Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC109327.2-201ENST00000448339 378 ntBASIC-0.94□□□□□ -2.56
CHD1O14646 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.94□□□□□ -2.56
CHD1O14646 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.94□□□□□ -2.56
CHD1O14646 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-0.94□□□□□ -2.56
CHD1O14646 MIR4788-201ENST00000639104 80 ntBASIC-0.94□□□□□ -2.56
CHD1O14646 RNY4P6-201ENST00000363667 96 ntBASIC-0.95□□□□□ -2.56
CHD1O14646 MIR578-201ENST00000384828 96 ntBASIC-0.95□□□□□ -2.56
CHD1O14646 MIR1302-7-201ENST00000408841 72 ntBASIC-0.95□□□□□ -2.56
CHD1O14646 AC013470.1-201ENST00000453438 462 ntBASIC-0.95□□□□□ -2.56
CHD1O14646 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.95□□□□□ -2.56
CHD1O14646 NAMPTP3-201ENST00000569273 224 ntBASIC-0.95□□□□□ -2.56
CHD1O14646 AC069545.1-201ENST00000605671 358 ntBASIC-0.95□□□□□ -2.56
CHD1O14646 AC097478.2-201ENST00000610572 514 ntBASIC-0.95□□□□□ -2.56
CHD1O14646 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.95□□□□□ -2.56
CHD1O14646 MT-TN-201ENST00000387400 73 ntBASIC-0.95□□□□□ -2.56
CHD1O14646 MTND1P4-201ENST00000435196 415 ntBASIC-0.95□□□□□ -2.56
CHD1O14646 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.95□□□□□ -2.56
CHD1O14646 SNORA74.3-201ENST00000517108 154 ntBASIC-0.95□□□□□ -2.56
CHD1O14646 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.95□□□□□ -2.56
CHD1O14646 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.95□□□□□ -2.56
CHD1O14646 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.95□□□□□ -2.56
CHD1O14646 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.95□□□□□ -2.56
CHD1O14646 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.96□□□□□ -2.56
CHD1O14646 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.96□□□□□ -2.56
CHD1O14646 AC109479.2-201ENST00000517842 174 ntBASIC-0.96□□□□□ -2.56
CHD1O14646 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.96□□□□□ -2.56
CHD1O14646 AC068790.2-201ENST00000602601 557 ntBASIC-0.96□□□□□ -2.56
CHD1O14646 RNY4P27-201ENST00000363341 96 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 RNU6-447P-201ENST00000410293 104 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 RNU6-355P-201ENST00000410427 104 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 RNU6-791P-201ENST00000410467 104 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 RNU6-705P-201ENST00000410601 104 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 RNU6-860P-201ENST00000410860 104 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 RNU6-785P-201ENST00000411324 104 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.97□□□□□ -2.56
CHD1O14646 MTCO1P27-201ENST00000448269 226 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 MTND3P25-201ENST00000509243 135 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 SNORA27.4-201ENST00000516650 95 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 RNU2-60P-201ENST00000517290 128 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 AC246785.4-201ENST00000605374 287 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 AC092574.1-201ENST00000609771 420 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 U6.90-201ENST00000614007 104 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 U6.70-201ENST00000620287 104 ntBASIC-0.97□□□□□ -2.56
CHD1O14646 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.98□□□□□ -2.57
CHD1O14646 RPS29P13-201ENST00000402041 169 ntBASIC-0.98□□□□□ -2.57
CHD1O14646 MTND3P20-201ENST00000407663 186 ntBASIC-0.98□□□□□ -2.57
CHD1O14646 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.98□□□□□ -2.57
CHD1O14646 RNU6-448P-201ENST00000517052 107 ntBASIC-0.98□□□□□ -2.57
CHD1O14646 RNU6-158P-201ENST00000517104 100 ntBASIC-0.98□□□□□ -2.57
CHD1O14646 DEFB130C-202ENST00000530001 230 ntBASIC-0.98□□□□□ -2.57
CHD1O14646 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.98□□□□□ -2.57
CHD1O14646 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.98□□□□□ -2.57
CHD1O14646 AC100830.2-201ENST00000581636 240 ntBASIC-0.98□□□□□ -2.57
CHD1O14646 AC091178.2-201ENST00000584401 117 ntBASIC-0.98□□□□□ -2.57
CHD1O14646 AL139286.2-201ENST00000606838 396 ntBASIC-0.98□□□□□ -2.57
CHD1O14646 AC005592.1-201ENST00000566527 1640 ntBASIC-0.98□□□□□ -2.57
CHD1O14646 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.98□□□□□ -2.57
CHD1O14646 RNU6-428P-201ENST00000362942 107 ntBASIC-0.98□□□□□ -2.57
CHD1O14646 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.98□□□□□ -2.57
CHD1O14646 SNORD83B-201ENST00000386745 93 ntBASIC-0.98□□□□□ -2.57
CHD1O14646 RNA5SP95-201ENST00000410319 137 ntBASIC-0.98□□□□□ -2.57
CHD1O14646 RNU6-607P-201ENST00000411283 108 ntBASIC-0.98□□□□□ -2.57
CHD1O14646 USP9YP29-201ENST00000445112 563 ntBASIC-0.98□□□□□ -2.57
CHD1O14646 AP000542.1-201ENST00000448473 371 ntBASIC-0.98□□□□□ -2.57
CHD1O14646 SNORD38B-202ENST00000625943 69 ntBASIC-0.98□□□□□ -2.57
CHD1O14646 RNU6-777P-201ENST00000364265 104 ntBASIC-0.99□□□□□ -2.57
CHD1O14646 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.99□□□□□ -2.57
CHD1O14646 RNU6-24P-201ENST00000384440 107 ntBASIC-0.99□□□□□ -2.57
CHD1O14646 RNU6-883P-201ENST00000384597 107 ntBASIC-0.99□□□□□ -2.57
CHD1O14646 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.99□□□□□ -2.57
CHD1O14646 MIR1298-201ENST00000408783 112 ntBASIC-0.99□□□□□ -2.57
CHD1O14646 MTCO1P20-201ENST00000425366 358 ntBASIC-0.99□□□□□ -2.57
CHD1O14646 MTND1P26-201ENST00000440488 538 ntBASIC-0.99□□□□□ -2.57
CHD1O14646 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.99□□□□□ -2.57
CHD1O14646 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.99□□□□□ -2.57
CHD1O14646 RPL21P9-201ENST00000556149 474 ntBASIC-0.99□□□□□ -2.57
CHD1O14646 Y_RNA.504-201ENST00000384481 104 ntBASIC-1□□□□□ -2.57
CHD1O14646 SNORA26-201ENST00000391286 122 ntBASIC-1□□□□□ -2.57
CHD1O14646 AC004386.2-201ENST00000441858 148 ntBASIC-1□□□□□ -2.57
CHD1O14646 RNU6-58P-201ENST00000517143 103 ntBASIC-1□□□□□ -2.57
CHD1O14646 AC103996.1-201ENST00000555468 102 ntBASIC-1□□□□□ -2.57
CHD1O14646 AL355375.2-201ENST00000574825 175 ntBASIC-1□□□□□ -2.57
CHD1O14646 RNU4-30P-201ENST00000410245 143 ntBASIC-1.01□□□□□ -2.57
CHD1O14646 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.01□□□□□ -2.57
CHD1O14646 AC114491.1-201ENST00000416095 246 ntBASIC-1.01□□□□□ -2.57
CHD1O14646 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-1.01□□□□□ -2.57
CHD1O14646 AC079781.2-201ENST00000446424 169 ntBASIC-1.01□□□□□ -2.57
CHD1O14646 SPINT5P-201ENST00000448174 155 ntBASIC-1.01□□□□□ -2.57
CHD1O14646 RNU2-56P-201ENST00000516826 190 ntBASIC-1.01□□□□□ -2.57
CHD1O14646 RNU6-341P-201ENST00000516973 96 ntBASIC-1.01□□□□□ -2.57
CHD1O14646 MIR4771-2-201ENST00000577758 74 ntBASIC-1.01□□□□□ -2.57
CHD1O14646 MIR4771-1-201ENST00000582617 74 ntBASIC-1.01□□□□□ -2.57
CHD1O14646 MIR4436A-201ENST00000585278 85 ntBASIC-1.01□□□□□ -2.57
CHD1O14646 RNY4P37-201ENST00000516225 96 ntBASIC-1.01□□□□□ -2.57
CHD1O14646 MIR2115-201ENST00000516657 100 ntBASIC-1.01□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms