Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 AC023157.2-201ENST00000540596 141 ntBASIC0.87□□□□□ -2.27
CEACAM3P40198 AL162424.1-201ENST00000602325 221 ntBASIC0.87□□□□□ -2.27
CEACAM3P40198 7SK.7-201ENST00000603504 247 ntBASIC0.87□□□□□ -2.27
CEACAM3P40198 AL513534.2-201ENST00000603836 250 ntBASIC0.87□□□□□ -2.27
CEACAM3P40198 BX284668.6-201ENST00000606899 438 ntBASIC0.87□□□□□ -2.27
CEACAM3P40198 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.87□□□□□ -2.27
CEACAM3P40198 AC010999.1-201ENST00000611856 324 ntBASIC0.87□□□□□ -2.27
CEACAM3P40198 AC015540.1-201ENST00000615828 501 ntBASIC0.87□□□□□ -2.27
CEACAM3P40198 RNU6-1059P-201ENST00000363752 98 ntBASIC0.86□□□□□ -2.27
CEACAM3P40198 RNU6-842P-201ENST00000384269 107 ntBASIC0.86□□□□□ -2.27
CEACAM3P40198 Y_RNA.554-201ENST00000384672 102 ntBASIC0.86□□□□□ -2.27
CEACAM3P40198 MIR653-201ENST00000385279 96 ntBASIC0.86□□□□□ -2.27
CEACAM3P40198 USP9YP30-201ENST00000430729 455 ntBASIC0.86□□□□□ -2.27
CEACAM3P40198 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.86□□□□□ -2.27
CEACAM3P40198 RPS29P29-201ENST00000456396 171 ntBASIC0.86□□□□□ -2.27
CEACAM3P40198 RPS29P25-201ENST00000481709 171 ntBASIC0.86□□□□□ -2.27
CEACAM3P40198 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.86□□□□□ -2.27
CEACAM3P40198 AC005840.1-201ENST00000498412 377 ntBASIC0.86□□□□□ -2.27
CEACAM3P40198 AC010598.1-201ENST00000510378 103 ntBASIC0.86□□□□□ -2.27
CEACAM3P40198 Y_RNA.683-201ENST00000516508 93 ntBASIC0.86□□□□□ -2.27
CEACAM3P40198 CYCSP23-201ENST00000519781 313 ntBASIC0.86□□□□□ -2.27
CEACAM3P40198 MIR4273-201ENST00000582824 84 ntBASIC0.86□□□□□ -2.27
CEACAM3P40198 SNORD3E-202ENST00000627253 216 ntBASIC0.86□□□□□ -2.27
CEACAM3P40198 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.86□□□□□ -2.27
CEACAM3P40198 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.86□□□□□ -2.27
CEACAM3P40198 Y_RNA.9-201ENST00000362354 101 ntBASIC0.85□□□□□ -2.27
CEACAM3P40198 Y_RNA.638-201ENST00000459374 113 ntBASIC0.85□□□□□ -2.27
CEACAM3P40198 AC010469.2-201ENST00000496412 480 ntBASIC0.85□□□□□ -2.27
CEACAM3P40198 AC097462.1-201ENST00000514125 324 ntBASIC0.85□□□□□ -2.27
CEACAM3P40198 RNU6-922P-201ENST00000516753 99 ntBASIC0.85□□□□□ -2.27
CEACAM3P40198 RNU6-273P-201ENST00000516937 96 ntBASIC0.85□□□□□ -2.27
CEACAM3P40198 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.85□□□□□ -2.27
CEACAM3P40198 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.85□□□□□ -2.27
CEACAM3P40198 AC080013.6-201ENST00000606185 215 ntBASIC0.85□□□□□ -2.27
CEACAM3P40198 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.85□□□□□ -2.27
CEACAM3P40198 AC106754.2-201ENST00000623006 233 ntBASIC0.85□□□□□ -2.27
CEACAM3P40198 RNU6-222P-201ENST00000362438 107 ntBASIC0.84□□□□□ -2.27
CEACAM3P40198 Y_RNA.89-201ENST00000363031 102 ntBASIC0.84□□□□□ -2.27
CEACAM3P40198 RNU4-76P-201ENST00000364509 141 ntBASIC0.84□□□□□ -2.27
CEACAM3P40198 Y_RNA.450-201ENST00000384198 113 ntBASIC0.84□□□□□ -2.27
CEACAM3P40198 SNORD41-201ENST00000386967 70 ntBASIC0.84□□□□□ -2.27
CEACAM3P40198 AL355796.1-201ENST00000406706 323 ntBASIC0.84□□□□□ -2.27
CEACAM3P40198 RNU6-1054P-201ENST00000411293 104 ntBASIC0.84□□□□□ -2.27
CEACAM3P40198 MTCO3P19-201ENST00000415864 321 ntBASIC0.84□□□□□ -2.27
CEACAM3P40198 USMG5P1-201ENST00000425964 177 ntBASIC0.84□□□□□ -2.27
CEACAM3P40198 STAG3L5P-204ENST00000443759 179 ntBASIC0.84□□□□□ -2.27
CEACAM3P40198 SNORD5.1-201ENST00000458800 75 ntBASIC0.84□□□□□ -2.27
CEACAM3P40198 RPS27P22-201ENST00000478056 241 ntBASIC0.84□□□□□ -2.27
CEACAM3P40198 AC027419.1-201ENST00000522976 328 ntBASIC0.84□□□□□ -2.27
CEACAM3P40198 AC093023.1-201ENST00000547375 507 ntBASIC0.84□□□□□ -2.27
CEACAM3P40198 EIF1P4-201ENST00000572664 335 ntBASIC0.84□□□□□ -2.27
CEACAM3P40198 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.84□□□□□ -2.27
CEACAM3P40198 MIR6079-201ENST00000635807 62 ntBASIC0.84□□□□□ -2.27
CEACAM3P40198 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CEACAM3P40198 Y_RNA.157-201ENST00000363638 102 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 Y_RNA.301-201ENST00000364990 103 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 RNU1-36P-201ENST00000365130 165 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 SNORA20B-201ENST00000384220 132 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 MIR19B1-201ENST00000384829 87 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 RNA5SP118-201ENST00000410385 109 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 USP9YP16-201ENST00000430287 407 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 USP9YP23-201ENST00000455085 407 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 COX6CP14-201ENST00000469580 174 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.83□□□□□ -2.28
CEACAM3P40198 AC046134.1-201ENST00000514454 666 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 RNA5SP168-201ENST00000516642 112 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 RN7SKP49-201ENST00000516675 260 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 RNU6-566P-201ENST00000516790 107 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.83□□□□□ -2.28
CEACAM3P40198 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.83□□□□□ -2.28
CEACAM3P40198 MIR5701-3-201ENST00000578890 82 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 MIR5701-1-201ENST00000585138 82 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 AC125232.2-201ENST00000592457 143 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 SNORA28-201ENST00000606769 126 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 AC100812.1-201ENST00000607622 580 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 GHRLOS.1-201ENST00000610995 70 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 MIR5701-2-201ENST00000615634 82 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 AL133216.2-202ENST00000634512 349 ntBASIC0.83□□□□□ -2.28
CEACAM3P40198 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
CEACAM3P40198 Y_RNA.106-201ENST00000363189 100 ntBASIC0.82□□□□□ -2.28
CEACAM3P40198 Y_RNA.436-201ENST00000384097 102 ntBASIC0.82□□□□□ -2.28
CEACAM3P40198 RNU6-424P-201ENST00000384367 105 ntBASIC0.82□□□□□ -2.28
CEACAM3P40198 MIR329-1-201ENST00000385028 80 ntBASIC0.82□□□□□ -2.28
CEACAM3P40198 RNU6-1001P-201ENST00000411265 100 ntBASIC0.82□□□□□ -2.28
CEACAM3P40198 ELOCP21-201ENST00000412558 336 ntBASIC0.82□□□□□ -2.28
CEACAM3P40198 AC009161.1-201ENST00000417306 376 ntBASIC0.82□□□□□ -2.28
CEACAM3P40198 AC016907.1-201ENST00000419483 435 ntBASIC0.82□□□□□ -2.28
CEACAM3P40198 EIF1P2-201ENST00000428233 350 ntBASIC0.82□□□□□ -2.28
CEACAM3P40198 CALM2P4-201ENST00000430810 426 ntBASIC0.82□□□□□ -2.28
CEACAM3P40198 AC048334.1-201ENST00000477975 159 ntBASIC0.82□□□□□ -2.28
CEACAM3P40198 HMGN1P7-201ENST00000491722 313 ntBASIC0.82□□□□□ -2.28
CEACAM3P40198 OR9P1P-201ENST00000496431 281 ntBASIC0.82□□□□□ -2.28
CEACAM3P40198 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.82□□□□□ -2.28
CEACAM3P40198 SNORA31.2-201ENST00000516019 134 ntBASIC0.82□□□□□ -2.28
CEACAM3P40198 Y_RNA.706-201ENST00000516933 99 ntBASIC0.82□□□□□ -2.28
CEACAM3P40198 RNU7-172P-201ENST00000517125 64 ntBASIC0.82□□□□□ -2.28
CEACAM3P40198 SNORA70.22-201ENST00000517160 124 ntBASIC0.82□□□□□ -2.28
CEACAM3P40198 RNU1-54P-201ENST00000517181 120 ntBASIC0.82□□□□□ -2.28
CEACAM3P40198 CBX3P8-201ENST00000532412 525 ntBASIC0.82□□□□□ -2.28
CEACAM3P40198 AC090049.2-201ENST00000550377 109 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 220.9 ms