Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MIR502-201ENST00000606349 86 ntBASIC1.79□□□□□ -2.12
BLOC1S4Q9NUP1 AL669831.3-213ENST00000636676 183 ntBASIC1.79□□□□□ -2.12
BLOC1S4Q9NUP1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
BLOC1S4Q9NUP1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
BLOC1S4Q9NUP1 Y_RNA.404-201ENST00000383978 102 ntBASIC1.78□□□□□ -2.12
BLOC1S4Q9NUP1 RNU6-1145P-201ENST00000384246 107 ntBASIC1.78□□□□□ -2.12
BLOC1S4Q9NUP1 Y_RNA.557-201ENST00000384680 107 ntBASIC1.78□□□□□ -2.12
BLOC1S4Q9NUP1 RNU6-331P-201ENST00000384724 107 ntBASIC1.78□□□□□ -2.12
BLOC1S4Q9NUP1 PDCL2P1-201ENST00000419302 352 ntBASIC1.78□□□□□ -2.12
BLOC1S4Q9NUP1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.78□□□□□ -2.12
BLOC1S4Q9NUP1 RNA5SP445-201ENST00000515889 115 ntBASIC1.78□□□□□ -2.12
BLOC1S4Q9NUP1 RN7SKP49-201ENST00000516675 260 ntBASIC1.78□□□□□ -2.12
BLOC1S4Q9NUP1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.78□□□□□ -2.12
BLOC1S4Q9NUP1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.78□□□□□ -2.12
BLOC1S4Q9NUP1 AC125232.2-201ENST00000592457 143 ntBASIC1.78□□□□□ -2.12
BLOC1S4Q9NUP1 MIR8063-201ENST00000621930 81 ntBASIC1.78□□□□□ -2.12
BLOC1S4Q9NUP1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
BLOC1S4Q9NUP1 RNA5SP363-201ENST00000365072 115 ntBASIC1.77□□□□□ -2.13
BLOC1S4Q9NUP1 SNORD81.2-201ENST00000365153 76 ntBASIC1.77□□□□□ -2.13
BLOC1S4Q9NUP1 RNU6-1186P-201ENST00000410429 97 ntBASIC1.77□□□□□ -2.13
BLOC1S4Q9NUP1 RN7SKP200-201ENST00000410564 320 ntBASIC1.77□□□□□ -2.13
BLOC1S4Q9NUP1 AL161935.2-201ENST00000414627 60 ntBASIC1.77□□□□□ -2.13
BLOC1S4Q9NUP1 PCNPP5-201ENST00000452246 481 ntBASIC1.77□□□□□ -2.13
BLOC1S4Q9NUP1 SNORD65B-201ENST00000459126 73 ntBASIC1.77□□□□□ -2.13
BLOC1S4Q9NUP1 AC133104.2-201ENST00000615272 193 ntBASIC1.77□□□□□ -2.13
BLOC1S4Q9NUP1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.77□□□□□ -2.13
BLOC1S4Q9NUP1 AC099654.14-201ENST00000638599 341 ntBASIC1.77□□□□□ -2.13
BLOC1S4Q9NUP1 AC006026.1-201ENST00000444025 1803 ntBASIC1.77□□□□□ -2.13
BLOC1S4Q9NUP1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
BLOC1S4Q9NUP1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
BLOC1S4Q9NUP1 RNA5SP190-201ENST00000365222 118 ntBASIC1.76□□□□□ -2.13
BLOC1S4Q9NUP1 Y_RNA.577-201ENST00000384794 101 ntBASIC1.76□□□□□ -2.13
BLOC1S4Q9NUP1 MIR625-201ENST00000385047 85 ntBASIC1.76□□□□□ -2.13
BLOC1S4Q9NUP1 RPL21P1-201ENST00000399532 476 ntBASIC1.76□□□□□ -2.13
BLOC1S4Q9NUP1 AC010154.1-201ENST00000425857 269 ntBASIC1.76□□□□□ -2.13
BLOC1S4Q9NUP1 SUMO1P2-201ENST00000452524 304 ntBASIC1.76□□□□□ -2.13
BLOC1S4Q9NUP1 SNORD13-201ENST00000459299 104 ntBASIC1.76□□□□□ -2.13
BLOC1S4Q9NUP1 RPS26P55-201ENST00000471178 356 ntBASIC1.76□□□□□ -2.13
BLOC1S4Q9NUP1 AC079140.2-201ENST00000506193 142 ntBASIC1.76□□□□□ -2.13
BLOC1S4Q9NUP1 AC022868.1-201ENST00000517767 391 ntBASIC1.76□□□□□ -2.13
BLOC1S4Q9NUP1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.76□□□□□ -2.13
BLOC1S4Q9NUP1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.76□□□□□ -2.13
BLOC1S4Q9NUP1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.76□□□□□ -2.13
BLOC1S4Q9NUP1 MIR4438-201ENST00000585271 93 ntBASIC1.76□□□□□ -2.13
BLOC1S4Q9NUP1 AC080078.3-201ENST00000605407 463 ntBASIC1.76□□□□□ -2.13
BLOC1S4Q9NUP1 AC016727.1-205ENST00000605437 569 ntBASIC1.76□□□□□ -2.13
BLOC1S4Q9NUP1 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.76□□□□□ -2.13
BLOC1S4Q9NUP1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
BLOC1S4Q9NUP1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 RNU6-271P-201ENST00000363858 105 ntBASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 Y_RNA.358-201ENST00000365491 99 ntBASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 Y_RNA.498-201ENST00000384460 102 ntBASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 MIR1323-201ENST00000408090 73 ntBASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 RNU6-370P-201ENST00000411008 104 ntBASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 MRPS10P1-201ENST00000448483 130 ntBASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 MIR2053-201ENST00000459295 91 ntBASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 RPS27P22-201ENST00000478056 241 ntBASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 RNU6-970P-201ENST00000516312 107 ntBASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 SNORA20.3-201ENST00000516880 132 ntBASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 FRG2DP-202ENST00000566967 323 ntBASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 MIR3122-201ENST00000577243 73 ntBASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 U6.108-201ENST00000637764 58 ntBASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 AC073544.1-201ENST00000600110 1595 ntBASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.75□□□□□ -2.13
BLOC1S4Q9NUP1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 MIR410-201ENST00000362222 80 ntBASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 MIR302D-201ENST00000362275 68 ntBASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 MIR562-201ENST00000384894 95 ntBASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 RNA5SP109-201ENST00000391010 116 ntBASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 SNORA75.6-201ENST00000391318 127 ntBASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 MRPL42P3-201ENST00000401492 326 ntBASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 AC138393.2-201ENST00000414742 246 ntBASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 AC114482.1-201ENST00000418010 247 ntBASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 AL591806.2-201ENST00000433122 173 ntBASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 RNU7-4P-201ENST00000516961 62 ntBASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 RNU6-902P-201ENST00000517212 91 ntBASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 SUB1P3-201ENST00000564581 315 ntBASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 AL162424.1-201ENST00000602325 221 ntBASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 AC113139.1-201ENST00000605049 239 ntBASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.74□□□□□ -2.13
BLOC1S4Q9NUP1 RNU6-874P-201ENST00000362390 105 ntBASIC1.73□□□□□ -2.13
BLOC1S4Q9NUP1 SNORD1A-201ENST00000364968 72 ntBASIC1.73□□□□□ -2.13
BLOC1S4Q9NUP1 SNORA4.2-201ENST00000365313 147 ntBASIC1.73□□□□□ -2.13
BLOC1S4Q9NUP1 RNU6-1310P-201ENST00000384153 107 ntBASIC1.73□□□□□ -2.13
BLOC1S4Q9NUP1 MIR194-1-201ENST00000384892 85 ntBASIC1.73□□□□□ -2.13
BLOC1S4Q9NUP1 AC004965.1-201ENST00000413033 213 ntBASIC1.73□□□□□ -2.13
BLOC1S4Q9NUP1 MTCO3P19-201ENST00000415864 321 ntBASIC1.73□□□□□ -2.13
BLOC1S4Q9NUP1 AC245047.3-201ENST00000429428 127 ntBASIC1.73□□□□□ -2.13
BLOC1S4Q9NUP1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms