Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 RNU6-640P-201ENST00000363693 105 ntBASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 Y_RNA.198-201ENST00000364013 98 ntBASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 RNA5SP139-201ENST00000364340 117 ntBASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 Y_RNA.332-201ENST00000365271 113 ntBASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 Y_RNA.558-201ENST00000384685 113 ntBASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 SNORD77.3-201ENST00000391113 65 ntBASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 RNU6-1186P-201ENST00000410429 97 ntBASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 HMGN2P32-201ENST00000444648 269 ntBASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 RPS26P48-201ENST00000491713 339 ntBASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 RNU6-970P-201ENST00000516312 107 ntBASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 SCARNA15-202ENST00000516881 127 ntBASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 RNA5SP143-201ENST00000516936 115 ntBASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 SCARNA3-201ENST00000517097 143 ntBASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 RNU6-711P-201ENST00000517255 106 ntBASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 AL353746.1-201ENST00000566293 6881 ntBASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGC3Q9UN70 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 RNU1-18P-201ENST00000363062 164 ntBASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 Y_RNA.213-201ENST00000364178 111 ntBASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 Y_RNA.549-201ENST00000384657 102 ntBASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 EDDM3CP-201ENST00000415977 425 ntBASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 AL161788.1-201ENST00000441805 169 ntBASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 AC106707.2-201ENST00000484182 374 ntBASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 AC011406.1-201ENST00000512440 370 ntBASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 Y_RNA.666-201ENST00000516187 112 ntBASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 TOMM20P2-201ENST00000540082 421 ntBASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 MIR5187-201ENST00000583479 76 ntBASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 AC110741.2-201ENST00000605278 268 ntBASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 AL359075.3-201ENST00000613288 217 ntBASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 AC068647.1-201ENST00000489539 2265 ntBASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHGC3Q9UN70 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHGC3Q9UN70 Y_RNA.410-201ENST00000383992 113 ntBASIC3.96□□□□□ -1.78
PCDHGC3Q9UN70 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PCDHGC3Q9UN70 RPS29P7-201ENST00000439662 171 ntBASIC3.96□□□□□ -1.78
PCDHGC3Q9UN70 RPL39P34-201ENST00000477141 156 ntBASIC3.96□□□□□ -1.78
PCDHGC3Q9UN70 CKS1BP2-201ENST00000497342 240 ntBASIC3.96□□□□□ -1.78
PCDHGC3Q9UN70 PHBP14-201ENST00000512887 367 ntBASIC3.96□□□□□ -1.78
PCDHGC3Q9UN70 RNU6-341P-201ENST00000516973 96 ntBASIC3.96□□□□□ -1.78
PCDHGC3Q9UN70 AC068657.1-201ENST00000520807 306 ntBASIC3.96□□□□□ -1.78
PCDHGC3Q9UN70 MIR5685-201ENST00000579080 79 ntBASIC3.96□□□□□ -1.78
PCDHGC3Q9UN70 MIR5197-201ENST00000583721 112 ntBASIC3.96□□□□□ -1.78
PCDHGC3Q9UN70 VN1R85P-201ENST00000601587 426 ntBASIC3.96□□□□□ -1.78
PCDHGC3Q9UN70 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.96□□□□□ -1.78
PCDHGC3Q9UN70 AC110079.1-202ENST00000635213 138 ntBASIC3.96□□□□□ -1.78
PCDHGC3Q9UN70 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHGC3Q9UN70 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PCDHGC3Q9UN70 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHGC3Q9UN70 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHGC3Q9UN70 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHGC3Q9UN70 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGC3Q9UN70 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PCDHGC3Q9UN70 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PCDHGC3Q9UN70 ZNF271P-202ENST00000465539 1970 ntBASIC3.95□□□□□ -1.78
PCDHGC3Q9UN70 AL138878.1-201ENST00000405131 347 ntBASIC3.95□□□□□ -1.78
PCDHGC3Q9UN70 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHGC3Q9UN70 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHGC3Q9UN70 MIR4644-201ENST00000579929 84 ntBASIC3.95□□□□□ -1.78
PCDHGC3Q9UN70 AC012531.5-201ENST00000611375 151 ntBASIC3.95□□□□□ -1.78
PCDHGC3Q9UN70 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGC3Q9UN70 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHGC3Q9UN70 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 snoU2-30.2-201ENST00000362805 70 ntBASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 SNORA63.5-201ENST00000363548 123 ntBASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 MIR802-201ENST00000390235 94 ntBASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 SNORA26.2-201ENST00000390922 122 ntBASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 AL590004.2-201ENST00000404787 371 ntBASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 AC060773.1-201ENST00000421698 310 ntBASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 HMGN2P7-201ENST00000456186 273 ntBASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 RN7SKP83-201ENST00000516512 178 ntBASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 AC134878.1-201ENST00000619901 243 ntBASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGC3Q9UN70 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGC3Q9UN70 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGC3Q9UN70 MIR126-201ENST00000362291 85 ntBASIC3.93□□□□□ -1.78
PCDHGC3Q9UN70 RNU6-743P-201ENST00000364151 106 ntBASIC3.93□□□□□ -1.78
PCDHGC3Q9UN70 SNORA57.1-201ENST00000391227 145 ntBASIC3.93□□□□□ -1.78
PCDHGC3Q9UN70 AC244505.4-201ENST00000434905 287 ntBASIC3.93□□□□□ -1.78
PCDHGC3Q9UN70 SSXP5-201ENST00000443473 287 ntBASIC3.93□□□□□ -1.78
PCDHGC3Q9UN70 IGKV3-31-201ENST00000523109 329 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms