Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AC006435.5-201ENST00000624486 112 ntBASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 CTSLP2-204ENST00000629029 392 ntBASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 U6.115-201ENST00000636045 103 ntBASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 MIR203B-201ENST00000636080 86 ntBASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 MIR338-201ENST00000636369 67 ntBASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.98□□□□□ -2.09
LSM4Q9Y4Z0 snoU2-30.2-201ENST00000362805 70 ntBASIC1.97□□□□□ -2.09
LSM4Q9Y4Z0 Y_RNA.101-201ENST00000363154 102 ntBASIC1.97□□□□□ -2.09
LSM4Q9Y4Z0 Y_RNA.143-201ENST00000363520 106 ntBASIC1.97□□□□□ -2.09
LSM4Q9Y4Z0 MIR606-201ENST00000384851 96 ntBASIC1.97□□□□□ -2.09
LSM4Q9Y4Z0 SNORA48.1-201ENST00000390879 135 ntBASIC1.97□□□□□ -2.09
LSM4Q9Y4Z0 RNU2-54P-201ENST00000410299 190 ntBASIC1.97□□□□□ -2.09
LSM4Q9Y4Z0 AC009963.1-201ENST00000417265 157 ntBASIC1.97□□□□□ -2.09
LSM4Q9Y4Z0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.97□□□□□ -2.09
LSM4Q9Y4Z0 HMGN2P34-201ENST00000437647 269 ntBASIC1.97□□□□□ -2.09
LSM4Q9Y4Z0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.97□□□□□ -2.09
LSM4Q9Y4Z0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.97□□□□□ -2.09
LSM4Q9Y4Z0 RNU6-897P-201ENST00000517135 105 ntBASIC1.97□□□□□ -2.09
LSM4Q9Y4Z0 RNU2-12P-201ENST00000517216 168 ntBASIC1.97□□□□□ -2.09
LSM4Q9Y4Z0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.97□□□□□ -2.09
LSM4Q9Y4Z0 AC005828.6-201ENST00000606610 232 ntBASIC1.97□□□□□ -2.09
LSM4Q9Y4Z0 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.97□□□□□ -2.09
LSM4Q9Y4Z0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 RNU6-862P-201ENST00000362804 105 ntBASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 Y_RNA.152-201ENST00000363578 100 ntBASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 SNORA16B-201ENST00000364674 135 ntBASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 Y_RNA.276-201ENST00000364732 109 ntBASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 Y_RNA.287-201ENST00000364853 94 ntBASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 Y_RNA.570-201ENST00000384750 101 ntBASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 RNA5SP501-201ENST00000410990 112 ntBASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 CST2P1-201ENST00000425770 87 ntBASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 AC099677.2-201ENST00000436385 175 ntBASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 RNU6-237P-201ENST00000515985 71 ntBASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 AC006380.1-201ENST00000603598 186 ntBASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 RAC1P9-201ENST00000604990 392 ntBASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 AL353621.2-201ENST00000605340 133 ntBASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 ZNF658B-202ENST00000615961 3375 ntBASIC1.96□□□□□ -2.1
LSM4Q9Y4Z0 AC245060.5-201ENST00000610778 3293 ntBASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 SNORD114-7-201ENST00000362520 77 ntBASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 U8.2-201ENST00000363156 134 ntBASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 Y_RNA.153-201ENST00000363615 91 ntBASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 SNORA63C-201ENST00000364578 129 ntBASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 RNU6-1175P-201ENST00000365200 107 ntBASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 Y_RNA.446-201ENST00000384178 104 ntBASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 SNORA20B-201ENST00000384220 132 ntBASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 AL355796.1-201ENST00000406706 323 ntBASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 SNORA3.2-201ENST00000408221 125 ntBASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 SNORA11.4-201ENST00000408823 129 ntBASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 RNU6-1199P-201ENST00000411249 104 ntBASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 RPL23AP36-201ENST00000413895 458 ntBASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 AC096920.1-201ENST00000423991 241 ntBASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 snoU13.26-201ENST00000459452 105 ntBASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 AL137100.2-201ENST00000555786 315 ntBASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 AL049779.4-201ENST00000604500 156 ntBASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 AC008555.8-201ENST00000623602 2168 ntBASIC1.95□□□□□ -2.1
LSM4Q9Y4Z0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 MIR21-201ENST00000362134 72 ntBASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 RNU6-770P-201ENST00000363929 105 ntBASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 RNU1-96P-201ENST00000364163 162 ntBASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 Y_RNA.214-201ENST00000364201 112 ntBASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 RNU6-937P-201ENST00000384325 106 ntBASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 RNU6-738P-201ENST00000384531 106 ntBASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 RNU6-417P-201ENST00000384712 107 ntBASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 MIR515-2-201ENST00000384883 83 ntBASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 MIR515-1-201ENST00000384884 83 ntBASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 AC113618.1-201ENST00000416747 285 ntBASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 snoU13.15-201ENST00000459407 104 ntBASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 RNU6-397P-201ENST00000516226 104 ntBASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 RNVU1-2-201ENST00000516326 135 ntBASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 SNORA31.11-201ENST00000516528 139 ntBASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 RNU6-1046P-201ENST00000516538 107 ntBASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 AC131281.1-201ENST00000522984 164 ntBASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 AC011373.1-201ENST00000607270 237 ntBASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 MIR7843-201ENST00000622274 79 ntBASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 ZNF702P-202ENST00000434269 1966 ntBASIC1.94□□□□□ -2.1
LSM4Q9Y4Z0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 CENPCP1-201ENST00000533085 2578 ntBASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 Y_RNA.145-201ENST00000363527 102 ntBASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 SNORD115-30-201ENST00000364117 82 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms