Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 Y_RNA.28-201ENST00000362554 111 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 Y_RNA.39-201ENST00000362620 98 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 RNU6-694P-201ENST00000364071 147 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 SNORA70B-201ENST00000384210 135 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 AL117342.1-201ENST00000404861 406 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 MIR548P-201ENST00000408336 84 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 MTND1P14-201ENST00000427400 950 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 UQCRBP2-201ENST00000447827 297 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 HMGN2P23-201ENST00000456759 269 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 RNU6-221P-201ENST00000459541 99 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 TRBV12-1-201ENST00000479785 344 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 RNU6-408P-201ENST00000515910 100 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 RNU6-107P-201ENST00000516643 102 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 Y_RNA.711-201ENST00000516993 102 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 AC025647.1-201ENST00000517879 253 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 SUB1P4-201ENST00000566062 339 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 MIR4285-201ENST00000581001 85 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 AC083806.3-201ENST00000614016 455 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 U6.92-201ENST00000636464 89 ntBASIC1.57□□□□□ -2.16
MT-ND1P03886 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
MT-ND1P03886 Y_RNA.27-201ENST00000362540 103 ntBASIC1.56□□□□□ -2.16
MT-ND1P03886 RNU6-454P-201ENST00000364292 107 ntBASIC1.56□□□□□ -2.16
MT-ND1P03886 RNU4-76P-201ENST00000364509 141 ntBASIC1.56□□□□□ -2.16
MT-ND1P03886 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
MT-ND1P03886 AC114982.1-201ENST00000469402 321 ntBASIC1.56□□□□□ -2.16
MT-ND1P03886 AL163540.1-201ENST00000485382 386 ntBASIC1.56□□□□□ -2.16
MT-ND1P03886 RNU2-34P-201ENST00000516534 121 ntBASIC1.56□□□□□ -2.16
MT-ND1P03886 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
MT-ND1P03886 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.56□□□□□ -2.16
MT-ND1P03886 DEFB122-202ENST00000569013 197 ntBASIC1.56□□□□□ -2.16
MT-ND1P03886 MIR4659A-201ENST00000580269 81 ntBASIC1.56□□□□□ -2.16
MT-ND1P03886 AC104695.3-201ENST00000604052 296 ntBASIC1.56□□□□□ -2.16
MT-ND1P03886 AC006001.4-201ENST00000622243 395 ntBASIC1.56□□□□□ -2.16
MT-ND1P03886 AC245060.5-201ENST00000610778 3293 ntBASIC1.56□□□□□ -2.16
MT-ND1P03886 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 SNORD114-1-201ENST00000362705 72 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 RNU6-862P-201ENST00000362804 105 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 Y_RNA.498-201ENST00000384460 102 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 MIR583-201ENST00000384846 75 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 MIR628-201ENST00000385229 95 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 MIR1302-11-201ENST00000408051 138 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 MIR1302-9-201ENST00000408365 138 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 MIR1302-10-201ENST00000408734 138 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 RAB28P5-201ENST00000427490 651 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 AC010409.1-201ENST00000487382 476 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 AC011406.1-201ENST00000512440 370 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 AC074133.1-201ENST00000515696 183 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 SNORA40.14-201ENST00000516543 86 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 SNORA31.17-201ENST00000516953 127 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 SUMO2P18-201ENST00000518873 252 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 CYCSP23-201ENST00000519781 313 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
MT-ND1P03886 MIR1302-2-201ENST00000607096 138 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.55□□□□□ -2.16
MT-ND1P03886 MIR8074-201ENST00000615081 81 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 AC240442.1-201ENST00000616055 283 ntBASIC1.55□□□□□ -2.16
MT-ND1P03886 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.55□□□□□ -2.16
MT-ND1P03886 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.55□□□□□ -2.16
MT-ND1P03886 MIR424-201ENST00000362227 98 ntBASIC1.54□□□□□ -2.16
MT-ND1P03886 SNORA33-201ENST00000363664 130 ntBASIC1.54□□□□□ -2.16
MT-ND1P03886 Y_RNA.287-201ENST00000364853 94 ntBASIC1.54□□□□□ -2.16
MT-ND1P03886 RNU6-1264P-201ENST00000383891 107 ntBASIC1.54□□□□□ -2.16
MT-ND1P03886 RNU6-1227P-201ENST00000383981 107 ntBASIC1.54□□□□□ -2.16
MT-ND1P03886 Y_RNA.458-201ENST00000384240 102 ntBASIC1.54□□□□□ -2.16
MT-ND1P03886 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
MT-ND1P03886 SNORA40.18-201ENST00000391200 128 ntBASIC1.54□□□□□ -2.16
MT-ND1P03886 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.54□□□□□ -2.16
MT-ND1P03886 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
MT-ND1P03886 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.54□□□□□ -2.16
MT-ND1P03886 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.54□□□□□ -2.16
MT-ND1P03886 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.54□□□□□ -2.16
MT-ND1P03886 RNU6-625P-201ENST00000459412 107 ntBASIC1.54□□□□□ -2.16
MT-ND1P03886 UBL5P3-201ENST00000475112 231 ntBASIC1.54□□□□□ -2.16
MT-ND1P03886 RNU6-966P-201ENST00000516479 104 ntBASIC1.54□□□□□ -2.16
MT-ND1P03886 RNU6-1137P-201ENST00000517073 99 ntBASIC1.54□□□□□ -2.16
MT-ND1P03886 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.54□□□□□ -2.16
MT-ND1P03886 AC016925.2-201ENST00000605108 242 ntBASIC1.54□□□□□ -2.16
MT-ND1P03886 MIR8081-201ENST00000611533 95 ntBASIC1.54□□□□□ -2.16
MT-ND1P03886 AL021879.1-201ENST00000611756 288 ntBASIC1.54□□□□□ -2.16
MT-ND1P03886 PART1_1.1-201ENST00000611761 217 ntBASIC1.54□□□□□ -2.16
MT-ND1P03886 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.54□□□□□ -2.16
MT-ND1P03886 MIR338-201ENST00000636369 67 ntBASIC1.54□□□□□ -2.16
MT-ND1P03886 AC005592.1-201ENST00000566527 1640 ntBASIC1.54□□□□□ -2.16
MT-ND1P03886 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
MT-ND1P03886 MIR410-201ENST00000362222 80 ntBASIC1.53□□□□□ -2.16
MT-ND1P03886 MIR126-201ENST00000362291 85 ntBASIC1.53□□□□□ -2.16
MT-ND1P03886 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
MT-ND1P03886 SNORD78.2-201ENST00000391076 69 ntBASIC1.53□□□□□ -2.16
MT-ND1P03886 RNU6-130P-201ENST00000411112 103 ntBASIC1.53□□□□□ -2.16
MT-ND1P03886 MTCO3P19-201ENST00000415864 321 ntBASIC1.53□□□□□ -2.16
MT-ND1P03886 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.53□□□□□ -2.16
MT-ND1P03886 HMGN2P34-201ENST00000437647 269 ntBASIC1.53□□□□□ -2.16
MT-ND1P03886 ATP5J2P3-201ENST00000451550 258 ntBASIC1.53□□□□□ -2.16
MT-ND1P03886 SNORD65B-201ENST00000459126 73 ntBASIC1.53□□□□□ -2.16
MT-ND1P03886 AC025465.3-201ENST00000510570 311 ntBASIC1.53□□□□□ -2.16
MT-ND1P03886 SNORA25.10-201ENST00000515926 124 ntBASIC1.53□□□□□ -2.16
MT-ND1P03886 RNU1-41P-201ENST00000516161 162 ntBASIC1.53□□□□□ -2.16
MT-ND1P03886 RNU1-48P-201ENST00000516400 162 ntBASIC1.53□□□□□ -2.16
MT-ND1P03886 AC040926.1-201ENST00000530195 238 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms