Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 MIR4788-201ENST00000639104 80 ntBASIC-0.82□□□□□ -2.54
HMGN4O00479 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.83□□□□□ -2.54
HMGN4O00479 PIGPP3-201ENST00000425307 415 ntBASIC-0.83□□□□□ -2.54
HMGN4O00479 MTND4P32-201ENST00000437189 1237 ntBASIC-0.83□□□□□ -2.54
HMGN4O00479 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-0.83□□□□□ -2.54
HMGN4O00479 AC091951.3-201ENST00000504093 246 ntBASIC-0.83□□□□□ -2.54
HMGN4O00479 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.83□□□□□ -2.54
HMGN4O00479 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.83□□□□□ -2.54
HMGN4O00479 RNU6-685P-201ENST00000517088 95 ntBASIC-0.83□□□□□ -2.54
HMGN4O00479 AC068587.4-201ENST00000533893 186 ntBASIC-0.83□□□□□ -2.54
HMGN4O00479 AC005776.1-201ENST00000603164 290 ntBASIC-0.83□□□□□ -2.54
HMGN4O00479 RNU6-88P-201ENST00000606801 100 ntBASIC-0.83□□□□□ -2.54
HMGN4O00479 AC091304.9-201ENST00000612091 226 ntBASIC-0.83□□□□□ -2.54
HMGN4O00479 AC138649.3-201ENST00000622154 254 ntBASIC-0.83□□□□□ -2.54
HMGN4O00479 SNORD56.2-201ENST00000363242 71 ntBASIC-0.84□□□□□ -2.54
HMGN4O00479 RNU4-84P-201ENST00000364200 139 ntBASIC-0.84□□□□□ -2.54
HMGN4O00479 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.84□□□□□ -2.54
HMGN4O00479 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.84□□□□□ -2.54
HMGN4O00479 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.84□□□□□ -2.54
HMGN4O00479 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.84□□□□□ -2.54
HMGN4O00479 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.84□□□□□ -2.54
HMGN4O00479 RPL21P9-201ENST00000556149 474 ntBASIC-0.84□□□□□ -2.54
HMGN4O00479 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.84□□□□□ -2.54
HMGN4O00479 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.84□□□□□ -2.54
HMGN4O00479 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.84□□□□□ -2.54
HMGN4O00479 AC006504.8-201ENST00000621046 635 ntBASIC-0.84□□□□□ -2.54
HMGN4O00479 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-0.84□□□□□ -2.54
HMGN4O00479 SNORD38B-202ENST00000625943 69 ntBASIC-0.84□□□□□ -2.54
HMGN4O00479 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.85□□□□□ -2.54
HMGN4O00479 SNORD49B-201ENST00000365172 72 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 MIR7-2-201ENST00000384970 110 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 MIR329-1-201ENST00000385028 80 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 MIR802-201ENST00000390235 94 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 RNU6-447P-201ENST00000410293 104 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 RNU6-355P-201ENST00000410427 104 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 RNU6-791P-201ENST00000410467 104 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 RNU6-705P-201ENST00000410601 104 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 RNU6-860P-201ENST00000410860 104 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 RNU6-785P-201ENST00000411324 104 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.85□□□□□ -2.55
HMGN4O00479 MTCO3P19-201ENST00000415864 321 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 MTND1P26-201ENST00000440488 538 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 RNU7-102P-201ENST00000458948 62 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 RNU7-182P-201ENST00000459009 62 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 RNU2-60P-201ENST00000517290 128 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 MTND4LP25-201ENST00000570218 163 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 MIR4263-201ENST00000584745 83 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 U6.90-201ENST00000614007 104 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 U6.70-201ENST00000620287 104 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 AC006435.5-201ENST00000624486 112 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 AL391099.1-201ENST00000624635 187 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 AL162726.3-218ENST00000636401 95 ntBASIC-0.85□□□□□ -2.55
HMGN4O00479 RNU4-9P-201ENST00000364951 139 ntBASIC-0.86□□□□□ -2.55
HMGN4O00479 RNU6-61P-201ENST00000365528 109 ntBASIC-0.86□□□□□ -2.55
HMGN4O00479 RNU6-827P-201ENST00000365553 106 ntBASIC-0.86□□□□□ -2.55
HMGN4O00479 AC117470.1-201ENST00000381974 330 ntBASIC-0.86□□□□□ -2.55
HMGN4O00479 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.86□□□□□ -2.55
HMGN4O00479 BTBD7P2-201ENST00000441962 620 ntBASIC-0.86□□□□□ -2.55
HMGN4O00479 AL353572.1-201ENST00000442490 417 ntBASIC-0.86□□□□□ -2.55
HMGN4O00479 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.86□□□□□ -2.55
HMGN4O00479 SNORD123-201ENST00000459473 70 ntBASIC-0.86□□□□□ -2.55
HMGN4O00479 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.86□□□□□ -2.55
HMGN4O00479 AC097462.1-201ENST00000514125 324 ntBASIC-0.86□□□□□ -2.55
HMGN4O00479 RNU6-201P-201ENST00000517100 61 ntBASIC-0.86□□□□□ -2.55
HMGN4O00479 AC068587.5-201ENST00000528506 175 ntBASIC-0.86□□□□□ -2.55
HMGN4O00479 MIR3152-201ENST00000579801 74 ntBASIC-0.86□□□□□ -2.55
HMGN4O00479 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.86□□□□□ -2.55
HMGN4O00479 MIR6828-201ENST00000636181 60 ntBASIC-0.86□□□□□ -2.55
HMGN4O00479 RNU6-560P-201ENST00000364007 108 ntBASIC-0.87□□□□□ -2.55
HMGN4O00479 RNU6-364P-201ENST00000384387 107 ntBASIC-0.87□□□□□ -2.55
HMGN4O00479 RNU6-298P-201ENST00000390888 96 ntBASIC-0.87□□□□□ -2.55
HMGN4O00479 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.87□□□□□ -2.55
HMGN4O00479 AL512326.2-201ENST00000426359 151 ntBASIC-0.87□□□□□ -2.55
HMGN4O00479 MTCO1P5-201ENST00000433573 344 ntBASIC-0.87□□□□□ -2.55
HMGN4O00479 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.87□□□□□ -2.55
HMGN4O00479 AL031274.1-201ENST00000450334 232 ntBASIC-0.87□□□□□ -2.55
HMGN4O00479 RNU7-172P-201ENST00000517125 64 ntBASIC-0.87□□□□□ -2.55
HMGN4O00479 MIR4493-201ENST00000584016 73 ntBASIC-0.87□□□□□ -2.55
HMGN4O00479 AC121334.2-201ENST00000605387 271 ntBASIC-0.87□□□□□ -2.55
HMGN4O00479 AC131235.4-201ENST00000609288 620 ntBASIC-0.87□□□□□ -2.55
HMGN4O00479 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.88□□□□□ -2.55
HMGN4O00479 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.88□□□□□ -2.55
HMGN4O00479 Y_RNA.578-201ENST00000390903 88 ntBASIC-0.88□□□□□ -2.55
HMGN4O00479 MIR320B2-201ENST00000408479 138 ntBASIC-0.88□□□□□ -2.55
HMGN4O00479 RNU2-39P-201ENST00000410604 198 ntBASIC-0.88□□□□□ -2.55
HMGN4O00479 RNU6-735P-201ENST00000410612 107 ntBASIC-0.88□□□□□ -2.55
HMGN4O00479 AC114755.3-201ENST00000481111 251 ntBASIC-0.88□□□□□ -2.55
HMGN4O00479 AC091133.4-201ENST00000511142 308 ntBASIC-0.88□□□□□ -2.55
HMGN4O00479 RNU6-448P-201ENST00000517052 107 ntBASIC-0.88□□□□□ -2.55
HMGN4O00479 RNU6-897P-201ENST00000517135 105 ntBASIC-0.88□□□□□ -2.55
HMGN4O00479 AL358944.1-201ENST00000528537 144 ntBASIC-0.88□□□□□ -2.55
HMGN4O00479 MIR5589-201ENST00000579442 60 ntBASIC-0.88□□□□□ -2.55
HMGN4O00479 AC087683.1-201ENST00000591187 441 ntBASIC-0.88□□□□□ -2.55
HMGN4O00479 AP000753.3-201ENST00000604083 169 ntBASIC-0.88□□□□□ -2.55
HMGN4O00479 AC006927.2-201ENST00000639256 389 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms