Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 SUB1P3-201ENST00000564581 315 ntBASIC1.55□□□□□ -2.16
CHCHD3Q9NX63 AC125232.2-201ENST00000592457 143 ntBASIC1.55□□□□□ -2.16
CHCHD3Q9NX63 AL162424.1-201ENST00000602325 221 ntBASIC1.55□□□□□ -2.16
CHCHD3Q9NX63 AC080078.3-201ENST00000605407 463 ntBASIC1.55□□□□□ -2.16
CHCHD3Q9NX63 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 AC006026.1-201ENST00000444025 1803 ntBASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 Y_RNA.48-201ENST00000362710 103 ntBASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 SNORA33-201ENST00000363664 130 ntBASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 RNU6-1145P-201ENST00000384246 107 ntBASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 RNU6-1065P-201ENST00000384513 106 ntBASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 MIR194-1-201ENST00000384892 85 ntBASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 RNU2-2P-201ENST00000410396 191 ntBASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 RN7SKP200-201ENST00000410564 320 ntBASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 RNU6-1001P-201ENST00000411265 100 ntBASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 RPS26P55-201ENST00000471178 356 ntBASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 AC103851.1-201ENST00000506833 274 ntBASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 PRDX4P1-201ENST00000507189 574 ntBASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 AC015688.6-201ENST00000577737 104 ntBASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 TPTEP1-208ENST00000636884 213 ntBASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 AP000648.3-201ENST00000623539 4507 ntBASIC1.54□□□□□ -2.16
CHCHD3Q9NX63 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.53□□□□□ -2.16
CHCHD3Q9NX63 RNU6-271P-201ENST00000363858 105 ntBASIC1.53□□□□□ -2.16
CHCHD3Q9NX63 SNORA26.9-201ENST00000391322 122 ntBASIC1.53□□□□□ -2.16
CHCHD3Q9NX63 MTCO3P19-201ENST00000415864 321 ntBASIC1.53□□□□□ -2.16
CHCHD3Q9NX63 RPL23AP50-201ENST00000434149 455 ntBASIC1.53□□□□□ -2.16
CHCHD3Q9NX63 AC007677.1-201ENST00000445757 515 ntBASIC1.53□□□□□ -2.16
CHCHD3Q9NX63 MRPS10P1-201ENST00000448483 130 ntBASIC1.53□□□□□ -2.16
CHCHD3Q9NX63 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.53□□□□□ -2.16
CHCHD3Q9NX63 RNU7-34P-201ENST00000459394 64 ntBASIC1.53□□□□□ -2.16
CHCHD3Q9NX63 RPL7P42-201ENST00000481005 679 ntBASIC1.53□□□□□ -2.16
CHCHD3Q9NX63 AC079140.2-201ENST00000506193 142 ntBASIC1.53□□□□□ -2.16
CHCHD3Q9NX63 RNU6-107P-201ENST00000516643 102 ntBASIC1.53□□□□□ -2.16
CHCHD3Q9NX63 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.53□□□□□ -2.16
CHCHD3Q9NX63 MIR5690-201ENST00000583739 73 ntBASIC1.53□□□□□ -2.16
CHCHD3Q9NX63 AP001485.1-201ENST00000604799 199 ntBASIC1.53□□□□□ -2.16
CHCHD3Q9NX63 AC133104.2-201ENST00000615272 193 ntBASIC1.53□□□□□ -2.16
CHCHD3Q9NX63 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.53□□□□□ -2.17
CHCHD3Q9NX63 SNORD26-201ENST00000384147 75 ntBASIC1.52□□□□□ -2.17
CHCHD3Q9NX63 Y_RNA.577-201ENST00000384794 101 ntBASIC1.52□□□□□ -2.17
CHCHD3Q9NX63 RPL21P1-201ENST00000399532 476 ntBASIC1.52□□□□□ -2.17
CHCHD3Q9NX63 AL079342.1-201ENST00000401460 267 ntBASIC1.52□□□□□ -2.17
CHCHD3Q9NX63 AC004965.1-201ENST00000413033 213 ntBASIC1.52□□□□□ -2.17
CHCHD3Q9NX63 AL353997.1-201ENST00000432936 108 ntBASIC1.52□□□□□ -2.17
CHCHD3Q9NX63 AC027119.1-201ENST00000440877 241 ntBASIC1.52□□□□□ -2.17
CHCHD3Q9NX63 PCNPP5-201ENST00000452246 481 ntBASIC1.52□□□□□ -2.17
CHCHD3Q9NX63 SNORD65B-201ENST00000459126 73 ntBASIC1.52□□□□□ -2.17
CHCHD3Q9NX63 RNU7-87P-201ENST00000459343 62 ntBASIC1.52□□□□□ -2.17
CHCHD3Q9NX63 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.52□□□□□ -2.17
CHCHD3Q9NX63 MIR4438-201ENST00000585271 93 ntBASIC1.52□□□□□ -2.17
CHCHD3Q9NX63 AL121890.5-201ENST00000620848 304 ntBASIC1.52□□□□□ -2.17
CHCHD3Q9NX63 MIR8063-201ENST00000621930 81 ntBASIC1.52□□□□□ -2.17
CHCHD3Q9NX63 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.52□□□□□ -2.17
CHCHD3Q9NX63 AL669831.3-213ENST00000636676 183 ntBASIC1.52□□□□□ -2.17
CHCHD3Q9NX63 U6.108-201ENST00000637764 58 ntBASIC1.52□□□□□ -2.17
CHCHD3Q9NX63 MIR26B-201ENST00000362251 77 ntBASIC1.51□□□□□ -2.17
CHCHD3Q9NX63 SNORD114-7-201ENST00000362520 77 ntBASIC1.51□□□□□ -2.17
CHCHD3Q9NX63 RNU6-879P-201ENST00000364328 108 ntBASIC1.51□□□□□ -2.17
CHCHD3Q9NX63 SNORD1A-201ENST00000364968 72 ntBASIC1.51□□□□□ -2.17
CHCHD3Q9NX63 MIR625-201ENST00000385047 85 ntBASIC1.51□□□□□ -2.17
CHCHD3Q9NX63 MRPL42P3-201ENST00000401492 326 ntBASIC1.51□□□□□ -2.17
CHCHD3Q9NX63 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.51□□□□□ -2.17
CHCHD3Q9NX63 AC092423.1-201ENST00000430165 186 ntBASIC1.51□□□□□ -2.17
CHCHD3Q9NX63 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.51□□□□□ -2.17
CHCHD3Q9NX63 AC098614.3-201ENST00000438957 440 ntBASIC1.51□□□□□ -2.17
CHCHD3Q9NX63 PGBD4P5-201ENST00000445958 426 ntBASIC1.51□□□□□ -2.17
CHCHD3Q9NX63 RPS27P1-201ENST00000450552 247 ntBASIC1.51□□□□□ -2.17
CHCHD3Q9NX63 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
CHCHD3Q9NX63 SCARNA16.2-201ENST00000516520 172 ntBASIC1.51□□□□□ -2.17
CHCHD3Q9NX63 RNU6-264P-201ENST00000517134 104 ntBASIC1.51□□□□□ -2.17
CHCHD3Q9NX63 RNU7-128P-201ENST00000517247 62 ntBASIC1.51□□□□□ -2.17
CHCHD3Q9NX63 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.51□□□□□ -2.17
CHCHD3Q9NX63 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.51□□□□□ -2.17
CHCHD3Q9NX63 Y_RNA.404-201ENST00000383978 102 ntBASIC1.5□□□□□ -2.17
CHCHD3Q9NX63 RNU6-1310P-201ENST00000384153 107 ntBASIC1.5□□□□□ -2.17
CHCHD3Q9NX63 Y_RNA.557-201ENST00000384680 107 ntBASIC1.5□□□□□ -2.17
CHCHD3Q9NX63 SNORA75.6-201ENST00000391318 127 ntBASIC1.5□□□□□ -2.17
CHCHD3Q9NX63 RNU6-1186P-201ENST00000410429 97 ntBASIC1.5□□□□□ -2.17
CHCHD3Q9NX63 PDCL2P1-201ENST00000419302 352 ntBASIC1.5□□□□□ -2.17
CHCHD3Q9NX63 AC245047.3-201ENST00000429428 127 ntBASIC1.5□□□□□ -2.17
CHCHD3Q9NX63 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.5□□□□□ -2.17
CHCHD3Q9NX63 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.5□□□□□ -2.17
CHCHD3Q9NX63 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.5□□□□□ -2.17
CHCHD3Q9NX63 RNU7-4P-201ENST00000516961 62 ntBASIC1.5□□□□□ -2.17
CHCHD3Q9NX63 RNU6-548P-201ENST00000517083 115 ntBASIC1.5□□□□□ -2.17
CHCHD3Q9NX63 AP003033.1-201ENST00000527244 415 ntBASIC1.5□□□□□ -2.17
CHCHD3Q9NX63 RAB11AP2-201ENST00000545905 639 ntBASIC1.5□□□□□ -2.17
CHCHD3Q9NX63 FRG2DP-202ENST00000566967 323 ntBASIC1.5□□□□□ -2.17
CHCHD3Q9NX63 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.5□□□□□ -2.17
CHCHD3Q9NX63 AC099654.14-201ENST00000638599 341 ntBASIC1.5□□□□□ -2.17
CHCHD3Q9NX63 AC073544.1-201ENST00000600110 1595 ntBASIC1.5□□□□□ -2.17
CHCHD3Q9NX63 SNORD81.2-201ENST00000365153 76 ntBASIC1.49□□□□□ -2.17
CHCHD3Q9NX63 SNORA4.2-201ENST00000365313 147 ntBASIC1.49□□□□□ -2.17
CHCHD3Q9NX63 Y_RNA.473-201ENST00000384333 102 ntBASIC1.49□□□□□ -2.17
CHCHD3Q9NX63 RNU6-1031P-201ENST00000384773 107 ntBASIC1.49□□□□□ -2.17
CHCHD3Q9NX63 AL034345.1-201ENST00000407768 123 ntBASIC1.49□□□□□ -2.17
CHCHD3Q9NX63 ELOCP21-201ENST00000412558 336 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms