Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SNORA4.4-201ENST00000515921 135 ntBASIC2.27□□□□□ -2.05
MSI1O43347 RNU7-110P-201ENST00000516891 62 ntBASIC2.27□□□□□ -2.05
MSI1O43347 RNU1-104P-201ENST00000517280 175 ntBASIC2.27□□□□□ -2.05
MSI1O43347 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.27□□□□□ -2.05
MSI1O43347 NDUFA5P6-201ENST00000542110 379 ntBASIC2.27□□□□□ -2.05
MSI1O43347 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.27□□□□□ -2.05
MSI1O43347 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.27□□□□□ -2.05
MSI1O43347 MIR4648-201ENST00000580107 72 ntBASIC2.27□□□□□ -2.05
MSI1O43347 MIR4658-201ENST00000584344 65 ntBASIC2.27□□□□□ -2.05
MSI1O43347 AC022441.3-201ENST00000605737 136 ntBASIC2.27□□□□□ -2.05
MSI1O43347 AC011373.1-201ENST00000607270 237 ntBASIC2.27□□□□□ -2.05
MSI1O43347 AC009831.4-201ENST00000620744 325 ntBASIC2.27□□□□□ -2.05
MSI1O43347 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
MSI1O43347 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
MSI1O43347 SNORA67.1-201ENST00000364749 141 ntBASIC2.26□□□□□ -2.05
MSI1O43347 RNU6-438P-201ENST00000365561 103 ntBASIC2.26□□□□□ -2.05
MSI1O43347 RNU6-418P-201ENST00000384035 107 ntBASIC2.26□□□□□ -2.05
MSI1O43347 MIR1185-2-201ENST00000408687 86 ntBASIC2.26□□□□□ -2.05
MSI1O43347 RNU6-1203P-201ENST00000410703 110 ntBASIC2.26□□□□□ -2.05
MSI1O43347 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.26□□□□□ -2.05
MSI1O43347 MTCO1P44-201ENST00000441935 243 ntBASIC2.26□□□□□ -2.05
MSI1O43347 PRELID3BP1-201ENST00000457142 540 ntBASIC2.26□□□□□ -2.05
MSI1O43347 RNU7-57P-201ENST00000459540 60 ntBASIC2.26□□□□□ -2.05
MSI1O43347 HMGB3P17-201ENST00000504195 649 ntBASIC2.26□□□□□ -2.05
MSI1O43347 AP000942.4-201ENST00000604811 241 ntBASIC2.26□□□□□ -2.05
MSI1O43347 AP001282.2-201ENST00000616149 309 ntBASIC2.26□□□□□ -2.05
MSI1O43347 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
MSI1O43347 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
MSI1O43347 Y_RNA.16-201ENST00000362421 102 ntBASIC2.25□□□□□ -2.05
MSI1O43347 SNORD81.1-201ENST00000363064 77 ntBASIC2.25□□□□□ -2.05
MSI1O43347 RNU6-702P-201ENST00000364982 107 ntBASIC2.25□□□□□ -2.05
MSI1O43347 SNORA72.2-201ENST00000365028 127 ntBASIC2.25□□□□□ -2.05
MSI1O43347 RNU6-1310P-201ENST00000384153 107 ntBASIC2.25□□□□□ -2.05
MSI1O43347 Y_RNA.446-201ENST00000384178 104 ntBASIC2.25□□□□□ -2.05
MSI1O43347 SNORA67.3-201ENST00000384366 140 ntBASIC2.25□□□□□ -2.05
MSI1O43347 Y_RNA.556-201ENST00000384677 113 ntBASIC2.25□□□□□ -2.05
MSI1O43347 MIR1262-201ENST00000408276 93 ntBASIC2.25□□□□□ -2.05
MSI1O43347 MIR1302-6-201ENST00000408466 90 ntBASIC2.25□□□□□ -2.05
MSI1O43347 SNORA11.4-201ENST00000408823 129 ntBASIC2.25□□□□□ -2.05
MSI1O43347 RNU2-54P-201ENST00000410299 190 ntBASIC2.25□□□□□ -2.05
MSI1O43347 RNA5SP475-201ENST00000410568 110 ntBASIC2.25□□□□□ -2.05
MSI1O43347 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
MSI1O43347 TRBVB-201ENST00000477100 408 ntBASIC2.25□□□□□ -2.05
MSI1O43347 SCARNA16.3-201ENST00000516595 184 ntBASIC2.25□□□□□ -2.05
MSI1O43347 RNU2-12P-201ENST00000517216 168 ntBASIC2.25□□□□□ -2.05
MSI1O43347 SNORD113-5-201ENST00000607261 78 ntBASIC2.25□□□□□ -2.05
MSI1O43347 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.25□□□□□ -2.05
MSI1O43347 AC022202.1-201ENST00000613515 211 ntBASIC2.25□□□□□ -2.05
MSI1O43347 MIR6132-201ENST00000622083 109 ntBASIC2.25□□□□□ -2.05
MSI1O43347 AC127459.3-201ENST00000624328 466 ntBASIC2.25□□□□□ -2.05
MSI1O43347 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
MSI1O43347 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.25□□□□□ -2.05
MSI1O43347 SNORD14D-201ENST00000384390 87 ntBASIC2.24□□□□□ -2.05
MSI1O43347 RNU1-148P-201ENST00000384472 162 ntBASIC2.24□□□□□ -2.05
MSI1O43347 RNU6-21P-201ENST00000384710 107 ntBASIC2.24□□□□□ -2.05
MSI1O43347 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.24□□□□□ -2.05
MSI1O43347 AC123900.1-201ENST00000420390 96 ntBASIC2.24□□□□□ -2.05
MSI1O43347 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.24□□□□□ -2.05
MSI1O43347 AC114982.1-201ENST00000469402 321 ntBASIC2.24□□□□□ -2.05
MSI1O43347 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.24□□□□□ -2.05
MSI1O43347 RNA5SP200-201ENST00000516360 103 ntBASIC2.24□□□□□ -2.05
MSI1O43347 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.24□□□□□ -2.05
MSI1O43347 AC004817.2-201ENST00000561794 651 ntBASIC2.24□□□□□ -2.05
MSI1O43347 MIR5694-201ENST00000581190 76 ntBASIC2.24□□□□□ -2.05
MSI1O43347 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.24□□□□□ -2.05
MSI1O43347 AL590240.4-201ENST00000616908 390 ntBASIC2.24□□□□□ -2.05
MSI1O43347 snoZ196.1-201ENST00000625269 89 ntBASIC2.24□□□□□ -2.05
MSI1O43347 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.24□□□□□ -2.05
MSI1O43347 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.24□□□□□ -2.05
MSI1O43347 AC010615.1-201ENST00000594254 1764 ntBASIC2.23□□□□□ -2.05
MSI1O43347 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
MSI1O43347 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
MSI1O43347 RNU6-290P-201ENST00000365212 101 ntBASIC2.23□□□□□ -2.05
MSI1O43347 Y_RNA.331-201ENST00000365267 102 ntBASIC2.23□□□□□ -2.05
MSI1O43347 MIR764-201ENST00000390811 85 ntBASIC2.23□□□□□ -2.05
MSI1O43347 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.23□□□□□ -2.05
MSI1O43347 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
MSI1O43347 RNU6-57P-201ENST00000411348 103 ntBASIC2.23□□□□□ -2.05
MSI1O43347 AC016909.1-201ENST00000415916 166 ntBASIC2.23□□□□□ -2.05
MSI1O43347 AL390729.2-201ENST00000416137 156 ntBASIC2.23□□□□□ -2.05
MSI1O43347 AC096920.1-201ENST00000423991 241 ntBASIC2.23□□□□□ -2.05
MSI1O43347 AC005042.3-201ENST00000453230 174 ntBASIC2.23□□□□□ -2.05
MSI1O43347 SEPT14P8-201ENST00000508026 178 ntBASIC2.23□□□□□ -2.05
MSI1O43347 RNU6-155P-201ENST00000516347 100 ntBASIC2.23□□□□□ -2.05
MSI1O43347 CYCSP26-201ENST00000534107 320 ntBASIC2.23□□□□□ -2.05
MSI1O43347 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.23□□□□□ -2.05
MSI1O43347 AC023157.2-201ENST00000540596 141 ntBASIC2.23□□□□□ -2.05
MSI1O43347 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.23□□□□□ -2.05
MSI1O43347 AL353997.5-201ENST00000618886 171 ntBASIC2.23□□□□□ -2.05
MSI1O43347 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.23□□□□□ -2.05
MSI1O43347 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
MSI1O43347 Y_RNA.4-201ENST00000362333 112 ntBASIC2.22□□□□□ -2.05
MSI1O43347 RNU4-90P-201ENST00000362773 141 ntBASIC2.22□□□□□ -2.05
MSI1O43347 SNORA38-201ENST00000363946 132 ntBASIC2.22□□□□□ -2.05
MSI1O43347 RNU6-1235P-201ENST00000384559 107 ntBASIC2.22□□□□□ -2.05
MSI1O43347 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
MSI1O43347 RNU2-38P-201ENST00000410856 79 ntBASIC2.22□□□□□ -2.05
MSI1O43347 SRIP3-201ENST00000413200 219 ntBASIC2.22□□□□□ -2.05
MSI1O43347 AC139712.2-201ENST00000424302 339 ntBASIC2.22□□□□□ -2.05
MSI1O43347 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms