Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RNU6-424P-201ENST00000384367 105 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 Y_RNA.552-201ENST00000384665 112 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.21□□□□□ -2.38
COL4A5P29400 AL353572.1-201ENST00000442490 417 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 MTCO1P19-201ENST00000443487 500 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.21□□□□□ -2.38
COL4A5P29400 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.21□□□□□ -2.38
COL4A5P29400 RNA5SP134-201ENST00000516492 96 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 AC022868.1-201ENST00000517767 391 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
COL4A5P29400 AC087683.1-201ENST00000591187 441 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 MIR8076-201ENST00000611401 83 ntBASIC0.21□□□□□ -2.38
COL4A5P29400 MIR513B-201ENST00000385136 84 ntBASIC0.2□□□□□ -2.38
COL4A5P29400 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.2□□□□□ -2.38
COL4A5P29400 Y_RNA.610-201ENST00000410681 103 ntBASIC0.2□□□□□ -2.38
COL4A5P29400 RPL23AP50-201ENST00000434149 455 ntBASIC0.2□□□□□ -2.38
COL4A5P29400 AL162725.1-201ENST00000435405 301 ntBASIC0.2□□□□□ -2.38
COL4A5P29400 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.2□□□□□ -2.38
COL4A5P29400 AC005002.2-201ENST00000438228 269 ntBASIC0.2□□□□□ -2.38
COL4A5P29400 AC104332.1-201ENST00000440471 797 ntBASIC0.2□□□□□ -2.38
COL4A5P29400 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.2□□□□□ -2.38
COL4A5P29400 ZNF114P1-201ENST00000453500 292 ntBASIC0.2□□□□□ -2.38
COL4A5P29400 AC010469.2-201ENST00000496412 480 ntBASIC0.2□□□□□ -2.38
COL4A5P29400 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.2□□□□□ -2.38
COL4A5P29400 MTATP6P9-201ENST00000515039 680 ntBASIC0.2□□□□□ -2.38
COL4A5P29400 RNU6-58P-201ENST00000517143 103 ntBASIC0.2□□□□□ -2.38
COL4A5P29400 AP001372.4-201ENST00000524889 472 ntBASIC0.2□□□□□ -2.38
COL4A5P29400 DEFB131C-201ENST00000528817 165 ntBASIC0.2□□□□□ -2.38
COL4A5P29400 MIR4778-201ENST00000577635 80 ntBASIC0.2□□□□□ -2.38
COL4A5P29400 AC004832.4-201ENST00000608952 331 ntBASIC0.2□□□□□ -2.38
COL4A5P29400 AC006435.5-201ENST00000624486 112 ntBASIC0.2□□□□□ -2.38
COL4A5P29400 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
COL4A5P29400 RNU6-348P-201ENST00000384386 107 ntBASIC0.19□□□□□ -2.38
COL4A5P29400 AL606923.1-201ENST00000406616 190 ntBASIC0.19□□□□□ -2.38
COL4A5P29400 AC004866.1-201ENST00000411748 78 ntBASIC0.19□□□□□ -2.38
COL4A5P29400 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.19□□□□□ -2.38
COL4A5P29400 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.19□□□□□ -2.38
COL4A5P29400 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.19□□□□□ -2.38
COL4A5P29400 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
COL4A5P29400 MIR4667-201ENST00000578933 66 ntBASIC0.19□□□□□ -2.38
COL4A5P29400 AC234772.3-201ENST00000602277 528 ntBASIC0.19□□□□□ -2.38
COL4A5P29400 AP001596.2-201ENST00000608410 312 ntBASIC0.19□□□□□ -2.38
COL4A5P29400 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.19□□□□□ -2.38
COL4A5P29400 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
COL4A5P29400 Y_RNA.123-201ENST00000363338 102 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 SNORD113.3-201ENST00000364630 78 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 AL049545.1-201ENST00000401856 572 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 MIR1468-201ENST00000410600 86 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 AC244098.3-201ENST00000424803 96 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.18□□□□□ -2.38
COL4A5P29400 SNORD11.1-201ENST00000459482 85 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.18□□□□□ -2.38
COL4A5P29400 RNU6-917P-201ENST00000516294 104 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 Y_RNA.700-201ENST00000516806 100 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 AL157687.1-201ENST00000554853 619 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 AC011195.1-201ENST00000578177 177 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 AC004223.2-201ENST00000590309 544 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 AL022161.1-201ENST00000604390 213 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 AC007014.2-201ENST00000615581 479 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 Y_RNA.457-201ENST00000384237 111 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 RNU6-925P-201ENST00000384629 104 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.18□□□□□ -2.38
COL4A5P29400 AC093850.1-201ENST00000454121 251 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 RPL39P5-202ENST00000512505 151 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 SNORA70.12-201ENST00000516084 153 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 RNU2-56P-201ENST00000516826 190 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 RNU1-117P-201ENST00000517041 158 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 AC027419.1-201ENST00000522976 328 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 AP002963.1-201ENST00000530590 184 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 SCOCP1-201ENST00000554676 349 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.18□□□□□ -2.38
COL4A5P29400 AC090616.2-202ENST00000584248 222 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 AC091178.2-201ENST00000584401 117 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 AC104695.3-201ENST00000604052 296 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 RMST_3.1-201ENST00000611651 109 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 AC005609.4-201ENST00000625071 447 ntBASIC0.18□□□□□ -2.38
COL4A5P29400 AP000568.1-201ENST00000282964 442 ntBASIC0.17□□□□□ -2.38
COL4A5P29400 MIR101-1-201ENST00000362265 75 ntBASIC0.17□□□□□ -2.38
COL4A5P29400 RNA5SP264-201ENST00000363115 107 ntBASIC0.17□□□□□ -2.38
COL4A5P29400 SNORD114-31-201ENST00000363219 75 ntBASIC0.17□□□□□ -2.38
COL4A5P29400 SNORD115-8-201ENST00000363856 82 ntBASIC0.17□□□□□ -2.38
COL4A5P29400 SNORD115-38-201ENST00000365037 82 ntBASIC0.17□□□□□ -2.38
COL4A5P29400 RNU6-1327P-201ENST00000365302 105 ntBASIC0.17□□□□□ -2.38
COL4A5P29400 SNORA36.2-201ENST00000384004 127 ntBASIC0.17□□□□□ -2.38
COL4A5P29400 MTCYBP4-201ENST00000401524 249 ntBASIC0.17□□□□□ -2.38
COL4A5P29400 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.17□□□□□ -2.38
COL4A5P29400 Z98949.2-201ENST00000440996 144 ntBASIC0.17□□□□□ -2.38
COL4A5P29400 HSFY5P-201ENST00000453726 309 ntBASIC0.17□□□□□ -2.38
COL4A5P29400 RNU6-341P-201ENST00000516973 96 ntBASIC0.17□□□□□ -2.38
COL4A5P29400 AC026371.1-201ENST00000551867 419 ntBASIC0.17□□□□□ -2.38
COL4A5P29400 AGGF1P4-201ENST00000568249 801 ntBASIC0.17□□□□□ -2.38
COL4A5P29400 MIR5093-201ENST00000583199 100 ntBASIC0.17□□□□□ -2.38
COL4A5P29400 AC064836.2-201ENST00000609491 462 ntBASIC0.17□□□□□ -2.38
COL4A5P29400 AC027279.3-201ENST00000625055 122 ntBASIC0.17□□□□□ -2.38
COL4A5P29400 RNU4-66P-201ENST00000365199 138 ntBASIC0.16□□□□□ -2.38
COL4A5P29400 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.16□□□□□ -2.38
COL4A5P29400 AL590002.1-201ENST00000406554 418 ntBASIC0.16□□□□□ -2.38
COL4A5P29400 RNU2-9P-201ENST00000410194 145 ntBASIC0.16□□□□□ -2.38
COL4A5P29400 RNA5SP222-201ENST00000411039 105 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms