Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 AC107083.1-201ENST00000439643 279 ntBASIC2.37□□□□□ -2.03
PF4V1P10720 HMGN1P10-201ENST00000474557 553 ntBASIC2.37□□□□□ -2.03
PF4V1P10720 RPS29P21-201ENST00000496272 170 ntBASIC2.37□□□□□ -2.03
PF4V1P10720 SCGB1D5P-201ENST00000515134 247 ntBASIC2.37□□□□□ -2.03
PF4V1P10720 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.37□□□□□ -2.03
PF4V1P10720 RPL21P9-201ENST00000556149 474 ntBASIC2.37□□□□□ -2.03
PF4V1P10720 U6.108-201ENST00000637764 58 ntBASIC2.37□□□□□ -2.03
PF4V1P10720 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PF4V1P10720 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
PF4V1P10720 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
PF4V1P10720 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PF4V1P10720 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
PF4V1P10720 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PF4V1P10720 RNU6-117P-201ENST00000365415 107 ntBASIC2.36□□□□□ -2.03
PF4V1P10720 Y_RNA.418-201ENST00000384029 102 ntBASIC2.36□□□□□ -2.03
PF4V1P10720 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.36□□□□□ -2.03
PF4V1P10720 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.36□□□□□ -2.03
PF4V1P10720 AC245047.4-201ENST00000433189 144 ntBASIC2.36□□□□□ -2.03
PF4V1P10720 RNU7-94P-201ENST00000459576 63 ntBASIC2.36□□□□□ -2.03
PF4V1P10720 RNU6-1338P-201ENST00000516328 91 ntBASIC2.36□□□□□ -2.03
PF4V1P10720 RNU6-1337P-201ENST00000516525 95 ntBASIC2.36□□□□□ -2.03
PF4V1P10720 AC084364.2-201ENST00000546924 395 ntBASIC2.36□□□□□ -2.03
PF4V1P10720 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.36□□□□□ -2.03
PF4V1P10720 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.36□□□□□ -2.03
PF4V1P10720 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
PF4V1P10720 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PF4V1P10720 RNU6-514P-201ENST00000384208 107 ntBASIC2.35□□□□□ -2.03
PF4V1P10720 MIR568-201ENST00000385036 95 ntBASIC2.35□□□□□ -2.03
PF4V1P10720 OOSP1P1-201ENST00000423265 274 ntBASIC2.35□□□□□ -2.03
PF4V1P10720 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.35□□□□□ -2.03
PF4V1P10720 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.35□□□□□ -2.03
PF4V1P10720 MIR3145-201ENST00000580727 82 ntBASIC2.35□□□□□ -2.03
PF4V1P10720 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.35□□□□□ -2.03
PF4V1P10720 MIR6895-201ENST00000613497 78 ntBASIC2.35□□□□□ -2.03
PF4V1P10720 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.35□□□□□ -2.03
PF4V1P10720 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PF4V1P10720 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PF4V1P10720 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
PF4V1P10720 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.35□□□□□ -2.03
PF4V1P10720 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PF4V1P10720 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PF4V1P10720 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
PF4V1P10720 AL356292.1-201ENST00000283110 373 ntBASIC2.34□□□□□ -2.03
PF4V1P10720 SNORA25.1-201ENST00000362326 128 ntBASIC2.34□□□□□ -2.03
PF4V1P10720 RNU4-80P-201ENST00000363200 141 ntBASIC2.34□□□□□ -2.03
PF4V1P10720 Y_RNA.368-201ENST00000365547 113 ntBASIC2.34□□□□□ -2.03
PF4V1P10720 Y_RNA.456-201ENST00000384232 111 ntBASIC2.34□□□□□ -2.03
PF4V1P10720 RNU6-196P-201ENST00000384315 107 ntBASIC2.34□□□□□ -2.03
PF4V1P10720 Y_RNA.518-201ENST00000384552 113 ntBASIC2.34□□□□□ -2.03
PF4V1P10720 RNU6-376P-201ENST00000384731 106 ntBASIC2.34□□□□□ -2.03
PF4V1P10720 MIR520A-201ENST00000384862 85 ntBASIC2.34□□□□□ -2.03
PF4V1P10720 RNA5SP212-201ENST00000391223 107 ntBASIC2.34□□□□□ -2.03
PF4V1P10720 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.34□□□□□ -2.03
PF4V1P10720 RNU6-855P-201ENST00000410395 104 ntBASIC2.34□□□□□ -2.03
PF4V1P10720 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.34□□□□□ -2.03
PF4V1P10720 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.34□□□□□ -2.03
PF4V1P10720 RN7SL633P-201ENST00000488974 297 ntBASIC2.34□□□□□ -2.03
PF4V1P10720 RPL36AP21-201ENST00000490372 323 ntBASIC2.34□□□□□ -2.03
PF4V1P10720 AL163195.1-201ENST00000496941 348 ntBASIC2.34□□□□□ -2.03
PF4V1P10720 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.34□□□□□ -2.03
PF4V1P10720 MIR4287-201ENST00000579398 78 ntBASIC2.34□□□□□ -2.03
PF4V1P10720 AC073413.2-201ENST00000604332 360 ntBASIC2.34□□□□□ -2.03
PF4V1P10720 AP001282.2-201ENST00000616149 309 ntBASIC2.34□□□□□ -2.03
PF4V1P10720 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.33□□□□□ -2.04
PF4V1P10720 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PF4V1P10720 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PF4V1P10720 MIR335-201ENST00000362173 94 ntBASIC2.33□□□□□ -2.04
PF4V1P10720 RNA5SP276-201ENST00000362580 94 ntBASIC2.33□□□□□ -2.04
PF4V1P10720 Y_RNA.144-201ENST00000363521 113 ntBASIC2.33□□□□□ -2.04
PF4V1P10720 RNU6-112P-201ENST00000363599 104 ntBASIC2.33□□□□□ -2.04
PF4V1P10720 SNORA63D-201ENST00000364359 132 ntBASIC2.33□□□□□ -2.04
PF4V1P10720 SNORA54-201ENST00000384281 123 ntBASIC2.33□□□□□ -2.04
PF4V1P10720 RNU6-472P-201ENST00000384299 107 ntBASIC2.33□□□□□ -2.04
PF4V1P10720 MT-TW-201ENST00000387382 68 ntBASIC2.33□□□□□ -2.04
PF4V1P10720 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.33□□□□□ -2.04
PF4V1P10720 RNA5SP100-201ENST00000410903 110 ntBASIC2.33□□□□□ -2.04
PF4V1P10720 RNA5SP59-201ENST00000410922 110 ntBASIC2.33□□□□□ -2.04
PF4V1P10720 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.33□□□□□ -2.04
PF4V1P10720 MTCO1P5-201ENST00000433573 344 ntBASIC2.33□□□□□ -2.04
PF4V1P10720 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.33□□□□□ -2.04
PF4V1P10720 UQCRHP3-201ENST00000451503 251 ntBASIC2.33□□□□□ -2.04
PF4V1P10720 RPL23AP94-201ENST00000512518 302 ntBASIC2.33□□□□□ -2.04
PF4V1P10720 SERF1AP1-201ENST00000514575 187 ntBASIC2.33□□□□□ -2.04
PF4V1P10720 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.33□□□□□ -2.04
PF4V1P10720 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.33□□□□□ -2.04
PF4V1P10720 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.33□□□□□ -2.04
PF4V1P10720 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.33□□□□□ -2.04
PF4V1P10720 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PF4V1P10720 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PF4V1P10720 AC018630.2-201ENST00000534866 2403 ntBASIC2.32□□□□□ -2.04
PF4V1P10720 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
PF4V1P10720 AC131280.1-202ENST00000624067 4211 ntBASIC2.32□□□□□ -2.04
PF4V1P10720 Y_RNA.16-201ENST00000362421 102 ntBASIC2.32□□□□□ -2.04
PF4V1P10720 Y_RNA.341-201ENST00000365341 102 ntBASIC2.32□□□□□ -2.04
PF4V1P10720 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.32□□□□□ -2.04
PF4V1P10720 RNU6-463P-201ENST00000384340 107 ntBASIC2.32□□□□□ -2.04
PF4V1P10720 Y_RNA.483-201ENST00000384380 101 ntBASIC2.32□□□□□ -2.04
PF4V1P10720 RNU6-851P-201ENST00000384565 107 ntBASIC2.32□□□□□ -2.04
PF4V1P10720 SNORA46-201ENST00000384762 135 ntBASIC2.32□□□□□ -2.04
PF4V1P10720 MIR181A2-201ENST00000384863 110 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms