Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC005034.5-201ENST00000604219 466 ntBASIC1.78□□□□□ -2.12
VTNP04004 AL645939.4-201ENST00000604495 135 ntBASIC1.78□□□□□ -2.12
VTNP04004 AC006001.4-201ENST00000622243 395 ntBASIC1.78□□□□□ -2.12
VTNP04004 AL159152.1-201ENST00000635019 2587 ntBASIC1.78□□□□□ -2.12
VTNP04004 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.77□□□□□ -2.13
VTNP04004 MIR340-201ENST00000362125 95 ntBASIC1.77□□□□□ -2.13
VTNP04004 SNORA22B-201ENST00000383876 138 ntBASIC1.77□□□□□ -2.13
VTNP04004 RN7SKP101-201ENST00000411376 320 ntBASIC1.77□□□□□ -2.13
VTNP04004 AL158823.1-201ENST00000418441 478 ntBASIC1.77□□□□□ -2.13
VTNP04004 AC005534.2-201ENST00000431047 433 ntBASIC1.77□□□□□ -2.13
VTNP04004 MTCO1P44-201ENST00000441935 243 ntBASIC1.77□□□□□ -2.13
VTNP04004 RNU6-625P-201ENST00000459412 107 ntBASIC1.77□□□□□ -2.13
VTNP04004 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.77□□□□□ -2.13
VTNP04004 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.77□□□□□ -2.13
VTNP04004 AC108729.3-201ENST00000513484 108 ntBASIC1.77□□□□□ -2.13
VTNP04004 SNORA40.9-201ENST00000515895 93 ntBASIC1.77□□□□□ -2.13
VTNP04004 AK6P2-201ENST00000549020 471 ntBASIC1.77□□□□□ -2.13
VTNP04004 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.77□□□□□ -2.13
VTNP04004 AC005592.1-201ENST00000566527 1640 ntBASIC1.77□□□□□ -2.13
VTNP04004 CENPCP1-201ENST00000533085 2578 ntBASIC1.76□□□□□ -2.13
VTNP04004 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
VTNP04004 Y_RNA.148-201ENST00000363557 117 ntBASIC1.76□□□□□ -2.13
VTNP04004 U3.8-201ENST00000363675 217 ntBASIC1.76□□□□□ -2.13
VTNP04004 RNU1-42P-201ENST00000364033 160 ntBASIC1.76□□□□□ -2.13
VTNP04004 MIR1302-11-201ENST00000408051 138 ntBASIC1.76□□□□□ -2.13
VTNP04004 MIR1302-9-201ENST00000408365 138 ntBASIC1.76□□□□□ -2.13
VTNP04004 MIR1302-10-201ENST00000408734 138 ntBASIC1.76□□□□□ -2.13
VTNP04004 RNA5SP475-201ENST00000410568 110 ntBASIC1.76□□□□□ -2.13
VTNP04004 RNU2-40P-201ENST00000410833 196 ntBASIC1.76□□□□□ -2.13
VTNP04004 AP1B1P2-201ENST00000416196 106 ntBASIC1.76□□□□□ -2.13
VTNP04004 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.76□□□□□ -2.13
VTNP04004 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.76□□□□□ -2.13
VTNP04004 AC010469.2-201ENST00000496412 480 ntBASIC1.76□□□□□ -2.13
VTNP04004 RNU6-1041P-201ENST00000516254 102 ntBASIC1.76□□□□□ -2.13
VTNP04004 CYCSP23-201ENST00000519781 313 ntBASIC1.76□□□□□ -2.13
VTNP04004 AC018448.1-201ENST00000552843 316 ntBASIC1.76□□□□□ -2.13
VTNP04004 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.76□□□□□ -2.13
VTNP04004 AC020661.2-201ENST00000560114 134 ntBASIC1.76□□□□□ -2.13
VTNP04004 AC024614.2-201ENST00000577584 372 ntBASIC1.76□□□□□ -2.13
VTNP04004 SNORD53B-201ENST00000577887 78 ntBASIC1.76□□□□□ -2.13
VTNP04004 MIR4659A-201ENST00000580269 81 ntBASIC1.76□□□□□ -2.13
VTNP04004 MIR1302-2-201ENST00000607096 138 ntBASIC1.76□□□□□ -2.13
VTNP04004 AL627230.6-201ENST00000611129 280 ntBASIC1.76□□□□□ -2.13
VTNP04004 AL138825.1-201ENST00000618587 192 ntBASIC1.76□□□□□ -2.13
VTNP04004 snoZ196.1-201ENST00000625269 89 ntBASIC1.76□□□□□ -2.13
VTNP04004 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
VTNP04004 Y_RNA.27-201ENST00000362540 103 ntBASIC1.75□□□□□ -2.13
VTNP04004 Y_RNA.202-201ENST00000364083 110 ntBASIC1.75□□□□□ -2.13
VTNP04004 SNORD14.1-201ENST00000365609 90 ntBASIC1.75□□□□□ -2.13
VTNP04004 RNY3P4-201ENST00000384428 101 ntBASIC1.75□□□□□ -2.13
VTNP04004 SNORD78.2-201ENST00000391076 69 ntBASIC1.75□□□□□ -2.13
VTNP04004 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VTNP04004 MIR1323-201ENST00000408090 73 ntBASIC1.75□□□□□ -2.13
VTNP04004 ELOCP21-201ENST00000412558 336 ntBASIC1.75□□□□□ -2.13
VTNP04004 RPL23AP6-201ENST00000446637 472 ntBASIC1.75□□□□□ -2.13
VTNP04004 AC067942.3-201ENST00000512025 362 ntBASIC1.75□□□□□ -2.13
VTNP04004 RNU6-911P-201ENST00000516523 104 ntBASIC1.75□□□□□ -2.13
VTNP04004 Y_RNA.711-201ENST00000516993 102 ntBASIC1.75□□□□□ -2.13
VTNP04004 AC027419.1-201ENST00000522976 328 ntBASIC1.75□□□□□ -2.13
VTNP04004 AC087441.2-201ENST00000529141 262 ntBASIC1.75□□□□□ -2.13
VTNP04004 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.75□□□□□ -2.13
VTNP04004 MIR3169-201ENST00000578032 83 ntBASIC1.75□□□□□ -2.13
VTNP04004 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.75□□□□□ -2.13
VTNP04004 AC008749.1-201ENST00000597650 306 ntBASIC1.75□□□□□ -2.13
VTNP04004 AC016925.2-201ENST00000605108 242 ntBASIC1.75□□□□□ -2.13
VTNP04004 snoU13.31-201ENST00000607291 104 ntBASIC1.75□□□□□ -2.13
VTNP04004 AL773524.1-201ENST00000614065 229 ntBASIC1.75□□□□□ -2.13
VTNP04004 U1.36-201ENST00000620684 176 ntBASIC1.75□□□□□ -2.13
VTNP04004 AC008873.1-201ENST00000625051 138 ntBASIC1.75□□□□□ -2.13
VTNP04004 U6.92-201ENST00000636464 89 ntBASIC1.75□□□□□ -2.13
VTNP04004 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.75□□□□□ -2.13
VTNP04004 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
VTNP04004 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
VTNP04004 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VTNP04004 RNU4-76P-201ENST00000364509 141 ntBASIC1.74□□□□□ -2.13
VTNP04004 RNU6-450P-201ENST00000364654 107 ntBASIC1.74□□□□□ -2.13
VTNP04004 RNU6-60P-201ENST00000364792 103 ntBASIC1.74□□□□□ -2.13
VTNP04004 Y_RNA.389-201ENST00000383924 113 ntBASIC1.74□□□□□ -2.13
VTNP04004 RNU6-1011P-201ENST00000384668 107 ntBASIC1.74□□□□□ -2.13
VTNP04004 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
VTNP04004 MIR1253-201ENST00000408273 105 ntBASIC1.74□□□□□ -2.13
VTNP04004 AC060773.1-201ENST00000421698 310 ntBASIC1.74□□□□□ -2.13
VTNP04004 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.74□□□□□ -2.13
VTNP04004 AL357134.1-201ENST00000445848 426 ntBASIC1.74□□□□□ -2.13
VTNP04004 FCF1P4-201ENST00000448326 183 ntBASIC1.74□□□□□ -2.13
VTNP04004 MRPS17P9-201ENST00000511924 393 ntBASIC1.74□□□□□ -2.13
VTNP04004 SNORA40.14-201ENST00000516543 86 ntBASIC1.74□□□□□ -2.13
VTNP04004 MIR514B-201ENST00000516774 80 ntBASIC1.74□□□□□ -2.13
VTNP04004 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VTNP04004 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.74□□□□□ -2.13
VTNP04004 AC040926.1-201ENST00000530195 238 ntBASIC1.74□□□□□ -2.13
VTNP04004 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.74□□□□□ -2.13
VTNP04004 MIR4299-201ENST00000577899 72 ntBASIC1.74□□□□□ -2.13
VTNP04004 AC124312.5-201ENST00000604451 268 ntBASIC1.74□□□□□ -2.13
VTNP04004 AC012493.3-201ENST00000604494 112 ntBASIC1.74□□□□□ -2.13
VTNP04004 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.74□□□□□ -2.13
VTNP04004 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.74□□□□□ -2.13
VTNP04004 AC240442.1-201ENST00000616055 283 ntBASIC1.74□□□□□ -2.13
VTNP04004 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.74□□□□□ -2.13
VTNP04004 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms