Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNU2-56P-201ENST00000516826 190 ntBASIC-0.77□□□□□ -2.53
HTTP42858 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.77□□□□□ -2.53
HTTP42858 MIR1273C-201ENST00000578669 77 ntBASIC-0.77□□□□□ -2.53
HTTP42858 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.77□□□□□ -2.53
HTTP42858 AC104260.1-201ENST00000616660 539 ntBASIC-0.77□□□□□ -2.53
HTTP42858 SNORD98-201ENST00000636377 67 ntBASIC-0.77□□□□□ -2.53
HTTP42858 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.77□□□□□ -2.53
HTTP42858 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.77□□□□□ -2.53
HTTP42858 RNU6-901P-201ENST00000384593 106 ntBASIC-0.77□□□□□ -2.53
HTTP42858 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.77□□□□□ -2.53
HTTP42858 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.77□□□□□ -2.53
HTTP42858 RNU6-572P-201ENST00000516724 80 ntBASIC-0.77□□□□□ -2.53
HTTP42858 OR4H6P-202ENST00000603819 340 ntBASIC-0.77□□□□□ -2.53
HTTP42858 AC008608.1-201ENST00000603910 127 ntBASIC-0.77□□□□□ -2.53
HTTP42858 AC020891.4-201ENST00000605745 93 ntBASIC-0.77□□□□□ -2.53
HTTP42858 AL590491.3-201ENST00000610731 82 ntBASIC-0.77□□□□□ -2.53
HTTP42858 AL359547.2-201ENST00000615810 418 ntBASIC-0.77□□□□□ -2.53
HTTP42858 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.78□□□□□ -2.53
HTTP42858 RNU6-386P-201ENST00000362650 107 ntBASIC-0.78□□□□□ -2.53
HTTP42858 RNU6-223P-201ENST00000362830 107 ntBASIC-0.78□□□□□ -2.53
HTTP42858 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.78□□□□□ -2.53
HTTP42858 RPS3AP3-201ENST00000411933 242 ntBASIC-0.78□□□□□ -2.53
HTTP42858 SUMO1P3-201ENST00000439961 304 ntBASIC-0.78□□□□□ -2.53
HTTP42858 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.78□□□□□ -2.53
HTTP42858 MTCO3P9-201ENST00000506989 781 ntBASIC-0.78□□□□□ -2.53
HTTP42858 AC115990.1-201ENST00000526957 301 ntBASIC-0.78□□□□□ -2.53
HTTP42858 AC091946.2-201ENST00000606105 291 ntBASIC-0.78□□□□□ -2.53
HTTP42858 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-0.78□□□□□ -2.53
HTTP42858 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.78□□□□□ -2.53
HTTP42858 AC092427.1-201ENST00000439177 601 ntBASIC-0.78□□□□□ -2.53
HTTP42858 AC007969.2-201ENST00000441891 191 ntBASIC-0.78□□□□□ -2.53
HTTP42858 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.78□□□□□ -2.53
HTTP42858 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.78□□□□□ -2.53
HTTP42858 AL929288.2-201ENST00000446368 407 ntBASIC-0.78□□□□□ -2.53
HTTP42858 AC244505.6-201ENST00000452829 130 ntBASIC-0.78□□□□□ -2.53
HTTP42858 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.78□□□□□ -2.53
HTTP42858 SNORD116-30-201ENST00000516468 85 ntBASIC-0.78□□□□□ -2.53
HTTP42858 AC022784.5-201ENST00000522241 437 ntBASIC-0.78□□□□□ -2.53
HTTP42858 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.78□□□□□ -2.53
HTTP42858 ELOCP32-201ENST00000548625 324 ntBASIC-0.78□□□□□ -2.53
HTTP42858 MIR3923-201ENST00000579521 83 ntBASIC-0.78□□□□□ -2.53
HTTP42858 MIR4306-201ENST00000583390 91 ntBASIC-0.78□□□□□ -2.53
HTTP42858 MIR7107-201ENST00000611489 80 ntBASIC-0.78□□□□□ -2.53
HTTP42858 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.78□□□□□ -2.53
HTTP42858 RNU6-701P-201ENST00000384059 107 ntBASIC-0.78□□□□□ -2.53
HTTP42858 TMSB4XP6-201ENST00000415187 135 ntBASIC-0.78□□□□□ -2.53
HTTP42858 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.78□□□□□ -2.53
HTTP42858 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.78□□□□□ -2.53
HTTP42858 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.78□□□□□ -2.53
HTTP42858 BNIP3P9-201ENST00000603714 553 ntBASIC-0.78□□□□□ -2.53
HTTP42858 AP000753.3-201ENST00000604083 169 ntBASIC-0.78□□□□□ -2.53
HTTP42858 AC010999.1-201ENST00000611856 324 ntBASIC-0.78□□□□□ -2.53
HTTP42858 AC005332.6-201ENST00000613178 446 ntBASIC-0.78□□□□□ -2.53
HTTP42858 SNORD24-201ENST00000383884 75 ntBASIC-0.79□□□□□ -2.54
HTTP42858 RNA5SP470-201ENST00000516463 106 ntBASIC-0.79□□□□□ -2.54
HTTP42858 MTND4P9-201ENST00000507819 1346 ntBASIC-0.79□□□□□ -2.54
HTTP42858 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.79□□□□□ -2.54
HTTP42858 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.79□□□□□ -2.54
HTTP42858 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.79□□□□□ -2.54
HTTP42858 RNU6-166P-201ENST00000384371 107 ntBASIC-0.79□□□□□ -2.54
HTTP42858 RNU6-125P-201ENST00000384505 107 ntBASIC-0.79□□□□□ -2.54
HTTP42858 MIR215-201ENST00000384858 110 ntBASIC-0.79□□□□□ -2.54
HTTP42858 AC245047.3-201ENST00000429428 127 ntBASIC-0.79□□□□□ -2.54
HTTP42858 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.79□□□□□ -2.54
HTTP42858 AP000533.3-201ENST00000447704 118 ntBASIC-0.79□□□□□ -2.54
HTTP42858 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.79□□□□□ -2.54
HTTP42858 SUMO1P1-201ENST00000497904 306 ntBASIC-0.79□□□□□ -2.54
HTTP42858 AC113347.3-201ENST00000509113 148 ntBASIC-0.79□□□□□ -2.54
HTTP42858 AP000676.1-201ENST00000533307 52 ntBASIC-0.79□□□□□ -2.54
HTTP42858 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.79□□□□□ -2.54
HTTP42858 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.79□□□□□ -2.54
HTTP42858 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.79□□□□□ -2.54
HTTP42858 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.79□□□□□ -2.54
HTTP42858 AC011458.1-201ENST00000604034 617 ntBASIC-0.79□□□□□ -2.54
HTTP42858 AC009994.1-201ENST00000606889 253 ntBASIC-0.79□□□□□ -2.54
HTTP42858 AC112204.3-201ENST00000623822 332 ntBASIC-0.79□□□□□ -2.54
HTTP42858 SNORA22B-201ENST00000383876 138 ntBASIC-0.8□□□□□ -2.54
HTTP42858 U8.15-201ENST00000390947 134 ntBASIC-0.8□□□□□ -2.54
HTTP42858 AC074085.1-201ENST00000413598 418 ntBASIC-0.8□□□□□ -2.54
HTTP42858 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-0.8□□□□□ -2.54
HTTP42858 AC120024.3-201ENST00000603167 156 ntBASIC-0.8□□□□□ -2.54
HTTP42858 AC099785.1-201ENST00000605697 437 ntBASIC-0.8□□□□□ -2.54
HTTP42858 AL596211.1-201ENST00000569873 2277 ntBASIC-0.8□□□□□ -2.54
HTTP42858 RNU6-637P-201ENST00000384050 107 ntBASIC-0.8□□□□□ -2.54
HTTP42858 RNU6-455P-201ENST00000384681 107 ntBASIC-0.8□□□□□ -2.54
HTTP42858 U8.17-201ENST00000391292 132 ntBASIC-0.8□□□□□ -2.54
HTTP42858 USP9YP28-201ENST00000435142 589 ntBASIC-0.8□□□□□ -2.54
HTTP42858 RPL39P6-201ENST00000448289 150 ntBASIC-0.8□□□□□ -2.54
HTTP42858 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.8□□□□□ -2.54
HTTP42858 MIR655-201ENST00000362159 97 ntBASIC-0.8□□□□□ -2.54
HTTP42858 AL355143.1-201ENST00000407101 841 ntBASIC-0.8□□□□□ -2.54
HTTP42858 RNU6-293P-201ENST00000411259 106 ntBASIC-0.8□□□□□ -2.54
HTTP42858 MTND1P31-201ENST00000449206 961 ntBASIC-0.8□□□□□ -2.54
HTTP42858 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.8□□□□□ -2.54
HTTP42858 AC026410.2-201ENST00000460281 156 ntBASIC-0.8□□□□□ -2.54
HTTP42858 AC016632.1-201ENST00000503994 196 ntBASIC-0.8□□□□□ -2.54
HTTP42858 AC021146.6-201ENST00000514659 117 ntBASIC-0.8□□□□□ -2.54
HTTP42858 RNU6-732P-201ENST00000516033 103 ntBASIC-0.8□□□□□ -2.54
HTTP42858 RNA5SP33-201ENST00000516687 98 ntBASIC-0.8□□□□□ -2.54
HTTP42858 AP001372.4-201ENST00000524889 472 ntBASIC-0.8□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms