Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC073476.4-201ENST00000628409 72 ntBASIC2.89□□□□□ -1.95
CNOT4O95628 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.89□□□□□ -1.95
CNOT4O95628 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.88□□□□□ -1.95
CNOT4O95628 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
CNOT4O95628 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.88□□□□□ -1.95
CNOT4O95628 RNA5SP383-201ENST00000362934 120 ntBASIC2.88□□□□□ -1.95
CNOT4O95628 RNU6-199P-201ENST00000362954 107 ntBASIC2.88□□□□□ -1.95
CNOT4O95628 RNU6-1072P-201ENST00000384703 107 ntBASIC2.88□□□□□ -1.95
CNOT4O95628 RNU6-443P-201ENST00000384780 107 ntBASIC2.88□□□□□ -1.95
CNOT4O95628 AC006461.1-201ENST00000412637 326 ntBASIC2.88□□□□□ -1.95
CNOT4O95628 SUMO1P4-201ENST00000429430 302 ntBASIC2.88□□□□□ -1.95
CNOT4O95628 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.88□□□□□ -1.95
CNOT4O95628 AL121914.1-201ENST00000450188 156 ntBASIC2.88□□□□□ -1.95
CNOT4O95628 AL137159.1-201ENST00000452808 512 ntBASIC2.88□□□□□ -1.95
CNOT4O95628 MIR4658-201ENST00000584344 65 ntBASIC2.88□□□□□ -1.95
CNOT4O95628 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.88□□□□□ -1.95
CNOT4O95628 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.88□□□□□ -1.95
CNOT4O95628 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.88□□□□□ -1.95
CNOT4O95628 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.88□□□□□ -1.95
CNOT4O95628 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CNOT4O95628 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CNOT4O95628 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CNOT4O95628 MIR367-201ENST00000362299 68 ntBASIC2.87□□□□□ -1.95
CNOT4O95628 SNORD32B-201ENST00000364460 84 ntBASIC2.87□□□□□ -1.95
CNOT4O95628 RNA5SP205-201ENST00000364653 136 ntBASIC2.87□□□□□ -1.95
CNOT4O95628 RNU6-144P-201ENST00000383951 107 ntBASIC2.87□□□□□ -1.95
CNOT4O95628 MIR1185-2-201ENST00000408687 86 ntBASIC2.87□□□□□ -1.95
CNOT4O95628 CST9LP2-201ENST00000437612 320 ntBASIC2.87□□□□□ -1.95
CNOT4O95628 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.87□□□□□ -1.95
CNOT4O95628 RNU5F-4P-201ENST00000516581 114 ntBASIC2.87□□□□□ -1.95
CNOT4O95628 RNU6-971P-201ENST00000516920 106 ntBASIC2.87□□□□□ -1.95
CNOT4O95628 MIR4724-201ENST00000579485 89 ntBASIC2.87□□□□□ -1.95
CNOT4O95628 AL355297.2-201ENST00000604792 129 ntBASIC2.87□□□□□ -1.95
CNOT4O95628 AC090517.3-201ENST00000625170 141 ntBASIC2.87□□□□□ -1.95
CNOT4O95628 AP006437.1-201ENST00000641440 3685 ntBASIC2.87□□□□□ -1.95
CNOT4O95628 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.87□□□□□ -1.95
CNOT4O95628 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CNOT4O95628 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CNOT4O95628 SNORD114-7-201ENST00000362520 77 ntBASIC2.86□□□□□ -1.95
CNOT4O95628 Y_RNA.127-201ENST00000363386 109 ntBASIC2.86□□□□□ -1.95
CNOT4O95628 Y_RNA.172-201ENST00000363765 102 ntBASIC2.86□□□□□ -1.95
CNOT4O95628 Y_RNA.229-201ENST00000364347 113 ntBASIC2.86□□□□□ -1.95
CNOT4O95628 SNORA51.4-201ENST00000364993 124 ntBASIC2.86□□□□□ -1.95
CNOT4O95628 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CNOT4O95628 RNU6-643P-201ENST00000384018 107 ntBASIC2.86□□□□□ -1.95
CNOT4O95628 SNORA20-201ENST00000384662 132 ntBASIC2.86□□□□□ -1.95
CNOT4O95628 MIR15B-201ENST00000385045 98 ntBASIC2.86□□□□□ -1.95
CNOT4O95628 MT-TT-201ENST00000387460 66 ntBASIC2.86□□□□□ -1.95
CNOT4O95628 RNA5SP229-201ENST00000410809 99 ntBASIC2.86□□□□□ -1.95
CNOT4O95628 HSPE1P21-201ENST00000438283 308 ntBASIC2.86□□□□□ -1.95
CNOT4O95628 AC090515.1-201ENST00000465295 476 ntBASIC2.86□□□□□ -1.95
CNOT4O95628 HMGN2P9-201ENST00000476875 229 ntBASIC2.86□□□□□ -1.95
CNOT4O95628 SNORA64.4-201ENST00000516632 81 ntBASIC2.86□□□□□ -1.95
CNOT4O95628 RNU6-1098P-201ENST00000516772 96 ntBASIC2.86□□□□□ -1.95
CNOT4O95628 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.86□□□□□ -1.95
CNOT4O95628 AC112693.2-201ENST00000556538 232 ntBASIC2.86□□□□□ -1.95
CNOT4O95628 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.86□□□□□ -1.95
CNOT4O95628 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CNOT4O95628 MIR622-201ENST00000638396 96 ntBASIC2.86□□□□□ -1.95
CNOT4O95628 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.86□□□□□ -1.95
CNOT4O95628 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CNOT4O95628 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CNOT4O95628 MIR422A-201ENST00000362286 90 ntBASIC2.85□□□□□ -1.95
CNOT4O95628 RNU1-70P-201ENST00000362618 164 ntBASIC2.85□□□□□ -1.95
CNOT4O95628 Y_RNA.124-201ENST00000363339 93 ntBASIC2.85□□□□□ -1.95
CNOT4O95628 Y_RNA.218-201ENST00000364218 104 ntBASIC2.85□□□□□ -1.95
CNOT4O95628 Y_RNA.261-201ENST00000364631 102 ntBASIC2.85□□□□□ -1.95
CNOT4O95628 RNA5SP125-201ENST00000364843 120 ntBASIC2.85□□□□□ -1.95
CNOT4O95628 MIR539-201ENST00000365690 78 ntBASIC2.85□□□□□ -1.95
CNOT4O95628 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CNOT4O95628 MIR29B2-201ENST00000385055 81 ntBASIC2.85□□□□□ -1.95
CNOT4O95628 RNU6-1228P-201ENST00000391014 107 ntBASIC2.85□□□□□ -1.95
CNOT4O95628 SNORD37.2-201ENST00000391075 66 ntBASIC2.85□□□□□ -1.95
CNOT4O95628 MIR873-201ENST00000401120 77 ntBASIC2.85□□□□□ -1.95
CNOT4O95628 HMGN2P35-201ENST00000412164 270 ntBASIC2.85□□□□□ -1.95
CNOT4O95628 RPL23AP7-203ENST00000449021 469 ntBASIC2.85□□□□□ -1.95
CNOT4O95628 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.85□□□□□ -1.95
CNOT4O95628 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.85□□□□□ -1.95
CNOT4O95628 MIR5194-201ENST00000582634 120 ntBASIC2.85□□□□□ -1.95
CNOT4O95628 MIR3124-201ENST00000582636 67 ntBASIC2.85□□□□□ -1.95
CNOT4O95628 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.85□□□□□ -1.95
CNOT4O95628 MIR548AY-201ENST00000617669 107 ntBASIC2.85□□□□□ -1.95
CNOT4O95628 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CNOT4O95628 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CNOT4O95628 SNORA80A-201ENST00000363922 136 ntBASIC2.84□□□□□ -1.95
CNOT4O95628 Y_RNA.273-201ENST00000364703 102 ntBASIC2.84□□□□□ -1.95
CNOT4O95628 U8.7-201ENST00000364940 136 ntBASIC2.84□□□□□ -1.95
CNOT4O95628 RNU6-407P-201ENST00000365280 104 ntBASIC2.84□□□□□ -1.95
CNOT4O95628 SNORD116-14-201ENST00000383894 92 ntBASIC2.84□□□□□ -1.95
CNOT4O95628 SNORD116-17-201ENST00000383929 92 ntBASIC2.84□□□□□ -1.95
CNOT4O95628 Y_RNA.420-201ENST00000384043 110 ntBASIC2.84□□□□□ -1.95
CNOT4O95628 SNORD116-15-201ENST00000384445 92 ntBASIC2.84□□□□□ -1.95
CNOT4O95628 SNORD116-19-201ENST00000384729 92 ntBASIC2.84□□□□□ -1.95
CNOT4O95628 AL606845.1-201ENST00000404881 255 ntBASIC2.84□□□□□ -1.95
CNOT4O95628 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.84□□□□□ -1.95
CNOT4O95628 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.84□□□□□ -1.95
CNOT4O95628 AL161788.1-201ENST00000441805 169 ntBASIC2.84□□□□□ -1.95
CNOT4O95628 RNU6-1333P-201ENST00000516162 93 ntBASIC2.84□□□□□ -1.95
CNOT4O95628 MIR2276-201ENST00000516886 89 ntBASIC2.84□□□□□ -1.95
CNOT4O95628 AC068647.2-201ENST00000637380 353 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms