Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 RNU2-12P-201ENST00000517216 168 ntBASIC2.41□□□□□ -2.02
SNX2O60749 SNORD113-5-201ENST00000607261 78 ntBASIC2.41□□□□□ -2.02
SNX2O60749 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.41□□□□□ -2.02
SNX2O60749 AC013412.1-201ENST00000610687 192 ntBASIC2.41□□□□□ -2.02
SNX2O60749 AP001282.2-201ENST00000616149 309 ntBASIC2.41□□□□□ -2.02
SNX2O60749 snoZ196.1-201ENST00000625269 89 ntBASIC2.41□□□□□ -2.02
SNX2O60749 CTSLP2-204ENST00000629029 392 ntBASIC2.41□□□□□ -2.02
SNX2O60749 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.41□□□□□ -2.02
SNX2O60749 RNA5SP289-201ENST00000362332 137 ntBASIC2.4□□□□□ -2.03
SNX2O60749 RNU6-301P-201ENST00000384277 107 ntBASIC2.4□□□□□ -2.03
SNX2O60749 RNU6-21P-201ENST00000384710 107 ntBASIC2.4□□□□□ -2.03
SNX2O60749 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SNX2O60749 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.4□□□□□ -2.03
SNX2O60749 RPS27P21-201ENST00000486977 252 ntBASIC2.4□□□□□ -2.03
SNX2O60749 RNU6-155P-201ENST00000516347 100 ntBASIC2.4□□□□□ -2.03
SNX2O60749 RNU6-948P-201ENST00000516374 107 ntBASIC2.4□□□□□ -2.03
SNX2O60749 AC021269.2-201ENST00000532318 330 ntBASIC2.4□□□□□ -2.03
SNX2O60749 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.4□□□□□ -2.03
SNX2O60749 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.4□□□□□ -2.03
SNX2O60749 AC008749.1-201ENST00000597650 306 ntBASIC2.4□□□□□ -2.03
SNX2O60749 AC006001.4-201ENST00000622243 395 ntBASIC2.4□□□□□ -2.03
SNX2O60749 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.39□□□□□ -2.03
SNX2O60749 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SNX2O60749 AC010615.1-201ENST00000594254 1764 ntBASIC2.39□□□□□ -2.03
SNX2O60749 SNORD115-3-201ENST00000363100 82 ntBASIC2.39□□□□□ -2.03
SNX2O60749 SNORD114-6-201ENST00000364393 72 ntBASIC2.39□□□□□ -2.03
SNX2O60749 RNU6-702P-201ENST00000364982 107 ntBASIC2.39□□□□□ -2.03
SNX2O60749 AC016909.1-201ENST00000415916 166 ntBASIC2.39□□□□□ -2.03
SNX2O60749 AL158823.1-201ENST00000418441 478 ntBASIC2.39□□□□□ -2.03
SNX2O60749 RNU6-221P-201ENST00000459541 99 ntBASIC2.39□□□□□ -2.03
SNX2O60749 AC114982.1-201ENST00000469402 321 ntBASIC2.39□□□□□ -2.03
SNX2O60749 RN7SL636P-201ENST00000497504 294 ntBASIC2.39□□□□□ -2.03
SNX2O60749 DEFB108E-201ENST00000524692 240 ntBASIC2.39□□□□□ -2.03
SNX2O60749 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.39□□□□□ -2.03
SNX2O60749 SNORD53-201ENST00000579969 78 ntBASIC2.39□□□□□ -2.03
SNX2O60749 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.39□□□□□ -2.03
SNX2O60749 AL590240.4-201ENST00000616908 390 ntBASIC2.39□□□□□ -2.03
SNX2O60749 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.38□□□□□ -2.03
SNX2O60749 ZNF702P-202ENST00000434269 1966 ntBASIC2.38□□□□□ -2.03
SNX2O60749 RNU1-58P-201ENST00000362413 163 ntBASIC2.38□□□□□ -2.03
SNX2O60749 Y_RNA.237-201ENST00000364439 102 ntBASIC2.38□□□□□ -2.03
SNX2O60749 RNU1-51P-201ENST00000365345 176 ntBASIC2.38□□□□□ -2.03
SNX2O60749 RNU6-160P-201ENST00000384591 107 ntBASIC2.38□□□□□ -2.03
SNX2O60749 Y_RNA.556-201ENST00000384677 113 ntBASIC2.38□□□□□ -2.03
SNX2O60749 AL359511.1-201ENST00000402970 211 ntBASIC2.38□□□□□ -2.03
SNX2O60749 RNU2-38P-201ENST00000410856 79 ntBASIC2.38□□□□□ -2.03
SNX2O60749 RPL23AP36-201ENST00000413895 458 ntBASIC2.38□□□□□ -2.03
SNX2O60749 AL356379.1-201ENST00000414105 126 ntBASIC2.38□□□□□ -2.03
SNX2O60749 AL390729.2-201ENST00000416137 156 ntBASIC2.38□□□□□ -2.03
SNX2O60749 AC096920.1-201ENST00000423991 241 ntBASIC2.38□□□□□ -2.03
SNX2O60749 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.38□□□□□ -2.03
SNX2O60749 AC005042.3-201ENST00000453230 174 ntBASIC2.38□□□□□ -2.03
SNX2O60749 SNORD127-201ENST00000458892 86 ntBASIC2.38□□□□□ -2.03
SNX2O60749 AC234781.5-201ENST00000508429 271 ntBASIC2.38□□□□□ -2.03
SNX2O60749 AC025647.1-201ENST00000517879 253 ntBASIC2.38□□□□□ -2.03
SNX2O60749 AC087441.2-201ENST00000529141 262 ntBASIC2.38□□□□□ -2.03
SNX2O60749 AC004817.2-201ENST00000561794 651 ntBASIC2.38□□□□□ -2.03
SNX2O60749 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.38□□□□□ -2.03
SNX2O60749 AP000942.4-201ENST00000604811 241 ntBASIC2.38□□□□□ -2.03
SNX2O60749 U1.36-201ENST00000620684 176 ntBASIC2.38□□□□□ -2.03
SNX2O60749 U6.115-201ENST00000636045 103 ntBASIC2.38□□□□□ -2.03
SNX2O60749 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.38□□□□□ -2.03
SNX2O60749 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SNX2O60749 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.37□□□□□ -2.03
SNX2O60749 RNU4-90P-201ENST00000362773 141 ntBASIC2.37□□□□□ -2.03
SNX2O60749 SNORD115-30-201ENST00000364117 82 ntBASIC2.37□□□□□ -2.03
SNX2O60749 Y_RNA.243-201ENST00000364481 109 ntBASIC2.37□□□□□ -2.03
SNX2O60749 RNU6-290P-201ENST00000365212 101 ntBASIC2.37□□□□□ -2.03
SNX2O60749 RNU6-1235P-201ENST00000384559 107 ntBASIC2.37□□□□□ -2.03
SNX2O60749 RNU11-3P-201ENST00000391111 133 ntBASIC2.37□□□□□ -2.03
SNX2O60749 U3.40-201ENST00000408706 208 ntBASIC2.37□□□□□ -2.03
SNX2O60749 AL353689.1-201ENST00000438895 199 ntBASIC2.37□□□□□ -2.03
SNX2O60749 MRPS10P1-201ENST00000448483 130 ntBASIC2.37□□□□□ -2.03
SNX2O60749 AC074290.1-201ENST00000448883 135 ntBASIC2.37□□□□□ -2.03
SNX2O60749 RNU6-498P-201ENST00000459468 107 ntBASIC2.37□□□□□ -2.03
SNX2O60749 TRBV12-1-201ENST00000479785 344 ntBASIC2.37□□□□□ -2.03
SNX2O60749 RNU6-436P-201ENST00000516171 114 ntBASIC2.37□□□□□ -2.03
SNX2O60749 AC023157.2-201ENST00000540596 141 ntBASIC2.37□□□□□ -2.03
SNX2O60749 MIR3145-201ENST00000580727 82 ntBASIC2.37□□□□□ -2.03
SNX2O60749 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.37□□□□□ -2.03
SNX2O60749 AC127459.3-201ENST00000624328 466 ntBASIC2.37□□□□□ -2.03
SNX2O60749 Y_RNA.288-201ENST00000364854 92 ntBASIC2.36□□□□□ -2.03
SNX2O60749 Y_RNA.383-201ENST00000383855 97 ntBASIC2.36□□□□□ -2.03
SNX2O60749 Y_RNA.418-201ENST00000384029 102 ntBASIC2.36□□□□□ -2.03
SNX2O60749 Y_RNA.518-201ENST00000384552 113 ntBASIC2.36□□□□□ -2.03
SNX2O60749 AL355796.1-201ENST00000406706 323 ntBASIC2.36□□□□□ -2.03
SNX2O60749 AL357134.1-201ENST00000445848 426 ntBASIC2.36□□□□□ -2.03
SNX2O60749 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.36□□□□□ -2.03
SNX2O60749 AC026436.1-201ENST00000510537 270 ntBASIC2.36□□□□□ -2.03
SNX2O60749 RNU6-1338P-201ENST00000516328 91 ntBASIC2.36□□□□□ -2.03
SNX2O60749 SCARNA24.2-201ENST00000516968 130 ntBASIC2.36□□□□□ -2.03
SNX2O60749 AC046143.2-201ENST00000609789 160 ntBASIC2.36□□□□□ -2.03
SNX2O60749 AC062037.2-201ENST00000610137 73 ntBASIC2.36□□□□□ -2.03
SNX2O60749 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SNX2O60749 ZNF658B-202ENST00000615961 3375 ntBASIC2.36□□□□□ -2.03
SNX2O60749 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SNX2O60749 AC009487.4-201ENST00000624969 3585 ntBASIC2.35□□□□□ -2.03
SNX2O60749 RNU6-1164P-201ENST00000364428 107 ntBASIC2.35□□□□□ -2.03
SNX2O60749 Y_RNA.329-201ENST00000365209 107 ntBASIC2.35□□□□□ -2.03
SNX2O60749 SNORA67.4-201ENST00000384688 142 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms