Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CD44P16070 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
CD44P16070 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CD44P16070 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CD44P16070 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CD44P16070 RNA5SP175-201ENST00000364275 119 ntBASIC4.73□□□□□ -1.65
CD44P16070 SNORA37-201ENST00000384504 129 ntBASIC4.73□□□□□ -1.65
CD44P16070 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CD44P16070 RNU6-1321P-201ENST00000390905 107 ntBASIC4.73□□□□□ -1.65
CD44P16070 SNORA11F-201ENST00000408237 128 ntBASIC4.73□□□□□ -1.65
CD44P16070 RNU7-35P-201ENST00000517174 62 ntBASIC4.73□□□□□ -1.65
CD44P16070 Mico1.1-201ENST00000611698 204 ntBASIC4.73□□□□□ -1.65
CD44P16070 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.73□□□□□ -1.65
CD44P16070 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.73□□□□□ -1.65
CD44P16070 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.73□□□□□ -1.65
CD44P16070 ZNF962P-201ENST00000443465 3140 ntBASIC4.73□□□□□ -1.65
CD44P16070 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD44P16070 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD44P16070 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD44P16070 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD44P16070 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD44P16070 MIR129-1-201ENST00000384972 72 ntBASIC4.72□□□□□ -1.65
CD44P16070 RNA5SP129-201ENST00000410276 118 ntBASIC4.72□□□□□ -1.65
CD44P16070 AL157831.1-201ENST00000426134 473 ntBASIC4.72□□□□□ -1.65
CD44P16070 RNU7-23P-201ENST00000459465 62 ntBASIC4.72□□□□□ -1.65
CD44P16070 AP002884.2-201ENST00000471647 395 ntBASIC4.72□□□□□ -1.65
CD44P16070 AL592156.1-201ENST00000508758 304 ntBASIC4.72□□□□□ -1.65
CD44P16070 AC103810.1-201ENST00000579873 453 ntBASIC4.72□□□□□ -1.65
CD44P16070 AC113403.1-201ENST00000604910 193 ntBASIC4.72□□□□□ -1.65
CD44P16070 CTSLP2-204ENST00000629029 392 ntBASIC4.72□□□□□ -1.65
CD44P16070 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD44P16070 PWAR6-201ENST00000552334 4618 ntBASIC4.72□□□□□ -1.65
CD44P16070 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.72□□□□□ -1.65
CD44P16070 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.72□□□□□ -1.65
CD44P16070 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.72□□□□□ -1.65
CD44P16070 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.71□□□□□ -1.65
CD44P16070 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.71□□□□□ -1.65
CD44P16070 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD44P16070 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CD44P16070 Y_RNA.443-201ENST00000384135 111 ntBASIC4.71□□□□□ -1.66
CD44P16070 RNU6-424P-201ENST00000384367 105 ntBASIC4.71□□□□□ -1.66
CD44P16070 RNU6-342P-201ENST00000384521 104 ntBASIC4.71□□□□□ -1.66
CD44P16070 RNA5SP332-201ENST00000391063 115 ntBASIC4.71□□□□□ -1.66
CD44P16070 AC123900.1-201ENST00000420390 96 ntBASIC4.71□□□□□ -1.66
CD44P16070 AC092628.1-201ENST00000436250 252 ntBASIC4.71□□□□□ -1.66
CD44P16070 SNORD67.1-201ENST00000516618 108 ntBASIC4.71□□□□□ -1.66
CD44P16070 RNU7-53P-201ENST00000516705 60 ntBASIC4.71□□□□□ -1.66
CD44P16070 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC4.71□□□□□ -1.66
CD44P16070 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.71□□□□□ -1.66
CD44P16070 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD44P16070 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.71□□□□□ -1.66
CD44P16070 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD44P16070 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
CD44P16070 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD44P16070 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.7□□□□□ -1.66
CD44P16070 MIR340-201ENST00000362125 95 ntBASIC4.7□□□□□ -1.66
CD44P16070 SNORA70.2-201ENST00000364506 135 ntBASIC4.7□□□□□ -1.66
CD44P16070 RNA5SP296-201ENST00000410523 111 ntBASIC4.7□□□□□ -1.66
CD44P16070 AC110620.1-201ENST00000416042 228 ntBASIC4.7□□□□□ -1.66
CD44P16070 AL590139.1-201ENST00000416267 400 ntBASIC4.7□□□□□ -1.66
CD44P16070 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC4.7□□□□□ -1.66
CD44P16070 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.7□□□□□ -1.66
CD44P16070 RNA5SP310-201ENST00000459084 116 ntBASIC4.7□□□□□ -1.66
CD44P16070 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CD44P16070 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD44P16070 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD44P16070 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.7□□□□□ -1.66
CD44P16070 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD44P16070 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CD44P16070 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD44P16070 RNU6-208P-201ENST00000362431 107 ntBASIC4.69□□□□□ -1.66
CD44P16070 RN7SKP103-201ENST00000363848 320 ntBASIC4.69□□□□□ -1.66
CD44P16070 SNORA70.7-201ENST00000384159 133 ntBASIC4.69□□□□□ -1.66
CD44P16070 SNORA8.1-201ENST00000384250 140 ntBASIC4.69□□□□□ -1.66
CD44P16070 MIR607-201ENST00000385241 96 ntBASIC4.69□□□□□ -1.66
CD44P16070 RNA5SP292-201ENST00000390974 118 ntBASIC4.69□□□□□ -1.66
CD44P16070 AC006466.1-201ENST00000438721 289 ntBASIC4.69□□□□□ -1.66
CD44P16070 RN7SL691P-201ENST00000494487 301 ntBASIC4.69□□□□□ -1.66
CD44P16070 RNA5SP360-201ENST00000516555 118 ntBASIC4.69□□□□□ -1.66
CD44P16070 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.69□□□□□ -1.66
CD44P16070 MIR4511-201ENST00000582784 87 ntBASIC4.69□□□□□ -1.66
CD44P16070 MIR8066-201ENST00000617280 78 ntBASIC4.69□□□□□ -1.66
CD44P16070 AC103706.3-201ENST00000636297 85 ntBASIC4.69□□□□□ -1.66
CD44P16070 MIR338-201ENST00000636369 67 ntBASIC4.69□□□□□ -1.66
CD44P16070 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.69□□□□□ -1.66
CD44P16070 AL442644.1-201ENST00000454390 3105 ntBASIC4.69□□□□□ -1.66
CD44P16070 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.69□□□□□ -1.66
CD44P16070 NEAT1-202ENST00000501122 22743 ntBASIC4.69□□□□□ -1.66
CD44P16070 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
CD44P16070 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD44P16070 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD44P16070 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CD44P16070 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CD44P16070 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD44P16070 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD44P16070 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
CD44P16070 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.68□□□□□ -1.66
CD44P16070 SNORD74.4-201ENST00000364129 80 ntBASIC4.68□□□□□ -1.66
CD44P16070 RNU6-811P-201ENST00000384069 107 ntBASIC4.68□□□□□ -1.66
CD44P16070 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms