Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 RNU6-855P-201ENST00000410395 104 ntBASIC2.74□□□□□ -1.97
KRT4P19013 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.74□□□□□ -1.97
KRT4P19013 AC004386.2-201ENST00000441858 148 ntBASIC2.74□□□□□ -1.97
KRT4P19013 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.74□□□□□ -1.97
KRT4P19013 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.74□□□□□ -1.97
KRT4P19013 RNU6-453P-201ENST00000516819 85 ntBASIC2.74□□□□□ -1.97
KRT4P19013 MIR4446-201ENST00000578505 67 ntBASIC2.74□□□□□ -1.97
KRT4P19013 AC011603.4-201ENST00000611325 277 ntBASIC2.74□□□□□ -1.97
KRT4P19013 AP001340.1-201ENST00000624405 217 ntBASIC2.74□□□□□ -1.97
KRT4P19013 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.74□□□□□ -1.97
KRT4P19013 AC131280.1-202ENST00000624067 4211 ntBASIC2.73□□□□□ -1.97
KRT4P19013 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
KRT4P19013 U3.9-201ENST00000363823 204 ntBASIC2.73□□□□□ -1.97
KRT4P19013 RNU6-1048P-201ENST00000364054 107 ntBASIC2.73□□□□□ -1.97
KRT4P19013 SNORD87-201ENST00000364849 89 ntBASIC2.73□□□□□ -1.97
KRT4P19013 RNA5SP267-201ENST00000364893 126 ntBASIC2.73□□□□□ -1.97
KRT4P19013 RNU6-969P-201ENST00000383900 105 ntBASIC2.73□□□□□ -1.97
KRT4P19013 RNU6-1083P-201ENST00000384022 107 ntBASIC2.73□□□□□ -1.97
KRT4P19013 RNU6-19P-201ENST00000384718 107 ntBASIC2.73□□□□□ -1.97
KRT4P19013 MIR147B-201ENST00000390185 80 ntBASIC2.73□□□□□ -1.97
KRT4P19013 PTGES3P4-201ENST00000426243 356 ntBASIC2.73□□□□□ -1.97
KRT4P19013 AC027124.2-201ENST00000428249 105 ntBASIC2.73□□□□□ -1.97
KRT4P19013 AC022018.1-201ENST00000430685 241 ntBASIC2.73□□□□□ -1.97
KRT4P19013 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.73□□□□□ -1.97
KRT4P19013 snoU13.14-201ENST00000459372 104 ntBASIC2.73□□□□□ -1.97
KRT4P19013 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.73□□□□□ -1.97
KRT4P19013 RN7SKP179-201ENST00000516126 217 ntBASIC2.73□□□□□ -1.97
KRT4P19013 SNORA74D-201ENST00000516404 141 ntBASIC2.73□□□□□ -1.97
KRT4P19013 RNU6-659P-201ENST00000516454 104 ntBASIC2.73□□□□□ -1.97
KRT4P19013 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.73□□□□□ -1.97
KRT4P19013 AC034105.4-201ENST00000568304 277 ntBASIC2.73□□□□□ -1.97
KRT4P19013 MIR5194-201ENST00000582634 120 ntBASIC2.73□□□□□ -1.97
KRT4P19013 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.73□□□□□ -1.97
KRT4P19013 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.73□□□□□ -1.97
KRT4P19013 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
KRT4P19013 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KRT4P19013 RNU6-1010P-201ENST00000362757 107 ntBASIC2.72□□□□□ -1.97
KRT4P19013 Y_RNA.310-201ENST00000365063 113 ntBASIC2.72□□□□□ -1.97
KRT4P19013 RNU6-407P-201ENST00000365280 104 ntBASIC2.72□□□□□ -1.97
KRT4P19013 Y_RNA.361-201ENST00000365515 120 ntBASIC2.72□□□□□ -1.97
KRT4P19013 Y_RNA.572-201ENST00000384757 98 ntBASIC2.72□□□□□ -1.97
KRT4P19013 MIR218-1-201ENST00000384999 110 ntBASIC2.72□□□□□ -1.97
KRT4P19013 MIR15B-201ENST00000385045 98 ntBASIC2.72□□□□□ -1.97
KRT4P19013 MIR134-201ENST00000385258 73 ntBASIC2.72□□□□□ -1.97
KRT4P19013 AC004866.1-201ENST00000411748 78 ntBASIC2.72□□□□□ -1.97
KRT4P19013 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.72□□□□□ -1.97
KRT4P19013 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.72□□□□□ -1.97
KRT4P19013 AC245047.8-201ENST00000456455 284 ntBASIC2.72□□□□□ -1.97
KRT4P19013 AL441985.1-201ENST00000457727 251 ntBASIC2.72□□□□□ -1.97
KRT4P19013 RNU7-141P-201ENST00000459304 62 ntBASIC2.72□□□□□ -1.97
KRT4P19013 AC083906.5-201ENST00000503722 328 ntBASIC2.72□□□□□ -1.97
KRT4P19013 SNORA70.12-201ENST00000516084 153 ntBASIC2.72□□□□□ -1.97
KRT4P19013 SCARNA11.3-201ENST00000517276 130 ntBASIC2.72□□□□□ -1.97
KRT4P19013 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.72□□□□□ -1.97
KRT4P19013 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.72□□□□□ -1.97
KRT4P19013 MIR3199-1-201ENST00000582434 88 ntBASIC2.72□□□□□ -1.97
KRT4P19013 MIR5006-201ENST00000583027 110 ntBASIC2.72□□□□□ -1.97
KRT4P19013 RPS15AP11-201ENST00000594193 385 ntBASIC2.72□□□□□ -1.97
KRT4P19013 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.72□□□□□ -1.97
KRT4P19013 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.72□□□□□ -1.97
KRT4P19013 MIR6844-201ENST00000637122 62 ntBASIC2.72□□□□□ -1.97
KRT4P19013 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRT4P19013 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRT4P19013 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.71□□□□□ -1.98
KRT4P19013 U3.8-201ENST00000363675 217 ntBASIC2.71□□□□□ -1.98
KRT4P19013 RNU6-728P-201ENST00000365375 104 ntBASIC2.71□□□□□ -1.98
KRT4P19013 MIR449B-201ENST00000384995 97 ntBASIC2.71□□□□□ -1.98
KRT4P19013 RNA5SP504-201ENST00000410676 117 ntBASIC2.71□□□□□ -1.98
KRT4P19013 AC104389.3-201ENST00000445629 235 ntBASIC2.71□□□□□ -1.98
KRT4P19013 RPS27P1-201ENST00000450552 247 ntBASIC2.71□□□□□ -1.98
KRT4P19013 AC092991.1-201ENST00000477176 376 ntBASIC2.71□□□□□ -1.98
KRT4P19013 RNU1-117P-201ENST00000517041 158 ntBASIC2.71□□□□□ -1.98
KRT4P19013 AP001328.1-201ENST00000528550 176 ntBASIC2.71□□□□□ -1.98
KRT4P19013 MIR4724-201ENST00000579485 89 ntBASIC2.71□□□□□ -1.98
KRT4P19013 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.71□□□□□ -1.98
KRT4P19013 AL356280.1-201ENST00000603614 379 ntBASIC2.71□□□□□ -1.98
KRT4P19013 AC091152.3-201ENST00000604227 325 ntBASIC2.71□□□□□ -1.98
KRT4P19013 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.71□□□□□ -1.98
KRT4P19013 U7.2-201ENST00000607576 63 ntBASIC2.71□□□□□ -1.98
KRT4P19013 U6.115-201ENST00000636045 103 ntBASIC2.71□□□□□ -1.98
KRT4P19013 AC000403.1-201ENST00000613696 3585 ntBASIC2.7□□□□□ -1.98
KRT4P19013 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
KRT4P19013 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
KRT4P19013 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.7□□□□□ -1.98
KRT4P19013 MIR367-201ENST00000362299 68 ntBASIC2.7□□□□□ -1.98
KRT4P19013 RNU4-15P-201ENST00000362613 141 ntBASIC2.7□□□□□ -1.98
KRT4P19013 RNU6-529P-201ENST00000363383 104 ntBASIC2.7□□□□□ -1.98
KRT4P19013 SNORA25.6-201ENST00000364121 118 ntBASIC2.7□□□□□ -1.98
KRT4P19013 Y_RNA.229-201ENST00000364347 113 ntBASIC2.7□□□□□ -1.98
KRT4P19013 AL606845.1-201ENST00000404881 255 ntBASIC2.7□□□□□ -1.98
KRT4P19013 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.7□□□□□ -1.98
KRT4P19013 RNU7-26P-201ENST00000458980 63 ntBASIC2.7□□□□□ -1.98
KRT4P19013 SRIP1-201ENST00000489235 288 ntBASIC2.7□□□□□ -1.98
KRT4P19013 PDCD5P2-201ENST00000507570 312 ntBASIC2.7□□□□□ -1.98
KRT4P19013 AC023141.11-201ENST00000508864 202 ntBASIC2.7□□□□□ -1.98
KRT4P19013 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.7□□□□□ -1.98
KRT4P19013 RNA5SP367-201ENST00000516557 118 ntBASIC2.7□□□□□ -1.98
KRT4P19013 RNU2-44P-201ENST00000516795 194 ntBASIC2.7□□□□□ -1.98
KRT4P19013 ZNF271P-202ENST00000465539 1970 ntBASIC2.7□□□□□ -1.98
KRT4P19013 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms