Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 HMGN2P5-201ENST00000436882 273 ntBASIC2.5□□□□□ -2.01
VPS45Q9NRW7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VPS45Q9NRW7 MIR449C-201ENST00000516047 92 ntBASIC2.5□□□□□ -2.01
VPS45Q9NRW7 RNU1-117P-201ENST00000517041 158 ntBASIC2.5□□□□□ -2.01
VPS45Q9NRW7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS45Q9NRW7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS45Q9NRW7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.5□□□□□ -2.01
VPS45Q9NRW7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS45Q9NRW7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS45Q9NRW7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS45Q9NRW7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.49□□□□□ -2.01
VPS45Q9NRW7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS45Q9NRW7 SNORD114-1-201ENST00000362705 72 ntBASIC2.49□□□□□ -2.01
VPS45Q9NRW7 Y_RNA.376-201ENST00000365638 108 ntBASIC2.49□□□□□ -2.01
VPS45Q9NRW7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.49□□□□□ -2.01
VPS45Q9NRW7 RNU6-20P-201ENST00000384106 107 ntBASIC2.49□□□□□ -2.01
VPS45Q9NRW7 AL359511.1-201ENST00000402970 211 ntBASIC2.49□□□□□ -2.01
VPS45Q9NRW7 RNU2-20P-201ENST00000410425 191 ntBASIC2.49□□□□□ -2.01
VPS45Q9NRW7 AL390729.2-201ENST00000416137 156 ntBASIC2.49□□□□□ -2.01
VPS45Q9NRW7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS45Q9NRW7 PRELID3BP1-201ENST00000457142 540 ntBASIC2.49□□□□□ -2.01
VPS45Q9NRW7 AC234781.5-201ENST00000508429 271 ntBASIC2.49□□□□□ -2.01
VPS45Q9NRW7 SNORA31.25-201ENST00000517242 134 ntBASIC2.49□□□□□ -2.01
VPS45Q9NRW7 MIR4529-201ENST00000578110 78 ntBASIC2.49□□□□□ -2.01
VPS45Q9NRW7 MIR4423-201ENST00000580922 80 ntBASIC2.49□□□□□ -2.01
VPS45Q9NRW7 AC005176.2-201ENST00000596933 147 ntBASIC2.49□□□□□ -2.01
VPS45Q9NRW7 AC008873.1-201ENST00000625051 138 ntBASIC2.49□□□□□ -2.01
VPS45Q9NRW7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
VPS45Q9NRW7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
VPS45Q9NRW7 AC016717.2-201ENST00000609089 5141 ntBASIC2.48□□□□□ -2.01
VPS45Q9NRW7 RNU6-1310P-201ENST00000384153 107 ntBASIC2.48□□□□□ -2.01
VPS45Q9NRW7 SNORA67.2-201ENST00000384300 149 ntBASIC2.48□□□□□ -2.01
VPS45Q9NRW7 SNORD14D-201ENST00000384390 87 ntBASIC2.48□□□□□ -2.01
VPS45Q9NRW7 HMGN2P39-201ENST00000398005 273 ntBASIC2.48□□□□□ -2.01
VPS45Q9NRW7 MIR300-201ENST00000401138 83 ntBASIC2.48□□□□□ -2.01
VPS45Q9NRW7 RNA5SP504-201ENST00000410676 117 ntBASIC2.48□□□□□ -2.01
VPS45Q9NRW7 RPL21P38-201ENST00000418090 167 ntBASIC2.48□□□□□ -2.01
VPS45Q9NRW7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS45Q9NRW7 AC096920.1-201ENST00000423991 241 ntBASIC2.48□□□□□ -2.01
VPS45Q9NRW7 RAB28P5-201ENST00000427490 651 ntBASIC2.48□□□□□ -2.01
VPS45Q9NRW7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.48□□□□□ -2.01
VPS45Q9NRW7 RNU7-14P-201ENST00000459331 62 ntBASIC2.48□□□□□ -2.01
VPS45Q9NRW7 AC098869.1-201ENST00000481627 292 ntBASIC2.48□□□□□ -2.01
VPS45Q9NRW7 Y_RNA.668-201ENST00000516233 93 ntBASIC2.48□□□□□ -2.01
VPS45Q9NRW7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS45Q9NRW7 AL031274.2-201ENST00000599419 203 ntBASIC2.48□□□□□ -2.01
VPS45Q9NRW7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS45Q9NRW7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VPS45Q9NRW7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.47□□□□□ -2.01
VPS45Q9NRW7 MIR410-201ENST00000362222 80 ntBASIC2.47□□□□□ -2.01
VPS45Q9NRW7 SNORD113-8-201ENST00000363497 74 ntBASIC2.47□□□□□ -2.01
VPS45Q9NRW7 SNORD87-201ENST00000364849 89 ntBASIC2.47□□□□□ -2.01
VPS45Q9NRW7 RNU6-1264P-201ENST00000383891 107 ntBASIC2.47□□□□□ -2.01
VPS45Q9NRW7 Y_RNA.396-201ENST00000383949 103 ntBASIC2.47□□□□□ -2.01
VPS45Q9NRW7 RNU6-472P-201ENST00000384299 107 ntBASIC2.47□□□□□ -2.01
VPS45Q9NRW7 RNU6-1026P-201ENST00000384465 108 ntBASIC2.47□□□□□ -2.01
VPS45Q9NRW7 Y_RNA.570-201ENST00000384750 101 ntBASIC2.47□□□□□ -2.01
VPS45Q9NRW7 MIR586-201ENST00000385035 97 ntBASIC2.47□□□□□ -2.01
VPS45Q9NRW7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.47□□□□□ -2.01
VPS45Q9NRW7 NDUFB4P10-201ENST00000452541 359 ntBASIC2.47□□□□□ -2.01
VPS45Q9NRW7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS45Q9NRW7 AC107222.1-201ENST00000510899 637 ntBASIC2.47□□□□□ -2.01
VPS45Q9NRW7 RNU6-965P-201ENST00000516721 96 ntBASIC2.47□□□□□ -2.01
VPS45Q9NRW7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS45Q9NRW7 AC087441.2-201ENST00000529141 262 ntBASIC2.47□□□□□ -2.01
VPS45Q9NRW7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.47□□□□□ -2.01
VPS45Q9NRW7 AC011373.1-201ENST00000607270 237 ntBASIC2.47□□□□□ -2.01
VPS45Q9NRW7 MIR1248-201ENST00000629190 106 ntBASIC2.47□□□□□ -2.01
VPS45Q9NRW7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VPS45Q9NRW7 Y_RNA.84-201ENST00000363011 104 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 U3.8-201ENST00000363675 217 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 RNA5SP99-201ENST00000364020 114 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 RNU6-1305P-201ENST00000364353 104 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 Y_RNA.288-201ENST00000364854 92 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 SNORA72.2-201ENST00000365028 127 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 Y_RNA.332-201ENST00000365271 113 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 Y_RNA.581-201ENST00000391017 97 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 SNORD23.1-201ENST00000408212 104 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 RNA5SP475-201ENST00000410568 110 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.46□□□□□ -2.02
VPS45Q9NRW7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS45Q9NRW7 TRBVB-201ENST00000477100 408 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 SEPT14P8-201ENST00000508026 178 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 RNU6-107P-201ENST00000516643 102 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 RNU7-193P-201ENST00000516723 65 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 RNU6-570P-201ENST00000517051 105 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.46□□□□□ -2.02
VPS45Q9NRW7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS45Q9NRW7 SNORD113-5-201ENST00000607261 78 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 AC067747.1-201ENST00000608026 250 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 MIR1291-201ENST00000627649 87 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 MIR3674-201ENST00000636576 68 ntBASIC2.46□□□□□ -2.02
VPS45Q9NRW7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VPS45Q9NRW7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VPS45Q9NRW7 AC008555.8-201ENST00000623602 2168 ntBASIC2.45□□□□□ -2.02
VPS45Q9NRW7 snoU2_19.2-201ENST00000363024 80 ntBASIC2.45□□□□□ -2.02
VPS45Q9NRW7 Y_RNA.238-201ENST00000364441 102 ntBASIC2.45□□□□□ -2.02
VPS45Q9NRW7 SNORD31B-201ENST00000364977 69 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms