Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.86□□□□□ -2.27
CHMP2AO43633 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.86□□□□□ -2.27
CHMP2AO43633 RPS4XP11-201ENST00000446897 772 ntBASIC0.86□□□□□ -2.27
CHMP2AO43633 SNORD124-201ENST00000459577 104 ntBASIC0.86□□□□□ -2.27
CHMP2AO43633 SNORA31.2-201ENST00000516019 134 ntBASIC0.86□□□□□ -2.27
CHMP2AO43633 RNU6-1146P-201ENST00000516282 102 ntBASIC0.86□□□□□ -2.27
CHMP2AO43633 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.86□□□□□ -2.27
CHMP2AO43633 MIR4661-201ENST00000582720 75 ntBASIC0.86□□□□□ -2.27
CHMP2AO43633 SNORA4-201ENST00000584302 138 ntBASIC0.86□□□□□ -2.27
CHMP2AO43633 AC080078.2-201ENST00000603766 501 ntBASIC0.86□□□□□ -2.27
CHMP2AO43633 MIR6734-201ENST00000621166 68 ntBASIC0.86□□□□□ -2.27
CHMP2AO43633 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
CHMP2AO43633 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.85□□□□□ -2.27
CHMP2AO43633 RNU6-128P-201ENST00000383976 107 ntBASIC0.85□□□□□ -2.27
CHMP2AO43633 Y_RNA.405-201ENST00000383979 100 ntBASIC0.85□□□□□ -2.27
CHMP2AO43633 Y_RNA.451-201ENST00000384200 100 ntBASIC0.85□□□□□ -2.27
CHMP2AO43633 Y_RNA.524-201ENST00000384564 100 ntBASIC0.85□□□□□ -2.27
CHMP2AO43633 Y_RNA.561-201ENST00000384694 100 ntBASIC0.85□□□□□ -2.27
CHMP2AO43633 RNU6-159P-201ENST00000391080 106 ntBASIC0.85□□□□□ -2.27
CHMP2AO43633 AL355796.1-201ENST00000406706 323 ntBASIC0.85□□□□□ -2.27
CHMP2AO43633 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.85□□□□□ -2.27
CHMP2AO43633 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.85□□□□□ -2.27
CHMP2AO43633 AC093850.1-201ENST00000454121 251 ntBASIC0.85□□□□□ -2.27
CHMP2AO43633 SNORD65B-201ENST00000459126 73 ntBASIC0.85□□□□□ -2.27
CHMP2AO43633 RPL39P38-201ENST00000467018 153 ntBASIC0.85□□□□□ -2.27
CHMP2AO43633 AC048334.1-201ENST00000477975 159 ntBASIC0.85□□□□□ -2.27
CHMP2AO43633 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.85□□□□□ -2.27
CHMP2AO43633 AC245505.1-201ENST00000556398 224 ntBASIC0.85□□□□□ -2.27
CHMP2AO43633 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.85□□□□□ -2.27
CHMP2AO43633 U6.73-201ENST00000619194 103 ntBASIC0.85□□□□□ -2.27
CHMP2AO43633 MIR1321-201ENST00000637766 79 ntBASIC0.85□□□□□ -2.27
CHMP2AO43633 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
CHMP2AO43633 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.27
CHMP2AO43633 Y_RNA.122-201ENST00000363331 96 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 Y_RNA.194-201ENST00000363985 102 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 Y_RNA.269-201ENST00000364685 89 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 SNORD116-11-201ENST00000383882 92 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 Y_RNA.414-201ENST00000384011 101 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 RNU6-17P-201ENST00000384245 107 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 RNU6-18P-201ENST00000384527 107 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 RNU6-831P-201ENST00000384548 107 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 RNU6-541P-201ENST00000384709 110 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 MIR153-2-201ENST00000385225 87 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
CHMP2AO43633 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CHMP2AO43633 POLR2J4-204ENST00000418424 324 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 AC243428.1-201ENST00000421099 264 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 AC004941.2-201ENST00000427009 228 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 USP9YP30-201ENST00000430729 455 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 CALM2P4-201ENST00000430810 426 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.84□□□□□ -2.27
CHMP2AO43633 STAG3L5P-204ENST00000443759 179 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 MTND4P18-201ENST00000447010 465 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 AC024995.1-201ENST00000523014 93 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.84□□□□□ -2.27
CHMP2AO43633 AC124303.1-201ENST00000605703 360 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 AL357075.2-201ENST00000614906 189 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 SNORD3E-202ENST00000627253 216 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 AC100810.6-201ENST00000638068 285 ntBASIC0.84□□□□□ -2.27
CHMP2AO43633 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.83□□□□□ -2.28
CHMP2AO43633 SNORD115-32-201ENST00000364079 82 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 RNU1-36P-201ENST00000365130 165 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 Y_RNA.363-201ENST00000365529 113 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 RNU6-245P-201ENST00000384020 107 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 RNU6-842P-201ENST00000384269 107 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 MIR100-201ENST00000385259 80 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 AC114482.1-201ENST00000418010 247 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 AC008134.1-201ENST00000420943 193 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 MTND3P23-201ENST00000431980 347 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 MTND1P1-201ENST00000445453 368 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 AC074290.1-201ENST00000448883 135 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 AC010469.2-201ENST00000496412 480 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 PSMC1P5-201ENST00000512850 177 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 RNA5SP220-201ENST00000516298 104 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 RNU6-506P-201ENST00000516553 94 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 RNA5SP168-201ENST00000516642 112 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 RNU6-107P-201ENST00000516643 102 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 RN7SKP49-201ENST00000516675 260 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 RNA5SP54-201ENST00000516951 92 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 MIR5696-201ENST00000578474 85 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.83□□□□□ -2.28
CHMP2AO43633 MIR4438-201ENST00000585271 93 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 RMST_2.1-201ENST00000617263 136 ntBASIC0.83□□□□□ -2.28
CHMP2AO43633 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.83□□□□□ -2.28
CHMP2AO43633 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CHMP2AO43633 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CHMP2AO43633 U3.8-201ENST00000363675 217 ntBASIC0.82□□□□□ -2.28
CHMP2AO43633 RNU6-793P-201ENST00000384233 104 ntBASIC0.82□□□□□ -2.28
CHMP2AO43633 Y_RNA.530-201ENST00000384587 101 ntBASIC0.82□□□□□ -2.28
CHMP2AO43633 MIR19B1-201ENST00000384829 87 ntBASIC0.82□□□□□ -2.28
CHMP2AO43633 MIR515-2-201ENST00000384883 83 ntBASIC0.82□□□□□ -2.28
CHMP2AO43633 MIR515-1-201ENST00000384884 83 ntBASIC0.82□□□□□ -2.28
CHMP2AO43633 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
CHMP2AO43633 MIR518E-201ENST00000385252 88 ntBASIC0.82□□□□□ -2.28
CHMP2AO43633 SNORD41-201ENST00000386967 70 ntBASIC0.82□□□□□ -2.28
CHMP2AO43633 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CHMP2AO43633 MRPL42P3-201ENST00000401492 326 ntBASIC0.82□□□□□ -2.28
CHMP2AO43633 MIR320B2-201ENST00000408479 138 ntBASIC0.82□□□□□ -2.28
CHMP2AO43633 RNU6-1001P-201ENST00000411265 100 ntBASIC0.82□□□□□ -2.28
CHMP2AO43633 AC006461.1-201ENST00000412637 326 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms