Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 PCNPP5-201ENST00000452246 481 ntBASIC2.62□□□□□ -1.99
HDAC9Q9UKV0 MRPS35P2-201ENST00000508242 191 ntBASIC2.62□□□□□ -1.99
HDAC9Q9UKV0 SNORA4.4-201ENST00000515921 135 ntBASIC2.62□□□□□ -1.99
HDAC9Q9UKV0 CYCSP23-201ENST00000519781 313 ntBASIC2.62□□□□□ -1.99
HDAC9Q9UKV0 RRN3P3-201ENST00000549207 578 ntBASIC2.62□□□□□ -1.99
HDAC9Q9UKV0 AC233702.2-202ENST00000562547 291 ntBASIC2.62□□□□□ -1.99
HDAC9Q9UKV0 MIR4529-201ENST00000578110 78 ntBASIC2.62□□□□□ -1.99
HDAC9Q9UKV0 AL162730.1-201ENST00000605734 292 ntBASIC2.62□□□□□ -1.99
HDAC9Q9UKV0 AC068205.3-201ENST00000636385 468 ntBASIC2.62□□□□□ -1.99
HDAC9Q9UKV0 AC131280.1-202ENST00000624067 4211 ntBASIC2.62□□□□□ -1.99
HDAC9Q9UKV0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
HDAC9Q9UKV0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
HDAC9Q9UKV0 Y_RNA.210-201ENST00000364161 110 ntBASIC2.61□□□□□ -1.99
HDAC9Q9UKV0 MIR144-201ENST00000384886 86 ntBASIC2.61□□□□□ -1.99
HDAC9Q9UKV0 MIR518E-201ENST00000385252 88 ntBASIC2.61□□□□□ -1.99
HDAC9Q9UKV0 SNORA40.19-201ENST00000390846 128 ntBASIC2.61□□□□□ -1.99
HDAC9Q9UKV0 RPL21P1-201ENST00000399532 476 ntBASIC2.61□□□□□ -1.99
HDAC9Q9UKV0 AL033519.2-201ENST00000403958 392 ntBASIC2.61□□□□□ -1.99
HDAC9Q9UKV0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.61□□□□□ -1.99
HDAC9Q9UKV0 CYCSP49-201ENST00000420810 319 ntBASIC2.61□□□□□ -1.99
HDAC9Q9UKV0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.61□□□□□ -1.99
HDAC9Q9UKV0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.61□□□□□ -1.99
HDAC9Q9UKV0 RNU7-14P-201ENST00000459331 62 ntBASIC2.61□□□□□ -1.99
HDAC9Q9UKV0 RNU6-397P-201ENST00000516226 104 ntBASIC2.61□□□□□ -1.99
HDAC9Q9UKV0 RNU2-19P-201ENST00000517288 84 ntBASIC2.61□□□□□ -1.99
HDAC9Q9UKV0 PRELID2P1-201ENST00000552837 301 ntBASIC2.61□□□□□ -1.99
HDAC9Q9UKV0 AC026271.5-201ENST00000577873 130 ntBASIC2.61□□□□□ -1.99
HDAC9Q9UKV0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.61□□□□□ -1.99
HDAC9Q9UKV0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HDAC9Q9UKV0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HDAC9Q9UKV0 RNU6-961P-201ENST00000363893 105 ntBASIC2.6□□□□□ -1.99
HDAC9Q9UKV0 SNORD87-201ENST00000364849 89 ntBASIC2.6□□□□□ -1.99
HDAC9Q9UKV0 ELOCP20-201ENST00000422460 345 ntBASIC2.6□□□□□ -1.99
HDAC9Q9UKV0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.6□□□□□ -1.99
HDAC9Q9UKV0 AC055731.1-201ENST00000474387 401 ntBASIC2.6□□□□□ -1.99
HDAC9Q9UKV0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.6□□□□□ -1.99
HDAC9Q9UKV0 AC074133.1-201ENST00000515696 183 ntBASIC2.6□□□□□ -1.99
HDAC9Q9UKV0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.6□□□□□ -1.99
HDAC9Q9UKV0 RNU6-897P-201ENST00000517135 105 ntBASIC2.6□□□□□ -1.99
HDAC9Q9UKV0 AC121758.2-201ENST00000553271 193 ntBASIC2.6□□□□□ -1.99
HDAC9Q9UKV0 AL137847.3-201ENST00000611521 109 ntBASIC2.6□□□□□ -1.99
HDAC9Q9UKV0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.6□□□□□ -1.99
HDAC9Q9UKV0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
HDAC9Q9UKV0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.6□□□□□ -1.99
HDAC9Q9UKV0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HDAC9Q9UKV0 MIR378A-201ENST00000362177 66 ntBASIC2.59□□□□□ -1.99
HDAC9Q9UKV0 RNU6-545P-201ENST00000362681 104 ntBASIC2.59□□□□□ -1.99
HDAC9Q9UKV0 RNU6-1309P-201ENST00000363305 108 ntBASIC2.59□□□□□ -1.99
HDAC9Q9UKV0 Y_RNA.214-201ENST00000364201 112 ntBASIC2.59□□□□□ -1.99
HDAC9Q9UKV0 SNORD31B-201ENST00000364977 69 ntBASIC2.59□□□□□ -1.99
HDAC9Q9UKV0 SNORA25.9-201ENST00000365087 128 ntBASIC2.59□□□□□ -1.99
HDAC9Q9UKV0 MIR583-201ENST00000384846 75 ntBASIC2.59□□□□□ -1.99
HDAC9Q9UKV0 MIR586-201ENST00000385035 97 ntBASIC2.59□□□□□ -1.99
HDAC9Q9UKV0 SNORA48.3-201ENST00000391081 134 ntBASIC2.59□□□□□ -1.99
HDAC9Q9UKV0 UQCRBP2-201ENST00000447827 297 ntBASIC2.59□□□□□ -1.99
HDAC9Q9UKV0 HMGN2P9-201ENST00000476875 229 ntBASIC2.59□□□□□ -1.99
HDAC9Q9UKV0 RNU1-117P-201ENST00000517041 158 ntBASIC2.59□□□□□ -1.99
HDAC9Q9UKV0 RNU6-667P-201ENST00000517186 102 ntBASIC2.59□□□□□ -1.99
HDAC9Q9UKV0 AC018448.1-201ENST00000552843 316 ntBASIC2.59□□□□□ -1.99
HDAC9Q9UKV0 MIR6845-201ENST00000613182 61 ntBASIC2.59□□□□□ -1.99
HDAC9Q9UKV0 MIR8070-201ENST00000616510 88 ntBASIC2.59□□□□□ -1.99
HDAC9Q9UKV0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.59□□□□□ -2
HDAC9Q9UKV0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
HDAC9Q9UKV0 Y_RNA.105-201ENST00000363182 111 ntBASIC2.58□□□□□ -2
HDAC9Q9UKV0 Y_RNA.183-201ENST00000363882 113 ntBASIC2.58□□□□□ -2
HDAC9Q9UKV0 Y_RNA.439-201ENST00000384119 94 ntBASIC2.58□□□□□ -2
HDAC9Q9UKV0 RNU6-1109P-201ENST00000391187 107 ntBASIC2.58□□□□□ -2
HDAC9Q9UKV0 HMGN2P39-201ENST00000398005 273 ntBASIC2.58□□□□□ -2
HDAC9Q9UKV0 MIR1283-1-201ENST00000408494 87 ntBASIC2.58□□□□□ -2
HDAC9Q9UKV0 CR769767.1-201ENST00000436337 346 ntBASIC2.58□□□□□ -2
HDAC9Q9UKV0 MTND3P2-201ENST00000438452 342 ntBASIC2.58□□□□□ -2
HDAC9Q9UKV0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.58□□□□□ -2
HDAC9Q9UKV0 HMGN2P18-201ENST00000450680 270 ntBASIC2.58□□□□□ -2
HDAC9Q9UKV0 AC016925.1-201ENST00000458303 298 ntBASIC2.58□□□□□ -2
HDAC9Q9UKV0 Y_RNA.713-201ENST00000517013 96 ntBASIC2.58□□□□□ -2
HDAC9Q9UKV0 RNA5SP402-201ENST00000517148 110 ntBASIC2.58□□□□□ -2
HDAC9Q9UKV0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.58□□□□□ -2
HDAC9Q9UKV0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.58□□□□□ -2
HDAC9Q9UKV0 AC136932.1-201ENST00000574771 208 ntBASIC2.58□□□□□ -2
HDAC9Q9UKV0 AC007229.1-201ENST00000590455 412 ntBASIC2.58□□□□□ -2
HDAC9Q9UKV0 PRR13P7-201ENST00000605538 430 ntBASIC2.58□□□□□ -2
HDAC9Q9UKV0 Y_RNA.772-201ENST00000606692 102 ntBASIC2.58□□□□□ -2
HDAC9Q9UKV0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.58□□□□□ -2
HDAC9Q9UKV0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.57□□□□□ -2
HDAC9Q9UKV0 Y_RNA.116-201ENST00000363292 103 ntBASIC2.57□□□□□ -2
HDAC9Q9UKV0 Y_RNA.152-201ENST00000363578 100 ntBASIC2.57□□□□□ -2
HDAC9Q9UKV0 MIR300-201ENST00000401138 83 ntBASIC2.57□□□□□ -2
HDAC9Q9UKV0 RNU6-121P-201ENST00000410525 99 ntBASIC2.57□□□□□ -2
HDAC9Q9UKV0 RNU6-321P-201ENST00000410912 106 ntBASIC2.57□□□□□ -2
HDAC9Q9UKV0 AL445646.1-201ENST00000431784 216 ntBASIC2.57□□□□□ -2
HDAC9Q9UKV0 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.57□□□□□ -2
HDAC9Q9UKV0 NDUFB4P10-201ENST00000452541 359 ntBASIC2.57□□□□□ -2
HDAC9Q9UKV0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.57□□□□□ -2
HDAC9Q9UKV0 RNU6-625P-201ENST00000459412 107 ntBASIC2.57□□□□□ -2
HDAC9Q9UKV0 RNU6-408P-201ENST00000515910 100 ntBASIC2.57□□□□□ -2
HDAC9Q9UKV0 RNA5SP490-201ENST00000517141 136 ntBASIC2.57□□□□□ -2
HDAC9Q9UKV0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.57□□□□□ -2
HDAC9Q9UKV0 IGLV3-17-201ENST00000519099 244 ntBASIC2.57□□□□□ -2
HDAC9Q9UKV0 AP002001.1-203ENST00000534002 267 ntBASIC2.57□□□□□ -2
HDAC9Q9UKV0 MIR4423-201ENST00000580922 80 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms