Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 FCF1P10-201ENST00000407590 479 ntBASIC-1.81□□□□□ -2.7
VCANP13611 RNU6-475P-201ENST00000516073 104 ntBASIC-1.81□□□□□ -2.7
VCANP13611 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-1.81□□□□□ -2.7
VCANP13611 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-1.81□□□□□ -2.7
VCANP13611 AC079610.2-201ENST00000604818 690 ntBASIC-1.81□□□□□ -2.7
VCANP13611 RNU6-164P-201ENST00000364604 103 ntBASIC-1.81□□□□□ -2.7
VCANP13611 AC243428.1-201ENST00000421099 264 ntBASIC-1.81□□□□□ -2.7
VCANP13611 snoU13.2-201ENST00000459201 104 ntBASIC-1.81□□□□□ -2.7
VCANP13611 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-1.81□□□□□ -2.7
VCANP13611 AC093249.1-201ENST00000567049 203 ntBASIC-1.81□□□□□ -2.7
VCANP13611 RNU6-1304P-201ENST00000411374 106 ntBASIC-1.82□□□□□ -2.7
VCANP13611 AC023512.1-201ENST00000444513 499 ntBASIC-1.82□□□□□ -2.7
VCANP13611 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-1.82□□□□□ -2.7
VCANP13611 SLC2A13P1-201ENST00000531560 322 ntBASIC-1.82□□□□□ -2.7
VCANP13611 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.82□□□□□ -2.7
VCANP13611 AL161729.4-201ENST00000604650 476 ntBASIC-1.82□□□□□ -2.7
VCANP13611 MTCYBP15-201ENST00000433123 1127 ntBASIC-1.82□□□□□ -2.7
VCANP13611 RNU7-94P-201ENST00000459576 63 ntBASIC-1.82□□□□□ -2.7
VCANP13611 RNU6-448P-201ENST00000517052 107 ntBASIC-1.82□□□□□ -2.7
VCANP13611 AC010525.2-201ENST00000590920 195 ntBASIC-1.82□□□□□ -2.7
VCANP13611 AL445435.1-201ENST00000604232 665 ntBASIC-1.82□□□□□ -2.7
VCANP13611 MTCO3P40-201ENST00000392516 676 ntBASIC-1.82□□□□□ -2.7
VCANP13611 AL589994.1-201ENST00000404962 340 ntBASIC-1.82□□□□□ -2.7
VCANP13611 TRIM60P5Y-201ENST00000413946 574 ntBASIC-1.82□□□□□ -2.7
VCANP13611 AL050341.1-201ENST00000447743 313 ntBASIC-1.82□□□□□ -2.7
VCANP13611 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.82□□□□□ -2.7
VCANP13611 AC087894.1-201ENST00000538359 518 ntBASIC-1.82□□□□□ -2.7
VCANP13611 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-1.82□□□□□ -2.7
VCANP13611 RNU6-862P-201ENST00000362804 105 ntBASIC-1.83□□□□□ -2.7
VCANP13611 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.83□□□□□ -2.7
VCANP13611 AC133104.2-201ENST00000615272 193 ntBASIC-1.83□□□□□ -2.7
VCANP13611 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.83□□□□□ -2.7
VCANP13611 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.83□□□□□ -2.7
VCANP13611 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.83□□□□□ -2.7
VCANP13611 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-1.83□□□□□ -2.7
VCANP13611 MT-TC-201ENST00000387405 66 ntBASIC-1.84□□□□□ -2.7
VCANP13611 CDK8P2-201ENST00000415020 547 ntBASIC-1.84□□□□□ -2.7
VCANP13611 YWHAZP8-201ENST00000436935 731 ntBASIC-1.84□□□□□ -2.7
VCANP13611 LRRC6P1-201ENST00000532188 885 ntBASIC-1.84□□□□□ -2.7
VCANP13611 AL353997.4-201ENST00000586196 166 ntBASIC-1.84□□□□□ -2.7
VCANP13611 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.84□□□□□ -2.7
VCANP13611 AC018714.1-201ENST00000605028 208 ntBASIC-1.84□□□□□ -2.7
VCANP13611 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.84□□□□□ -2.7
VCANP13611 RNU6-712P-201ENST00000410558 100 ntBASIC-1.84□□□□□ -2.7
VCANP13611 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-1.84□□□□□ -2.7
VCANP13611 RNU4-24P-201ENST00000364565 139 ntBASIC-1.85□□□□□ -2.71
VCANP13611 RNU6-900P-201ENST00000384498 102 ntBASIC-1.85□□□□□ -2.71
VCANP13611 MIR802-201ENST00000390235 94 ntBASIC-1.85□□□□□ -2.71
VCANP13611 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-1.85□□□□□ -2.71
VCANP13611 AL512286.1-201ENST00000439244 400 ntBASIC-1.85□□□□□ -2.71
VCANP13611 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.85□□□□□ -2.71
VCANP13611 MIR215-201ENST00000384858 110 ntBASIC-1.85□□□□□ -2.71
VCANP13611 MIR516B1-201ENST00000385211 90 ntBASIC-1.85□□□□□ -2.71
VCANP13611 MTND1P32-201ENST00000433043 938 ntBASIC-1.85□□□□□ -2.71
VCANP13611 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-1.85□□□□□ -2.71
VCANP13611 RNU6-944P-201ENST00000364023 107 ntBASIC-1.85□□□□□ -2.71
VCANP13611 AP000676.1-201ENST00000533307 52 ntBASIC-1.85□□□□□ -2.71
VCANP13611 AC018448.1-201ENST00000552843 316 ntBASIC-1.85□□□□□ -2.71
VCANP13611 MIR5693-201ENST00000577722 73 ntBASIC-1.85□□□□□ -2.71
VCANP13611 AC007684.1-201ENST00000609671 477 ntBASIC-1.85□□□□□ -2.71
VCANP13611 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-1.85□□□□□ -2.71
VCANP13611 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.86□□□□□ -2.71
VCANP13611 MIR888-201ENST00000401186 77 ntBASIC-1.86□□□□□ -2.71
VCANP13611 MTCO2P7-201ENST00000446518 666 ntBASIC-1.86□□□□□ -2.71
VCANP13611 RPS29P24-201ENST00000486345 171 ntBASIC-1.86□□□□□ -2.71
VCANP13611 AC079598.5-201ENST00000547460 117 ntBASIC-1.86□□□□□ -2.71
VCANP13611 AC022893.3-201ENST00000607665 437 ntBASIC-1.86□□□□□ -2.71
VCANP13611 AL118556.2-201ENST00000614375 824 ntBASIC-1.86□□□□□ -2.71
VCANP13611 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.87□□□□□ -2.71
VCANP13611 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.87□□□□□ -2.71
VCANP13611 AC009269.6-201ENST00000621778 588 ntBASIC-1.87□□□□□ -2.71
VCANP13611 AC091304.10-201ENST00000641554 121 ntBASIC-1.87□□□□□ -2.71
VCANP13611 ELOCP20-201ENST00000422460 345 ntBASIC-1.87□□□□□ -2.71
VCANP13611 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-1.87□□□□□ -2.71
VCANP13611 RNU6-714P-201ENST00000516963 103 ntBASIC-1.87□□□□□ -2.71
VCANP13611 SUMO2P18-201ENST00000518873 252 ntBASIC-1.87□□□□□ -2.71
VCANP13611 AC092470.1-201ENST00000546187 132 ntBASIC-1.87□□□□□ -2.71
VCANP13611 SNORD115-40-201ENST00000606510 82 ntBASIC-1.87□□□□□ -2.71
VCANP13611 AC006213.4-201ENST00000616184 634 ntBASIC-1.87□□□□□ -2.71
VCANP13611 AC046134.1-201ENST00000514454 666 ntBASIC-1.87□□□□□ -2.71
VCANP13611 MIR4742-201ENST00000581069 85 ntBASIC-1.87□□□□□ -2.71
VCANP13611 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.88□□□□□ -2.71
VCANP13611 RNA5SP20-201ENST00000515976 84 ntBASIC-1.88□□□□□ -2.71
VCANP13611 RNU5B-3P-201ENST00000516601 115 ntBASIC-1.88□□□□□ -2.71
VCANP13611 RNU6-63P-201ENST00000516690 95 ntBASIC-1.88□□□□□ -2.71
VCANP13611 AL596327.1-201ENST00000603629 213 ntBASIC-1.88□□□□□ -2.71
VCANP13611 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.88□□□□□ -2.71
VCANP13611 TMEM251P1-201ENST00000503717 318 ntBASIC-1.88□□□□□ -2.71
VCANP13611 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-1.88□□□□□ -2.71
VCANP13611 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.88□□□□□ -2.71
VCANP13611 AC010205.1-201ENST00000616668 449 ntBASIC-1.88□□□□□ -2.71
VCANP13611 RNU6-199P-201ENST00000362954 107 ntBASIC-1.89□□□□□ -2.71
VCANP13611 MIR660-201ENST00000385235 97 ntBASIC-1.89□□□□□ -2.71
VCANP13611 MIR320B1-201ENST00000390209 79 ntBASIC-1.89□□□□□ -2.71
VCANP13611 AC004217.3-201ENST00000551552 878 ntBASIC-1.89□□□□□ -2.71
VCANP13611 AC104260.1-201ENST00000616660 539 ntBASIC-1.89□□□□□ -2.71
VCANP13611 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.89□□□□□ -2.71
VCANP13611 Y_RNA.168-201ENST00000363740 102 ntBASIC-1.89□□□□□ -2.71
VCANP13611 AC007000.2-201ENST00000442564 487 ntBASIC-1.89□□□□□ -2.71
VCANP13611 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.89□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms