Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 U6.105-201ENST00000637379 88 ntBASIC4.06□□□□□ -1.76
HOXA2O43364 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXA2O43364 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXA2O43364 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXA2O43364 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXA2O43364 MIR448-201ENST00000362131 111 ntBASIC4.05□□□□□ -1.76
HOXA2O43364 SNORA63.5-201ENST00000363548 123 ntBASIC4.05□□□□□ -1.76
HOXA2O43364 RNU6-1186P-201ENST00000410429 97 ntBASIC4.05□□□□□ -1.76
HOXA2O43364 AC009969.1-201ENST00000438726 172 ntBASIC4.05□□□□□ -1.76
HOXA2O43364 SNRPGP13-201ENST00000442212 177 ntBASIC4.05□□□□□ -1.76
HOXA2O43364 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.05□□□□□ -1.76
HOXA2O43364 AC233266.1-201ENST00000454518 96 ntBASIC4.05□□□□□ -1.76
HOXA2O43364 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXA2O43364 Y_RNA.666-201ENST00000516187 112 ntBASIC4.05□□□□□ -1.76
HOXA2O43364 RN7SKP282-201ENST00000516824 299 ntBASIC4.05□□□□□ -1.76
HOXA2O43364 Y_RNA.714-201ENST00000517065 90 ntBASIC4.05□□□□□ -1.76
HOXA2O43364 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXA2O43364 AC087685.1-201ENST00000587507 141 ntBASIC4.05□□□□□ -1.76
HOXA2O43364 AL161756.2-201ENST00000604597 246 ntBASIC4.05□□□□□ -1.76
HOXA2O43364 SNORA62.6-201ENST00000606322 83 ntBASIC4.05□□□□□ -1.76
HOXA2O43364 RNU6-94P-201ENST00000607728 107 ntBASIC4.05□□□□□ -1.76
HOXA2O43364 AC242852.1-201ENST00000612151 96 ntBASIC4.05□□□□□ -1.76
HOXA2O43364 U2.20-201ENST00000613956 192 ntBASIC4.05□□□□□ -1.76
HOXA2O43364 UCA1.1-201ENST00000620952 75 ntBASIC4.05□□□□□ -1.76
HOXA2O43364 AC244015.1-201ENST00000622301 99 ntBASIC4.05□□□□□ -1.76
HOXA2O43364 AL035470.1-201ENST00000622571 220 ntBASIC4.05□□□□□ -1.76
HOXA2O43364 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.05□□□□□ -1.76
HOXA2O43364 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXA2O43364 MAPK10-362ENST00000641864 4484 ntBASIC4.05□□□□□ -1.76
HOXA2O43364 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXA2O43364 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HOXA2O43364 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXA2O43364 Y_RNA.323-201ENST00000365157 109 ntBASIC4.04□□□□□ -1.76
HOXA2O43364 RNA5SP424-201ENST00000390988 115 ntBASIC4.04□□□□□ -1.76
HOXA2O43364 SNORD77.3-201ENST00000391113 65 ntBASIC4.04□□□□□ -1.76
HOXA2O43364 RNY4P29-201ENST00000410801 97 ntBASIC4.04□□□□□ -1.76
HOXA2O43364 RNU2-32P-201ENST00000411193 191 ntBASIC4.04□□□□□ -1.76
HOXA2O43364 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXA2O43364 RPS12P18-201ENST00000442381 270 ntBASIC4.04□□□□□ -1.76
HOXA2O43364 CYCSP35-201ENST00000451978 304 ntBASIC4.04□□□□□ -1.76
HOXA2O43364 AC025554.1-201ENST00000505641 188 ntBASIC4.04□□□□□ -1.76
HOXA2O43364 SCARNA15-202ENST00000516881 127 ntBASIC4.04□□□□□ -1.76
HOXA2O43364 AC068657.1-201ENST00000520807 306 ntBASIC4.04□□□□□ -1.76
HOXA2O43364 AC007229.1-201ENST00000590455 412 ntBASIC4.04□□□□□ -1.76
HOXA2O43364 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXA2O43364 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXA2O43364 IPO8P1-201ENST00000455509 3109 ntBASIC4.04□□□□□ -1.76
HOXA2O43364 AC091564.4-201ENST00000533934 2194 ntBASIC4.04□□□□□ -1.76
HOXA2O43364 GABRG2-229ENST00000641017 3628 ntBASIC4.04□□□□□ -1.76
HOXA2O43364 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXA2O43364 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXA2O43364 AC073346.2-201ENST00000624724 2058 ntBASIC4.04□□□□□ -1.76
HOXA2O43364 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
HOXA2O43364 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HOXA2O43364 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXA2O43364 RNU6-743P-201ENST00000364151 106 ntBASIC4.03□□□□□ -1.76
HOXA2O43364 RNU1-96P-201ENST00000364163 162 ntBASIC4.03□□□□□ -1.76
HOXA2O43364 Y_RNA.213-201ENST00000364178 111 ntBASIC4.03□□□□□ -1.76
HOXA2O43364 MIR483-201ENST00000385070 76 ntBASIC4.03□□□□□ -1.76
HOXA2O43364 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HOXA2O43364 AC123900.1-201ENST00000420390 96 ntBASIC4.03□□□□□ -1.76
HOXA2O43364 PHBP14-201ENST00000512887 367 ntBASIC4.03□□□□□ -1.76
HOXA2O43364 AC022217.4-201ENST00000604389 163 ntBASIC4.03□□□□□ -1.76
HOXA2O43364 AL137849.1-201ENST00000604767 169 ntBASIC4.03□□□□□ -1.76
HOXA2O43364 MIR7851-201ENST00000610611 160 ntBASIC4.03□□□□□ -1.76
HOXA2O43364 MIR7975-201ENST00000619350 68 ntBASIC4.03□□□□□ -1.76
HOXA2O43364 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXA2O43364 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXA2O43364 ZNF962P-201ENST00000443465 3140 ntBASIC4.02□□□□□ -1.77
HOXA2O43364 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HOXA2O43364 RNY4P6-201ENST00000363667 96 ntBASIC4.02□□□□□ -1.77
HOXA2O43364 RNU6-525P-201ENST00000363685 104 ntBASIC4.02□□□□□ -1.77
HOXA2O43364 Y_RNA.198-201ENST00000364013 98 ntBASIC4.02□□□□□ -1.77
HOXA2O43364 RNA5SP139-201ENST00000364340 117 ntBASIC4.02□□□□□ -1.77
HOXA2O43364 SNORA51.10-201ENST00000384418 136 ntBASIC4.02□□□□□ -1.77
HOXA2O43364 CYCSP4-201ENST00000429682 331 ntBASIC4.02□□□□□ -1.77
HOXA2O43364 RNU7-99P-201ENST00000516271 62 ntBASIC4.02□□□□□ -1.77
HOXA2O43364 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.02□□□□□ -1.77
HOXA2O43364 AP000553.6-201ENST00000641242 118 ntBASIC4.02□□□□□ -1.77
HOXA2O43364 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
HOXA2O43364 AC018630.2-201ENST00000534866 2403 ntBASIC4.02□□□□□ -1.77
HOXA2O43364 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXA2O43364 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
HOXA2O43364 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXA2O43364 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXA2O43364 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXA2O43364 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXA2O43364 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HOXA2O43364 CD24P4-201ENST00000382840 243 ntBASIC4.01□□□□□ -1.77
HOXA2O43364 MIR548A2-201ENST00000384956 97 ntBASIC4.01□□□□□ -1.77
HOXA2O43364 MIR759-201ENST00000390224 91 ntBASIC4.01□□□□□ -1.77
HOXA2O43364 AL138878.1-201ENST00000405131 347 ntBASIC4.01□□□□□ -1.77
HOXA2O43364 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXA2O43364 RNU6-240P-201ENST00000516098 97 ntBASIC4.01□□□□□ -1.77
HOXA2O43364 RNU6-1291P-201ENST00000516591 104 ntBASIC4.01□□□□□ -1.77
HOXA2O43364 AC069240.1-201ENST00000548774 375 ntBASIC4.01□□□□□ -1.77
HOXA2O43364 MIR5197-201ENST00000583721 112 ntBASIC4.01□□□□□ -1.77
HOXA2O43364 MIR7157-201ENST00000635801 60 ntBASIC4.01□□□□□ -1.77
HOXA2O43364 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXA2O43364 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms