Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 MTND1P1-201ENST00000445453 368 ntBASIC0.79□□□□□ -2.28
LRRC42Q9Y546 RPS4XP11-201ENST00000446897 772 ntBASIC0.79□□□□□ -2.28
LRRC42Q9Y546 MTND4P18-201ENST00000447010 465 ntBASIC0.79□□□□□ -2.28
LRRC42Q9Y546 HSPE1P13-201ENST00000451143 297 ntBASIC0.79□□□□□ -2.28
LRRC42Q9Y546 AC093303.1-201ENST00000514549 295 ntBASIC0.79□□□□□ -2.28
LRRC42Q9Y546 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.79□□□□□ -2.28
LRRC42Q9Y546 AC019193.3-201ENST00000609144 554 ntBASIC0.79□□□□□ -2.28
LRRC42Q9Y546 MIR6857-201ENST00000613267 93 ntBASIC0.79□□□□□ -2.28
LRRC42Q9Y546 AC073349.3-201ENST00000617616 186 ntBASIC0.79□□□□□ -2.28
LRRC42Q9Y546 AC106754.2-201ENST00000623006 233 ntBASIC0.79□□□□□ -2.28
LRRC42Q9Y546 SNORD3E-202ENST00000627253 216 ntBASIC0.79□□□□□ -2.28
LRRC42Q9Y546 MIR1321-201ENST00000637766 79 ntBASIC0.79□□□□□ -2.28
LRRC42Q9Y546 RNU6-280P-201ENST00000364145 104 ntBASIC0.78□□□□□ -2.28
LRRC42Q9Y546 MIR10B-201ENST00000385011 110 ntBASIC0.78□□□□□ -2.28
LRRC42Q9Y546 RNU6-332P-201ENST00000391193 108 ntBASIC0.78□□□□□ -2.28
LRRC42Q9Y546 MRPS10P1-201ENST00000448483 130 ntBASIC0.78□□□□□ -2.28
LRRC42Q9Y546 SNORD65B-201ENST00000459126 73 ntBASIC0.78□□□□□ -2.28
LRRC42Q9Y546 AP000870.1-201ENST00000472927 406 ntBASIC0.78□□□□□ -2.28
LRRC42Q9Y546 SCARNA16.2-201ENST00000516520 172 ntBASIC0.78□□□□□ -2.28
LRRC42Q9Y546 RNU6-922P-201ENST00000516753 99 ntBASIC0.78□□□□□ -2.28
LRRC42Q9Y546 AC091144.1-201ENST00000519573 138 ntBASIC0.78□□□□□ -2.28
LRRC42Q9Y546 CYCSP23-201ENST00000519781 313 ntBASIC0.78□□□□□ -2.28
LRRC42Q9Y546 AC134698.4-201ENST00000523451 826 ntBASIC0.78□□□□□ -2.28
LRRC42Q9Y546 MIR4438-201ENST00000585271 93 ntBASIC0.78□□□□□ -2.28
LRRC42Q9Y546 AC013244.2-201ENST00000603396 103 ntBASIC0.78□□□□□ -2.28
LRRC42Q9Y546 Y_RNA.140-201ENST00000363474 103 ntBASIC0.77□□□□□ -2.29
LRRC42Q9Y546 Y_RNA.179-201ENST00000363844 90 ntBASIC0.77□□□□□ -2.29
LRRC42Q9Y546 Y_RNA.327-201ENST00000365201 102 ntBASIC0.77□□□□□ -2.29
LRRC42Q9Y546 SNORD116-11-201ENST00000383882 92 ntBASIC0.77□□□□□ -2.29
LRRC42Q9Y546 Y_RNA.533-201ENST00000384596 114 ntBASIC0.77□□□□□ -2.29
LRRC42Q9Y546 RNU6-306P-201ENST00000384617 107 ntBASIC0.77□□□□□ -2.29
LRRC42Q9Y546 Y_RNA.559-201ENST00000384686 107 ntBASIC0.77□□□□□ -2.29
LRRC42Q9Y546 SNORD41-201ENST00000386967 70 ntBASIC0.77□□□□□ -2.29
LRRC42Q9Y546 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.77□□□□□ -2.29
LRRC42Q9Y546 STAG3L5P-204ENST00000443759 179 ntBASIC0.77□□□□□ -2.29
LRRC42Q9Y546 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.77□□□□□ -2.29
LRRC42Q9Y546 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.77□□□□□ -2.29
LRRC42Q9Y546 APOOP3-201ENST00000536787 586 ntBASIC0.77□□□□□ -2.29
LRRC42Q9Y546 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.77□□□□□ -2.29
LRRC42Q9Y546 MIR3942-201ENST00000585264 109 ntBASIC0.77□□□□□ -2.29
LRRC42Q9Y546 AC104984.5-201ENST00000586878 94 ntBASIC0.77□□□□□ -2.29
LRRC42Q9Y546 AL513534.2-201ENST00000603836 250 ntBASIC0.77□□□□□ -2.29
LRRC42Q9Y546 AL020996.3-201ENST00000606617 222 ntBASIC0.77□□□□□ -2.29
LRRC42Q9Y546 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.77□□□□□ -2.29
LRRC42Q9Y546 AC018630.2-201ENST00000534866 2403 ntBASIC0.77□□□□□ -2.29
LRRC42Q9Y546 Y_RNA.41-201ENST00000362646 102 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 RNU5F-3P-201ENST00000363767 117 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 Y_RNA.184-201ENST00000363884 108 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 RNA5SP99-201ENST00000364020 114 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 RNU6-1090P-201ENST00000364065 94 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 RNU4-76P-201ENST00000364509 141 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 SNORD116-2-201ENST00000384274 95 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 SNORD116-6-201ENST00000384711 96 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 MIR532-201ENST00000385025 91 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 RNU7-94P-201ENST00000459576 63 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 SNORA31.2-201ENST00000516019 134 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 MTND2P38-201ENST00000522536 667 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 AC023157.2-201ENST00000540596 141 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 MIR4778-201ENST00000577635 80 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 AL162424.1-201ENST00000602325 221 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 FAM71BP1-201ENST00000604431 523 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 AC090617.10-201ENST00000624308 134 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 AC006435.5-201ENST00000624486 112 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 AC024614.3-201ENST00000637860 256 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 AC068137.4-201ENST00000638485 296 ntBASIC0.76□□□□□ -2.29
LRRC42Q9Y546 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
LRRC42Q9Y546 MIR222-201ENST00000384992 110 ntBASIC0.75□□□□□ -2.29
LRRC42Q9Y546 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.75□□□□□ -2.29
LRRC42Q9Y546 AC048334.1-201ENST00000477975 159 ntBASIC0.75□□□□□ -2.29
LRRC42Q9Y546 RPS27P22-201ENST00000478056 241 ntBASIC0.75□□□□□ -2.29
LRRC42Q9Y546 AC105758.1-201ENST00000506038 399 ntBASIC0.75□□□□□ -2.29
LRRC42Q9Y546 RN7SKP49-201ENST00000516675 260 ntBASIC0.75□□□□□ -2.29
LRRC42Q9Y546 SNORA70.22-201ENST00000517160 124 ntBASIC0.75□□□□□ -2.29
LRRC42Q9Y546 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.75□□□□□ -2.29
LRRC42Q9Y546 AC027419.1-201ENST00000522976 328 ntBASIC0.75□□□□□ -2.29
LRRC42Q9Y546 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.75□□□□□ -2.29
LRRC42Q9Y546 GHRLOS.1-201ENST00000610995 70 ntBASIC0.75□□□□□ -2.29
LRRC42Q9Y546 AC010999.1-201ENST00000611856 324 ntBASIC0.75□□□□□ -2.29
LRRC42Q9Y546 AL133216.2-202ENST00000634512 349 ntBASIC0.75□□□□□ -2.29
LRRC42Q9Y546 MIR6079-201ENST00000635807 62 ntBASIC0.75□□□□□ -2.29
LRRC42Q9Y546 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
LRRC42Q9Y546 AC008163.1-202ENST00000636004 2889 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 ZNF299P-201ENST00000406845 1804 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 RNU4-79P-201ENST00000362764 141 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 RNU6-596P-201ENST00000365395 98 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 Y_RNA.405-201ENST00000383979 100 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 Y_RNA.451-201ENST00000384200 100 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 RNU6-424P-201ENST00000384367 105 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 Y_RNA.524-201ENST00000384564 100 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 Y_RNA.561-201ENST00000384694 100 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 MIR19B1-201ENST00000384829 87 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 MIR653-201ENST00000385279 96 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 RNU6-1054P-201ENST00000411293 104 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 MTND3P23-201ENST00000431980 347 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 MTCO2P7-201ENST00000446518 666 ntBASIC0.74□□□□□ -2.29
LRRC42Q9Y546 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.74□□□□□ -2.29
LRRC42Q9Y546 AC010469.2-201ENST00000496412 480 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms