818 82 ntBASIC2.95□□□□□ -1.94
SLC6A11P48066 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
SLC6A11P48066 MIR7157-201ENST00000635801 60 ntBASIC2.95□□□□□ -1.94
SLC6A11P48066 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SLC6A11P48066 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
SLC6A11P48066 AC096644.4-201ENST00000563417 2912 ntBASIC2.95□□□□□ -1.94
SLC6A11P48066 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SLC6A11P48066 AC062016.1-201ENST00000355719 319 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SLC6A11P48066 SNORD114-7-201ENST00000362520 77 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 SNORA9.2-201ENST00000365361 133 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 RNU6-81P-201ENST00000365608 104 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 RNU6-144P-201ENST00000383951 107 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 SNORD21-201ENST00000383953 95 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 RNU6-1081P-201ENST00000384537 107 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 Y_RNA.568-201ENST00000384742 113 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 RPL21P3-201ENST00000395517 478 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 FO393413.1-201ENST00000402892 195 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 SNORA36B-201ENST00000410438 131 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 RNA5SP274-201ENST00000410484 108 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 RNU2-52P-201ENST00000410680 190 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 RNA5SP184-201ENST00000411071 108 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.94□□□□□ -1.94
SLC6A11P48066 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.94□□□□□ -1.94
SLC6A11P48066 HSPE1P13-201ENST00000451143 297 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 AL109933.2-201ENST00000452651 260 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 AC080013.2-201ENST00000460866 323 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 SEM1P1-201ENST00000506694 209 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 RNA5SP20-201ENST00000515976 84 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 RNU6-63P-201ENST00000516690 95 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 RNA5SP490-201ENST00000517141 136 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.94□□□□□ -1.94
SLC6A11P48066 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.94□□□□□ -1.94
SLC6A11P48066 AC022616.8-201ENST00000533569 253 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 AL391903.3-201ENST00000612158 163 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.94□□□□□ -1.94
SLC6A11P48066 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SLC6A11P48066 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.94□□□□□ -1.94
SLC6A11P48066 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SLC6A11P48066 RNU4-11P-201ENST00000365287 132 ntBASIC2.93□□□□□ -1.94
SLC6A11P48066 RNU2-32P-201ENST00000411193 191 ntBASIC2.93□□□□□ -1.94
SLC6A11P48066 AC016925.1-201ENST00000458303 298 ntBASIC2.93□□□□□ -1.94
SLC6A11P48066 RN7SL75P-201ENST00000461926 281 ntBASIC2.93□□□□□ -1.94
SLC6A11P48066 AC092185.1-201ENST00000491371 97 ntBASIC2.93□□□□□ -1.94
SLC6A11P48066 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.93□□□□□ -1.94
SLC6A11P48066 RNU6-948P-201ENST00000516374 107 ntBASIC2.93□□□□□ -1.94
SLC6A11P48066 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.93□□□□□ -1.94
SLC6A11P48066 AC018630.3-201ENST00000542637 96 ntBASIC2.93□□□□□ -1.94
SLC6A11P48066 AC107016.2-201ENST00000547968 190 ntBASIC2.93□□□□□ -1.94
SLC6A11P48066 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.93□□□□□ -1.94
SLC6A11P48066 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms