Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 MTND4P28-201ENST00000426217 387 ntBASIC1.73□□□□□ -2.13
HOXD13P35453 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.73□□□□□ -2.13
HOXD13P35453 MRPS10P1-201ENST00000448483 130 ntBASIC1.73□□□□□ -2.13
HOXD13P35453 SUMO1P2-201ENST00000452524 304 ntBASIC1.73□□□□□ -2.13
HOXD13P35453 RPS26P45-201ENST00000471748 340 ntBASIC1.73□□□□□ -2.13
HOXD13P35453 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.73□□□□□ -2.13
HOXD13P35453 SNORA40.9-201ENST00000515895 93 ntBASIC1.73□□□□□ -2.13
HOXD13P35453 MIR4801-201ENST00000582704 82 ntBASIC1.73□□□□□ -2.13
HOXD13P35453 MIR8063-201ENST00000621930 81 ntBASIC1.73□□□□□ -2.13
HOXD13P35453 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HOXD13P35453 MIR410-201ENST00000362222 80 ntBASIC1.72□□□□□ -2.13
HOXD13P35453 RNU6-271P-201ENST00000363858 105 ntBASIC1.72□□□□□ -2.13
HOXD13P35453 RNA5SP109-201ENST00000391010 116 ntBASIC1.72□□□□□ -2.13
HOXD13P35453 RPL21P1-201ENST00000399532 476 ntBASIC1.72□□□□□ -2.13
HOXD13P35453 RN7SKP200-201ENST00000410564 320 ntBASIC1.72□□□□□ -2.13
HOXD13P35453 Y_RNA.605-201ENST00000410577 105 ntBASIC1.72□□□□□ -2.13
HOXD13P35453 MTCO2P27-201ENST00000420740 428 ntBASIC1.72□□□□□ -2.13
HOXD13P35453 AC010154.1-201ENST00000425857 269 ntBASIC1.72□□□□□ -2.13
HOXD13P35453 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.72□□□□□ -2.13
HOXD13P35453 U8.22-201ENST00000459141 133 ntBASIC1.72□□□□□ -2.13
HOXD13P35453 AC010469.2-201ENST00000496412 480 ntBASIC1.72□□□□□ -2.13
HOXD13P35453 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.72□□□□□ -2.13
HOXD13P35453 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.72□□□□□ -2.13
HOXD13P35453 AC027419.1-201ENST00000522976 328 ntBASIC1.72□□□□□ -2.13
HOXD13P35453 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.72□□□□□ -2.13
HOXD13P35453 RPL21P9-201ENST00000556149 474 ntBASIC1.72□□□□□ -2.13
HOXD13P35453 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.72□□□□□ -2.13
HOXD13P35453 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.72□□□□□ -2.13
HOXD13P35453 MIR3674-201ENST00000636576 68 ntBASIC1.72□□□□□ -2.13
HOXD13P35453 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HOXD13P35453 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HOXD13P35453 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
HOXD13P35453 SNORA17.3-201ENST00000391159 129 ntBASIC1.71□□□□□ -2.14
HOXD13P35453 Y_RNA.592-201ENST00000410274 109 ntBASIC1.71□□□□□ -2.14
HOXD13P35453 SNORD12B-201ENST00000410433 91 ntBASIC1.71□□□□□ -2.14
HOXD13P35453 MTCO3P19-201ENST00000415864 321 ntBASIC1.71□□□□□ -2.14
HOXD13P35453 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.71□□□□□ -2.14
HOXD13P35453 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.71□□□□□ -2.14
HOXD13P35453 AC099799.1-201ENST00000439809 192 ntBASIC1.71□□□□□ -2.14
HOXD13P35453 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
HOXD13P35453 U6.108-201ENST00000637764 58 ntBASIC1.71□□□□□ -2.14
HOXD13P35453 MIR1302-1-201ENST00000637932 143 ntBASIC1.71□□□□□ -2.14
HOXD13P35453 Y_RNA.70-201ENST00000362886 110 ntBASIC1.7□□□□□ -2.14
HOXD13P35453 RNU4-42P-201ENST00000364738 142 ntBASIC1.7□□□□□ -2.14
HOXD13P35453 SNORA4.2-201ENST00000365313 147 ntBASIC1.7□□□□□ -2.14
HOXD13P35453 RNU6-318P-201ENST00000384283 103 ntBASIC1.7□□□□□ -2.14
HOXD13P35453 MIR562-201ENST00000384894 95 ntBASIC1.7□□□□□ -2.14
HOXD13P35453 RNU6-1009P-201ENST00000390996 107 ntBASIC1.7□□□□□ -2.14
HOXD13P35453 MRPL42P3-201ENST00000401492 326 ntBASIC1.7□□□□□ -2.14
HOXD13P35453 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.7□□□□□ -2.14
HOXD13P35453 AC245047.3-201ENST00000429428 127 ntBASIC1.7□□□□□ -2.14
HOXD13P35453 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.7□□□□□ -2.14
HOXD13P35453 AC245517.4-201ENST00000448601 281 ntBASIC1.7□□□□□ -2.14
HOXD13P35453 AC079140.2-201ENST00000506193 142 ntBASIC1.7□□□□□ -2.14
HOXD13P35453 AC023157.2-201ENST00000540596 141 ntBASIC1.7□□□□□ -2.14
HOXD13P35453 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.7□□□□□ -2.14
HOXD13P35453 AL357075.2-201ENST00000614906 189 ntBASIC1.7□□□□□ -2.14
HOXD13P35453 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.7□□□□□ -2.14
HOXD13P35453 RNU6-1301P-201ENST00000362724 104 ntBASIC1.69□□□□□ -2.14
HOXD13P35453 RNU6-490P-201ENST00000362985 107 ntBASIC1.69□□□□□ -2.14
HOXD13P35453 RNU1-17P-201ENST00000363022 152 ntBASIC1.69□□□□□ -2.14
HOXD13P35453 RNU4-13P-201ENST00000364019 141 ntBASIC1.69□□□□□ -2.14
HOXD13P35453 SNORA20B-201ENST00000384220 132 ntBASIC1.69□□□□□ -2.14
HOXD13P35453 MIR628-201ENST00000385229 95 ntBASIC1.69□□□□□ -2.14
HOXD13P35453 RNU6-1304P-201ENST00000411374 106 ntBASIC1.69□□□□□ -2.14
HOXD13P35453 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.69□□□□□ -2.14
HOXD13P35453 AC005002.2-201ENST00000438228 269 ntBASIC1.69□□□□□ -2.14
HOXD13P35453 RNA5SP445-201ENST00000515889 115 ntBASIC1.69□□□□□ -2.14
HOXD13P35453 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.69□□□□□ -2.14
HOXD13P35453 AL162424.1-201ENST00000602325 221 ntBASIC1.69□□□□□ -2.14
HOXD13P35453 AL645939.4-201ENST00000604495 135 ntBASIC1.69□□□□□ -2.14
HOXD13P35453 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.69□□□□□ -2.14
HOXD13P35453 AC018630.2-201ENST00000534866 2403 ntBASIC1.68□□□□□ -2.14
HOXD13P35453 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HOXD13P35453 Y_RNA.314-201ENST00000365114 102 ntBASIC1.68□□□□□ -2.14
HOXD13P35453 MIR320A-201ENST00000385302 82 ntBASIC1.68□□□□□ -2.14
HOXD13P35453 RNY4P36-201ENST00000391116 96 ntBASIC1.68□□□□□ -2.14
HOXD13P35453 AC004965.1-201ENST00000413033 213 ntBASIC1.68□□□□□ -2.14
HOXD13P35453 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.68□□□□□ -2.14
HOXD13P35453 RAB28P5-201ENST00000427490 651 ntBASIC1.68□□□□□ -2.14
HOXD13P35453 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.68□□□□□ -2.14
HOXD13P35453 MTCO3P10-201ENST00000455912 772 ntBASIC1.68□□□□□ -2.14
HOXD13P35453 ELOCP24-201ENST00000456370 334 ntBASIC1.68□□□□□ -2.14
HOXD13P35453 RPS26P55-201ENST00000471178 356 ntBASIC1.68□□□□□ -2.14
HOXD13P35453 RNU7-172P-201ENST00000517125 64 ntBASIC1.68□□□□□ -2.14
HOXD13P35453 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.68□□□□□ -2.14
HOXD13P35453 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.68□□□□□ -2.14
HOXD13P35453 MIR548S-201ENST00000581352 82 ntBASIC1.68□□□□□ -2.14
HOXD13P35453 AL929325.1-201ENST00000603096 117 ntBASIC1.68□□□□□ -2.14
HOXD13P35453 AL132765.2-201ENST00000610812 351 ntBASIC1.68□□□□□ -2.14
HOXD13P35453 MIR8054-201ENST00000620877 86 ntBASIC1.68□□□□□ -2.14
HOXD13P35453 MTND4LP32-201ENST00000636111 270 ntBASIC1.68□□□□□ -2.14
HOXD13P35453 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HOXD13P35453 MTND5P10-201ENST00000603719 1809 ntBASIC1.68□□□□□ -2.14
HOXD13P35453 RNU6-1123P-201ENST00000362347 106 ntBASIC1.67□□□□□ -2.14
HOXD13P35453 RNU6-1065P-201ENST00000384513 106 ntBASIC1.67□□□□□ -2.14
HOXD13P35453 AL034345.1-201ENST00000407768 123 ntBASIC1.67□□□□□ -2.14
HOXD13P35453 AL161935.2-201ENST00000414627 60 ntBASIC1.67□□□□□ -2.14
HOXD13P35453 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.67□□□□□ -2.14
HOXD13P35453 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms