Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ACTN4O43707 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ACTN4O43707 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ACTN4O43707 RNA5SP42-201ENST00000364278 115 ntBASIC4.13□□□□□ -1.75
ACTN4O43707 Y_RNA.290-201ENST00000364879 114 ntBASIC4.13□□□□□ -1.75
ACTN4O43707 RNU6-242P-201ENST00000384359 107 ntBASIC4.13□□□□□ -1.75
ACTN4O43707 MIR30B-201ENST00000384850 88 ntBASIC4.13□□□□□ -1.75
ACTN4O43707 AC017083.1-201ENST00000428093 483 ntBASIC4.13□□□□□ -1.75
ACTN4O43707 RNU2-13P-201ENST00000515909 113 ntBASIC4.13□□□□□ -1.75
ACTN4O43707 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.13□□□□□ -1.75
ACTN4O43707 RNA5SP395-201ENST00000516567 118 ntBASIC4.13□□□□□ -1.75
ACTN4O43707 MIR4738-201ENST00000579134 87 ntBASIC4.13□□□□□ -1.75
ACTN4O43707 AC073413.2-201ENST00000604332 360 ntBASIC4.13□□□□□ -1.75
ACTN4O43707 AC090115.4-201ENST00000609970 188 ntBASIC4.13□□□□□ -1.75
ACTN4O43707 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ACTN4O43707 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.13□□□□□ -1.75
ACTN4O43707 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ACTN4O43707 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
ACTN4O43707 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ACTN4O43707 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ACTN4O43707 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ACTN4O43707 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.12□□□□□ -1.75
ACTN4O43707 Y_RNA.221-201ENST00000364248 96 ntBASIC4.12□□□□□ -1.75
ACTN4O43707 RNU6-1189P-201ENST00000383958 107 ntBASIC4.12□□□□□ -1.75
ACTN4O43707 Y_RNA.410-201ENST00000383992 113 ntBASIC4.12□□□□□ -1.75
ACTN4O43707 RNU6-816P-201ENST00000390914 107 ntBASIC4.12□□□□□ -1.75
ACTN4O43707 RNU6-1268P-201ENST00000391214 107 ntBASIC4.12□□□□□ -1.75
ACTN4O43707 RNU6-1239P-201ENST00000391310 107 ntBASIC4.12□□□□□ -1.75
ACTN4O43707 RPL23AP67-201ENST00000465341 474 ntBASIC4.12□□□□□ -1.75
ACTN4O43707 AC006445.1-201ENST00000491925 405 ntBASIC4.12□□□□□ -1.75
ACTN4O43707 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC4.12□□□□□ -1.75
ACTN4O43707 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.12□□□□□ -1.75
ACTN4O43707 Y_RNA.714-201ENST00000517065 90 ntBASIC4.12□□□□□ -1.75
ACTN4O43707 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC4.12□□□□□ -1.75
ACTN4O43707 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.12□□□□□ -1.75
ACTN4O43707 MIR4765-201ENST00000585007 77 ntBASIC4.12□□□□□ -1.75
ACTN4O43707 AC007229.1-201ENST00000590455 412 ntBASIC4.12□□□□□ -1.75
ACTN4O43707 FAM71BP1-201ENST00000604431 523 ntBASIC4.12□□□□□ -1.75
ACTN4O43707 AP000553.6-201ENST00000641242 118 ntBASIC4.12□□□□□ -1.75
ACTN4O43707 ZNF720P1-201ENST00000562403 1939 ntBASIC4.12□□□□□ -1.75
ACTN4O43707 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
ACTN4O43707 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.12□□□□□ -1.75
ACTN4O43707 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ACTN4O43707 Y_RNA.244-201ENST00000364484 109 ntBASIC4.11□□□□□ -1.75
ACTN4O43707 RNU6-1104P-201ENST00000384723 104 ntBASIC4.11□□□□□ -1.75
ACTN4O43707 MIR802-201ENST00000390235 94 ntBASIC4.11□□□□□ -1.75
ACTN4O43707 SCGB1D5P-201ENST00000515134 247 ntBASIC4.11□□□□□ -1.75
ACTN4O43707 RNU7-123P-201ENST00000515911 60 ntBASIC4.11□□□□□ -1.75
ACTN4O43707 AC087685.1-201ENST00000587507 141 ntBASIC4.11□□□□□ -1.75
ACTN4O43707 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ACTN4O43707 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ACTN4O43707 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ACTN4O43707 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ACTN4O43707 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ACTN4O43707 RNU6-497P-201ENST00000365316 104 ntBASIC4.1□□□□□ -1.75
ACTN4O43707 RNY1P6-201ENST00000384193 109 ntBASIC4.1□□□□□ -1.75
ACTN4O43707 AC004975.1-201ENST00000428733 208 ntBASIC4.1□□□□□ -1.75
ACTN4O43707 HMGN2P18-201ENST00000450680 270 ntBASIC4.1□□□□□ -1.75
ACTN4O43707 RNU7-170P-201ENST00000459303 61 ntBASIC4.1□□□□□ -1.75
ACTN4O43707 RNA5SP112-201ENST00000515937 99 ntBASIC4.1□□□□□ -1.75
ACTN4O43707 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
ACTN4O43707 AC022523.2-201ENST00000561045 150 ntBASIC4.1□□□□□ -1.75
ACTN4O43707 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.1□□□□□ -1.75
ACTN4O43707 MIR5187-201ENST00000583479 76 ntBASIC4.1□□□□□ -1.75
ACTN4O43707 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
ACTN4O43707 U7.8-201ENST00000619968 63 ntBASIC4.1□□□□□ -1.75
ACTN4O43707 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ACTN4O43707 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ACTN4O43707 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
ACTN4O43707 ZNF271P-202ENST00000465539 1970 ntBASIC4.09□□□□□ -1.75
ACTN4O43707 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ACTN4O43707 RNU6-1276P-201ENST00000365372 104 ntBASIC4.09□□□□□ -1.75
ACTN4O43707 RNU11-5P-201ENST00000391216 129 ntBASIC4.09□□□□□ -1.75
ACTN4O43707 Y_RNA.601-201ENST00000410500 113 ntBASIC4.09□□□□□ -1.75
ACTN4O43707 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.09□□□□□ -1.75
ACTN4O43707 AC025750.2-201ENST00000442609 450 ntBASIC4.09□□□□□ -1.75
ACTN4O43707 RNA5SP57-201ENST00000459463 123 ntBASIC4.09□□□□□ -1.75
ACTN4O43707 RNU6-1291P-201ENST00000516591 104 ntBASIC4.09□□□□□ -1.75
ACTN4O43707 MIR2116-201ENST00000517221 80 ntBASIC4.09□□□□□ -1.75
ACTN4O43707 AC007224.1-201ENST00000564410 144 ntBASIC4.09□□□□□ -1.75
ACTN4O43707 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.09□□□□□ -1.75
ACTN4O43707 AC022254.1-201ENST00000567857 235 ntBASIC4.09□□□□□ -1.75
ACTN4O43707 CEP170P1-201ENST00000502249 4587 ntBASIC4.09□□□□□ -1.75
ACTN4O43707 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
ACTN4O43707 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.09□□□□□ -1.76
ACTN4O43707 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ACTN4O43707 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
ACTN4O43707 MIR126-201ENST00000362291 85 ntBASIC4.08□□□□□ -1.76
ACTN4O43707 Y_RNA.10-201ENST00000362371 110 ntBASIC4.08□□□□□ -1.76
ACTN4O43707 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
ACTN4O43707 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.08□□□□□ -1.76
ACTN4O43707 RNU6-1186P-201ENST00000410429 97 ntBASIC4.08□□□□□ -1.76
ACTN4O43707 RPS15AP28-201ENST00000435088 386 ntBASIC4.08□□□□□ -1.76
ACTN4O43707 TNPO1P3-201ENST00000436471 2662 ntBASIC4.08□□□□□ -1.76
ACTN4O43707 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ACTN4O43707 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.08□□□□□ -1.76
ACTN4O43707 AC026402.1-201ENST00000513642 170 ntBASIC4.08□□□□□ -1.76
ACTN4O43707 SNORA4.4-201ENST00000515921 135 ntBASIC4.08□□□□□ -1.76
ACTN4O43707 RNA5SP367-201ENST00000516557 118 ntBASIC4.08□□□□□ -1.76
ACTN4O43707 SNORA31.21-201ENST00000517180 77 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms