Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 Y_RNA.686-201ENST00000516548 134 ntBASIC3.39□□□□□ -1.87
PDGFAP04085 RNU6-1096P-201ENST00000517089 102 ntBASIC3.39□□□□□ -1.87
PDGFAP04085 MIR3616-201ENST00000584070 92 ntBASIC3.39□□□□□ -1.87
PDGFAP04085 JPX_2.1-201ENST00000614161 69 ntBASIC3.39□□□□□ -1.87
PDGFAP04085 SNORA50A-202ENST00000629536 136 ntBASIC3.39□□□□□ -1.87
PDGFAP04085 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PDGFAP04085 AC110774.1-201ENST00000623567 2018 ntBASIC3.39□□□□□ -1.87
PDGFAP04085 AL355596.1-201ENST00000565399 3996 ntBASIC3.39□□□□□ -1.87
PDGFAP04085 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PDGFAP04085 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.38□□□□□ -1.87
PDGFAP04085 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.38□□□□□ -1.87
PDGFAP04085 RNU6-1209P-201ENST00000363655 107 ntBASIC3.38□□□□□ -1.87
PDGFAP04085 RNU1-33P-201ENST00000364249 162 ntBASIC3.38□□□□□ -1.87
PDGFAP04085 Y_RNA.796-201ENST00000364268 102 ntBASIC3.38□□□□□ -1.87
PDGFAP04085 Y_RNA.799-201ENST00000364992 102 ntBASIC3.38□□□□□ -1.87
PDGFAP04085 RNA5SP120-201ENST00000410900 112 ntBASIC3.38□□□□□ -1.87
PDGFAP04085 AC244505.4-201ENST00000434905 287 ntBASIC3.38□□□□□ -1.87
PDGFAP04085 SSXP5-201ENST00000443473 287 ntBASIC3.38□□□□□ -1.87
PDGFAP04085 EEF1B2P7-201ENST00000451177 676 ntBASIC3.38□□□□□ -1.87
PDGFAP04085 RN7SKP179-201ENST00000516126 217 ntBASIC3.38□□□□□ -1.87
PDGFAP04085 RN7SKP83-201ENST00000516512 178 ntBASIC3.38□□□□□ -1.87
PDGFAP04085 RNU6-667P-201ENST00000517186 102 ntBASIC3.38□□□□□ -1.87
PDGFAP04085 NDUFA5P6-201ENST00000542110 379 ntBASIC3.38□□□□□ -1.87
PDGFAP04085 Y_RNA.757-201ENST00000578934 114 ntBASIC3.38□□□□□ -1.87
PDGFAP04085 MIR4662B-201ENST00000579498 81 ntBASIC3.38□□□□□ -1.87
PDGFAP04085 AC007229.1-201ENST00000590455 412 ntBASIC3.38□□□□□ -1.87
PDGFAP04085 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
PDGFAP04085 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PDGFAP04085 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
PDGFAP04085 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.37□□□□□ -1.87
PDGFAP04085 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PDGFAP04085 AC138915.1-201ENST00000565427 1685 ntBASIC3.37□□□□□ -1.87
PDGFAP04085 MIR340-201ENST00000362125 95 ntBASIC3.37□□□□□ -1.87
PDGFAP04085 snoU2-30.2-201ENST00000362805 70 ntBASIC3.37□□□□□ -1.87
PDGFAP04085 SNORD20-201ENST00000384550 80 ntBASIC3.37□□□□□ -1.87
PDGFAP04085 RNU6-220P-201ENST00000390919 107 ntBASIC3.37□□□□□ -1.87
PDGFAP04085 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.37□□□□□ -1.87
PDGFAP04085 RNU6-1186P-201ENST00000410429 97 ntBASIC3.37□□□□□ -1.87
PDGFAP04085 CYCSP49-201ENST00000420810 319 ntBASIC3.37□□□□□ -1.87
PDGFAP04085 AC005326.1-201ENST00000429197 123 ntBASIC3.37□□□□□ -1.87
PDGFAP04085 RPL21P10-201ENST00000463521 490 ntBASIC3.37□□□□□ -1.87
PDGFAP04085 AC011406.1-201ENST00000512440 370 ntBASIC3.37□□□□□ -1.87
PDGFAP04085 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.37□□□□□ -1.87
PDGFAP04085 MIR4738-201ENST00000579134 87 ntBASIC3.37□□□□□ -1.87
PDGFAP04085 MIR4298-201ENST00000584380 73 ntBASIC3.37□□□□□ -1.87
PDGFAP04085 AC073413.2-201ENST00000604332 360 ntBASIC3.37□□□□□ -1.87
PDGFAP04085 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
PDGFAP04085 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDGFAP04085 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDGFAP04085 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PDGFAP04085 RNY1P11-201ENST00000363759 113 ntBASIC3.36□□□□□ -1.87
PDGFAP04085 RNU1-96P-201ENST00000364163 162 ntBASIC3.36□□□□□ -1.87
PDGFAP04085 Y_RNA.634-201ENST00000364811 113 ntBASIC3.36□□□□□ -1.87
PDGFAP04085 MIR562-201ENST00000384894 95 ntBASIC3.36□□□□□ -1.87
PDGFAP04085 MIR1289-1-201ENST00000408836 144 ntBASIC3.36□□□□□ -1.87
PDGFAP04085 Y_RNA.621-201ENST00000411065 96 ntBASIC3.36□□□□□ -1.87
PDGFAP04085 AC003685.2-201ENST00000422795 395 ntBASIC3.36□□□□□ -1.87
PDGFAP04085 AL357552.1-201ENST00000445254 415 ntBASIC3.36□□□□□ -1.87
PDGFAP04085 AC025518.1-201ENST00000479856 347 ntBASIC3.36□□□□□ -1.87
PDGFAP04085 OR9P1P-201ENST00000496431 281 ntBASIC3.36□□□□□ -1.87
PDGFAP04085 RNU6-659P-201ENST00000516454 104 ntBASIC3.36□□□□□ -1.87
PDGFAP04085 AC097639.2-201ENST00000603159 172 ntBASIC3.36□□□□□ -1.87
PDGFAP04085 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.36□□□□□ -1.87
PDGFAP04085 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PDGFAP04085 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PDGFAP04085 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PDGFAP04085 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.35□□□□□ -1.87
PDGFAP04085 RNU6-834P-201ENST00000362367 110 ntBASIC3.35□□□□□ -1.87
PDGFAP04085 RNU6-215P-201ENST00000365169 102 ntBASIC3.35□□□□□ -1.87
PDGFAP04085 RNU6-1138P-201ENST00000365359 106 ntBASIC3.35□□□□□ -1.87
PDGFAP04085 MIR592-201ENST00000384959 97 ntBASIC3.35□□□□□ -1.87
PDGFAP04085 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PDGFAP04085 RNU7-99P-201ENST00000516271 62 ntBASIC3.35□□□□□ -1.87
PDGFAP04085 NDUFB9P3-201ENST00000521269 501 ntBASIC3.35□□□□□ -1.87
PDGFAP04085 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.35□□□□□ -1.87
PDGFAP04085 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.35□□□□□ -1.87
PDGFAP04085 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.35□□□□□ -1.87
PDGFAP04085 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.35□□□□□ -1.87
PDGFAP04085 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDGFAP04085 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.34□□□□□ -1.87
PDGFAP04085 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.34□□□□□ -1.87
PDGFAP04085 SRIP3-201ENST00000413200 219 ntBASIC3.34□□□□□ -1.87
PDGFAP04085 AL513477.1-202ENST00000417061 214 ntBASIC3.34□□□□□ -1.87
PDGFAP04085 AL353689.1-201ENST00000438895 199 ntBASIC3.34□□□□□ -1.87
PDGFAP04085 AL049873.1-201ENST00000480540 376 ntBASIC3.34□□□□□ -1.87
PDGFAP04085 RNU2-27P-201ENST00000516185 142 ntBASIC3.34□□□□□ -1.87
PDGFAP04085 RNU7-149P-201ENST00000516739 59 ntBASIC3.34□□□□□ -1.87
PDGFAP04085 AC090049.2-201ENST00000550377 109 ntBASIC3.34□□□□□ -1.87
PDGFAP04085 Pinc.1-201ENST00000616452 154 ntBASIC3.34□□□□□ -1.87
PDGFAP04085 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
PDGFAP04085 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PDGFAP04085 RNU4-35P-201ENST00000362588 141 ntBASIC3.33□□□□□ -1.88
PDGFAP04085 Y_RNA.91-201ENST00000363042 107 ntBASIC3.33□□□□□ -1.88
PDGFAP04085 RNU6-461P-201ENST00000364195 107 ntBASIC3.33□□□□□ -1.88
PDGFAP04085 RNU6-1336P-201ENST00000383886 109 ntBASIC3.33□□□□□ -1.88
PDGFAP04085 RNA5SP424-201ENST00000390988 115 ntBASIC3.33□□□□□ -1.88
PDGFAP04085 Y_RNA.692-201ENST00000516627 105 ntBASIC3.33□□□□□ -1.88
PDGFAP04085 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.33□□□□□ -1.88
PDGFAP04085 YPEL5P2-201ENST00000605553 359 ntBASIC3.33□□□□□ -1.88
PDGFAP04085 AL359075.3-201ENST00000613288 217 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms