Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 AC027124.2-201ENST00000428249 105 ntBASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 AC007395.1-201ENST00000451333 677 ntBASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 RPS29P21-201ENST00000496272 170 ntBASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-1338P-201ENST00000516328 91 ntBASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-111P-201ENST00000517179 105 ntBASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-667P-201ENST00000517186 102 ntBASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 AP002001.1-203ENST00000534002 267 ntBASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 AC121758.2-201ENST00000553271 193 ntBASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 AL109918.3-201ENST00000603072 338 ntBASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 AC005562.2-201ENST00000618264 111 ntBASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.37□□□□□ -2.03
NCKIPSDQ9NZQ3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 RNA5SP289-201ENST00000362332 137 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU5F-3P-201ENST00000363767 117 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 Y_RNA.179-201ENST00000363844 90 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-793P-201ENST00000384233 104 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 MIR144-201ENST00000384886 86 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 AL603908.1-201ENST00000406098 201 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 ELOCP21-201ENST00000412558 336 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 IFNA11P-201ENST00000446352 526 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 snoU13.15-201ENST00000459407 104 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 SNORA4.4-201ENST00000515921 135 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-966P-201ENST00000516479 104 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 Y_RNA.683-201ENST00000516508 93 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 DEFB108E-201ENST00000524692 240 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 AK6P2-201ENST00000549020 471 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 MIR3126-201ENST00000577443 74 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 AC009779.6-201ENST00000603972 165 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 AC103810.6-201ENST00000606708 136 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 BX284668.6-201ENST00000606899 438 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 AC098479.1-201ENST00000609225 154 ntBASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NCKIPSDQ9NZQ3 AC092881.1-201ENST00000638218 2733 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 Y_RNA.16-201ENST00000362421 102 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU4-90P-201ENST00000362773 141 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 Y_RNA.117-201ENST00000363294 101 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 SNORD113-8-201ENST00000363497 74 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 RNY1-201ENST00000364228 113 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 Y_RNA.286-201ENST00000364813 102 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 Y_RNA.415-201ENST00000384012 112 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-209P-201ENST00000384118 107 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 Y_RNA.541-201ENST00000384640 113 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 MIR320B2-201ENST00000408479 138 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 RN7SKP223-201ENST00000410582 62 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU5A-5P-201ENST00000411054 116 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 AC004386.2-201ENST00000441858 148 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 HSPE1P25-201ENST00000455484 251 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 HMGB3P17-201ENST00000504195 649 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU4-71P-201ENST00000516258 113 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-182P-201ENST00000516970 105 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 MIR7843-201ENST00000622274 79 ntBASIC2.35□□□□□ -2.03
NCKIPSDQ9NZQ3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU1-62P-201ENST00000362599 164 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 SNORD27-201ENST00000363981 72 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-290P-201ENST00000365212 101 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-234P-201ENST00000365229 104 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-338P-201ENST00000383888 105 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-20P-201ENST00000384106 107 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 Y_RNA.539-201ENST00000384635 107 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 Y_RNA.570-201ENST00000384750 101 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 AL033519.2-201ENST00000403958 392 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 AL603910.2-201ENST00000407268 136 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 Y_RNA.595-201ENST00000410403 105 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 Y_RNA.602-201ENST00000410535 92 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 AL390729.2-201ENST00000416137 156 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 AC018868.1-201ENST00000491307 315 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-138P-201ENST00000515952 107 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU6-496P-201ENST00000516145 99 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 RNU5F-4P-201ENST00000516581 114 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 AC026470.2-201ENST00000561492 181 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 AC233702.2-202ENST00000562547 291 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 SNRPGP20-201ENST00000604477 205 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.34□□□□□ -2.03
NCKIPSDQ9NZQ3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.04
NCKIPSDQ9NZQ3 MIRLET7G-201ENST00000362280 84 ntBASIC2.33□□□□□ -2.04
NCKIPSDQ9NZQ3 RNU6-626P-201ENST00000363354 107 ntBASIC2.33□□□□□ -2.04
NCKIPSDQ9NZQ3 SNORD87-201ENST00000364849 89 ntBASIC2.33□□□□□ -2.04
NCKIPSDQ9NZQ3 SNORA67.2-201ENST00000384300 149 ntBASIC2.33□□□□□ -2.04
NCKIPSDQ9NZQ3 RNU4-30P-201ENST00000410245 143 ntBASIC2.33□□□□□ -2.04
NCKIPSDQ9NZQ3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms