Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RNU2-34P-201ENST00000516534 121 ntBASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 SNORA81.3-201ENST00000517283 198 ntBASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 AC037487.3-201ENST00000606668 112 ntBASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 AL590240.4-201ENST00000616908 390 ntBASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 AC091932.3-201ENST00000624223 323 ntBASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PCDHB1Q9Y5F3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.69□□□□□ -1.98
PCDHB1Q9Y5F3 RNU6-975P-201ENST00000384296 105 ntBASIC2.69□□□□□ -1.98
PCDHB1Q9Y5F3 RNU4-70P-201ENST00000384579 139 ntBASIC2.69□□□□□ -1.98
PCDHB1Q9Y5F3 RNU2-48P-201ENST00000410694 191 ntBASIC2.69□□□□□ -1.98
PCDHB1Q9Y5F3 AC009963.1-201ENST00000417265 157 ntBASIC2.69□□□□□ -1.98
PCDHB1Q9Y5F3 AL513328.1-201ENST00000446460 224 ntBASIC2.69□□□□□ -1.98
PCDHB1Q9Y5F3 MRPS10P1-201ENST00000448483 130 ntBASIC2.69□□□□□ -1.98
PCDHB1Q9Y5F3 RN7SL297P-201ENST00000483161 293 ntBASIC2.69□□□□□ -1.98
PCDHB1Q9Y5F3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.69□□□□□ -1.98
PCDHB1Q9Y5F3 AC093259.1-201ENST00000509755 300 ntBASIC2.69□□□□□ -1.98
PCDHB1Q9Y5F3 SNORD116-28-201ENST00000516123 91 ntBASIC2.69□□□□□ -1.98
PCDHB1Q9Y5F3 RNU1-41P-201ENST00000516161 162 ntBASIC2.69□□□□□ -1.98
PCDHB1Q9Y5F3 RNU1-48P-201ENST00000516400 162 ntBASIC2.69□□□□□ -1.98
PCDHB1Q9Y5F3 AL512605.2-201ENST00000592972 256 ntBASIC2.69□□□□□ -1.98
PCDHB1Q9Y5F3 AC008749.1-201ENST00000597650 306 ntBASIC2.69□□□□□ -1.98
PCDHB1Q9Y5F3 BX284668.6-201ENST00000606899 438 ntBASIC2.69□□□□□ -1.98
PCDHB1Q9Y5F3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.69□□□□□ -1.98
PCDHB1Q9Y5F3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PCDHB1Q9Y5F3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 Y_RNA.101-201ENST00000363154 102 ntBASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 RNU6-743P-201ENST00000364151 106 ntBASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 RNU6-740P-201ENST00000364734 105 ntBASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 Y_RNA.418-201ENST00000384029 102 ntBASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 Y_RNA.569-201ENST00000384749 103 ntBASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 MIR9-1-201ENST00000385198 89 ntBASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 MIR1298-201ENST00000408783 112 ntBASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 RN7SL499P-201ENST00000481141 276 ntBASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 RNU4-71P-201ENST00000516258 113 ntBASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 RNU6-667P-201ENST00000517186 102 ntBASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 AP002001.1-203ENST00000534002 267 ntBASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 RPL21P9-201ENST00000556149 474 ntBASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 AC098479.1-201ENST00000609225 154 ntBASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 AC004792.1-201ENST00000614523 137 ntBASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 snoZ196.1-201ENST00000625269 89 ntBASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.68□□□□□ -1.98
PCDHB1Q9Y5F3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 Y_RNA.44-201ENST00000362676 108 ntBASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 Y_RNA.200-201ENST00000364018 102 ntBASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 RNU6-326P-201ENST00000365480 107 ntBASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 SNORA70B-201ENST00000384210 135 ntBASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 Y_RNA.785-201ENST00000384290 109 ntBASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 AC123900.1-201ENST00000420390 96 ntBASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 AC018868.1-201ENST00000491307 315 ntBASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 RNA5SP76-201ENST00000516277 87 ntBASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 RNU6-155P-201ENST00000516347 100 ntBASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 RNU2-31P-201ENST00000516954 155 ntBASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 NDUFA5P6-201ENST00000542110 379 ntBASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 MIR6817-201ENST00000615588 66 ntBASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
PCDHB1Q9Y5F3 RNA5SP68-201ENST00000363885 119 ntBASIC2.66□□□□□ -1.98
PCDHB1Q9Y5F3 Y_RNA.332-201ENST00000365271 113 ntBASIC2.66□□□□□ -1.98
PCDHB1Q9Y5F3 RNU6-1062P-201ENST00000383908 107 ntBASIC2.66□□□□□ -1.98
PCDHB1Q9Y5F3 MIR592-201ENST00000384959 97 ntBASIC2.66□□□□□ -1.98
PCDHB1Q9Y5F3 RNU6-493P-201ENST00000391321 108 ntBASIC2.66□□□□□ -1.98
PCDHB1Q9Y5F3 SRIP3-201ENST00000413200 219 ntBASIC2.66□□□□□ -1.98
PCDHB1Q9Y5F3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.66□□□□□ -1.98
PCDHB1Q9Y5F3 POLR2KP2-201ENST00000438155 177 ntBASIC2.66□□□□□ -1.98
PCDHB1Q9Y5F3 RNU2-12P-201ENST00000517216 168 ntBASIC2.66□□□□□ -1.98
PCDHB1Q9Y5F3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.66□□□□□ -1.98
PCDHB1Q9Y5F3 MIR3145-201ENST00000580727 82 ntBASIC2.66□□□□□ -1.98
PCDHB1Q9Y5F3 AL590808.1-201ENST00000618696 141 ntBASIC2.66□□□□□ -1.98
PCDHB1Q9Y5F3 FTX_2.1-201ENST00000618816 94 ntBASIC2.66□□□□□ -1.98
PCDHB1Q9Y5F3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.66□□□□□ -1.98
PCDHB1Q9Y5F3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.66□□□□□ -1.98
PCDHB1Q9Y5F3 AL161431.1-201ENST00000618966 4205 ntBASIC2.66□□□□□ -1.98
PCDHB1Q9Y5F3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PCDHB1Q9Y5F3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PCDHB1Q9Y5F3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
PCDHB1Q9Y5F3 SNORA38-201ENST00000363946 132 ntBASIC2.65□□□□□ -1.99
PCDHB1Q9Y5F3 RNU6-454P-201ENST00000364292 107 ntBASIC2.65□□□□□ -1.99
PCDHB1Q9Y5F3 Y_RNA.383-201ENST00000383855 97 ntBASIC2.65□□□□□ -1.99
PCDHB1Q9Y5F3 RNU6-1235P-201ENST00000384559 107 ntBASIC2.65□□□□□ -1.99
PCDHB1Q9Y5F3 RNU6-1199P-201ENST00000411249 104 ntBASIC2.65□□□□□ -1.99
PCDHB1Q9Y5F3 MTCO1P5-201ENST00000433573 344 ntBASIC2.65□□□□□ -1.99
PCDHB1Q9Y5F3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.65□□□□□ -1.99
PCDHB1Q9Y5F3 RPL39P40-201ENST00000445481 146 ntBASIC2.65□□□□□ -1.99
PCDHB1Q9Y5F3 RNU6-498P-201ENST00000459468 107 ntBASIC2.65□□□□□ -1.99
PCDHB1Q9Y5F3 RNU6-221P-201ENST00000459541 99 ntBASIC2.65□□□□□ -1.99
PCDHB1Q9Y5F3 AC091959.1-201ENST00000495857 238 ntBASIC2.65□□□□□ -1.99
PCDHB1Q9Y5F3 RNA5SP148-201ENST00000516527 94 ntBASIC2.65□□□□□ -1.99
PCDHB1Q9Y5F3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.65□□□□□ -1.99
PCDHB1Q9Y5F3 RNU6-182P-201ENST00000516970 105 ntBASIC2.65□□□□□ -1.99
PCDHB1Q9Y5F3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.65□□□□□ -1.99
PCDHB1Q9Y5F3 AC024405.2-202ENST00000532731 184 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms