Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.98□□□□□ -2.57
SNCAP37840 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.98□□□□□ -2.57
SNCAP37840 MIR562-201ENST00000384894 95 ntBASIC-0.98□□□□□ -2.57
SNCAP37840 MIR7-2-201ENST00000384970 110 ntBASIC-0.98□□□□□ -2.57
SNCAP37840 RNU6-205P-201ENST00000390858 107 ntBASIC-0.98□□□□□ -2.57
SNCAP37840 MIR1284-201ENST00000408337 120 ntBASIC-0.98□□□□□ -2.57
SNCAP37840 AC244250.2-201ENST00000418731 148 ntBASIC-0.98□□□□□ -2.57
SNCAP37840 PIGPP3-201ENST00000425307 415 ntBASIC-0.98□□□□□ -2.57
SNCAP37840 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.98□□□□□ -2.57
SNCAP37840 RNU6-448P-201ENST00000517052 107 ntBASIC-0.98□□□□□ -2.57
SNCAP37840 RNU6-430P-201ENST00000517078 107 ntBASIC-0.98□□□□□ -2.57
SNCAP37840 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.98□□□□□ -2.57
SNCAP37840 MTND1P8-201ENST00000571424 950 ntBASIC-0.98□□□□□ -2.57
SNCAP37840 AC120024.3-201ENST00000603167 156 ntBASIC-0.98□□□□□ -2.57
SNCAP37840 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.98□□□□□ -2.57
SNCAP37840 RNU6-236P-201ENST00000363886 106 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 RNU6-25P-201ENST00000383873 107 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 RNU6-48P-201ENST00000384161 107 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 RNU6-15P-201ENST00000384534 107 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 RNU6-29P-201ENST00000384637 107 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 MTCO3P40-201ENST00000392516 676 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 RNU6-447P-201ENST00000410293 104 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 RNU6-355P-201ENST00000410427 104 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 RNU6-791P-201ENST00000410467 104 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 RNU6-705P-201ENST00000410601 104 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 RNU6-860P-201ENST00000410860 104 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 RNU6-785P-201ENST00000411324 104 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 FCF1P9-201ENST00000412546 282 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.99□□□□□ -2.57
SNCAP37840 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.99□□□□□ -2.57
SNCAP37840 POLR2KP2-201ENST00000438155 177 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 MTND1P26-201ENST00000440488 538 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.99□□□□□ -2.57
SNCAP37840 snoU13.6-201ENST00000458785 104 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.99□□□□□ -2.57
SNCAP37840 RNU6-123P-201ENST00000516163 102 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 RNU6-341P-201ENST00000516973 96 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 RNA5SP454-201ENST00000517231 127 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 AC092574.1-201ENST00000609771 420 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 AC091304.9-201ENST00000612091 226 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 U6.90-201ENST00000614007 104 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 MIR8084-201ENST00000614105 89 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 U6.70-201ENST00000620287 104 ntBASIC-0.99□□□□□ -2.57
SNCAP37840 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.99□□□□□ -2.57
SNCAP37840 Y_RNA.251-201ENST00000364551 99 ntBASIC-1□□□□□ -2.57
SNCAP37840 RNA5SP205-201ENST00000364653 136 ntBASIC-1□□□□□ -2.57
SNCAP37840 Y_RNA.466-201ENST00000384294 113 ntBASIC-1□□□□□ -2.57
SNCAP37840 MIR125B2-201ENST00000385128 89 ntBASIC-1□□□□□ -2.57
SNCAP37840 ELOCP21-201ENST00000412558 336 ntBASIC-1□□□□□ -2.57
SNCAP37840 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1□□□□□ -2.57
SNCAP37840 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1□□□□□ -2.57
SNCAP37840 AL355994.1-201ENST00000424379 260 ntBASIC-1□□□□□ -2.57
SNCAP37840 SNORD123-201ENST00000459473 70 ntBASIC-1□□□□□ -2.57
SNCAP37840 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1□□□□□ -2.57
SNCAP37840 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-1□□□□□ -2.57
SNCAP37840 AC010424.1-201ENST00000506336 297 ntBASIC-1□□□□□ -2.57
SNCAP37840 PRDX4P1-201ENST00000507189 574 ntBASIC-1□□□□□ -2.57
SNCAP37840 RNU2-12P-201ENST00000517216 168 ntBASIC-1□□□□□ -2.57
SNCAP37840 AC068587.5-201ENST00000528506 175 ntBASIC-1□□□□□ -2.57
SNCAP37840 AP002004.2-201ENST00000531656 154 ntBASIC-1□□□□□ -2.57
SNCAP37840 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1□□□□□ -2.57
SNCAP37840 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1□□□□□ -2.57
SNCAP37840 MIR4438-201ENST00000585271 93 ntBASIC-1□□□□□ -2.57
SNCAP37840 AP002802.2-201ENST00000605877 235 ntBASIC-1□□□□□ -2.57
SNCAP37840 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-1□□□□□ -2.57
SNCAP37840 Y_RNA.192-201ENST00000363977 102 ntBASIC-1.01□□□□□ -2.57
SNCAP37840 Y_RNA.267-201ENST00000364679 109 ntBASIC-1.01□□□□□ -2.57
SNCAP37840 AC117470.1-201ENST00000381974 330 ntBASIC-1.01□□□□□ -2.57
SNCAP37840 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.01□□□□□ -2.57
SNCAP37840 MIR136-201ENST00000385207 82 ntBASIC-1.01□□□□□ -2.57
SNCAP37840 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.01□□□□□ -2.57
SNCAP37840 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-1.01□□□□□ -2.57
SNCAP37840 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-1.01□□□□□ -2.57
SNCAP37840 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.01□□□□□ -2.57
SNCAP37840 RNA5SP47-201ENST00000517230 109 ntBASIC-1.01□□□□□ -2.57
SNCAP37840 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-1.01□□□□□ -2.57
SNCAP37840 AC018448.1-201ENST00000552843 316 ntBASIC-1.01□□□□□ -2.57
SNCAP37840 BNIP3P26-201ENST00000600827 554 ntBASIC-1.01□□□□□ -2.57
SNCAP37840 AC012467.1-201ENST00000607740 256 ntBASIC-1.01□□□□□ -2.57
SNCAP37840 AL078596.1-201ENST00000624856 447 ntBASIC-1.01□□□□□ -2.57
SNCAP37840 AC091304.10-201ENST00000641554 121 ntBASIC-1.01□□□□□ -2.57
SNCAP37840 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.02□□□□□ -2.57
SNCAP37840 RNU6-207P-201ENST00000384137 107 ntBASIC-1.02□□□□□ -2.57
SNCAP37840 RNU6-364P-201ENST00000384387 107 ntBASIC-1.02□□□□□ -2.57
SNCAP37840 RNU2-54P-201ENST00000410299 190 ntBASIC-1.02□□□□□ -2.57
SNCAP37840 MRPS10P1-201ENST00000448483 130 ntBASIC-1.02□□□□□ -2.57
SNCAP37840 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-1.02□□□□□ -2.57
SNCAP37840 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-1.02□□□□□ -2.57
SNCAP37840 AC016911.1-201ENST00000613297 452 ntBASIC-1.02□□□□□ -2.57
SNCAP37840 MIR6507-201ENST00000613630 70 ntBASIC-1.02□□□□□ -2.57
SNCAP37840 uc_338.22-201ENST00000622722 187 ntBASIC-1.02□□□□□ -2.57
SNCAP37840 U8.5-201ENST00000364528 136 ntBASIC-1.03□□□□□ -2.57
SNCAP37840 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.03□□□□□ -2.57
SNCAP37840 MIR604-201ENST00000384880 94 ntBASIC-1.03□□□□□ -2.57
SNCAP37840 MIR15B-201ENST00000385045 98 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms