Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 U2.20-201ENST00000613956 192 ntBASIC1.98□□□□□ -2.09
POLR1BQ9H9Y6 U2.9-201ENST00000615427 191 ntBASIC1.98□□□□□ -2.09
POLR1BQ9H9Y6 U2.11-201ENST00000616345 191 ntBASIC1.98□□□□□ -2.09
POLR1BQ9H9Y6 U2.2-201ENST00000616535 191 ntBASIC1.98□□□□□ -2.09
POLR1BQ9H9Y6 U2.3-201ENST00000617785 191 ntBASIC1.98□□□□□ -2.09
POLR1BQ9H9Y6 U2.19-201ENST00000618602 191 ntBASIC1.98□□□□□ -2.09
POLR1BQ9H9Y6 RNU2-1-201ENST00000618664 191 ntBASIC1.98□□□□□ -2.09
POLR1BQ9H9Y6 U2.1-201ENST00000618978 145 ntBASIC1.98□□□□□ -2.09
POLR1BQ9H9Y6 U2.6-201ENST00000619225 191 ntBASIC1.98□□□□□ -2.09
POLR1BQ9H9Y6 U2.5-201ENST00000619465 191 ntBASIC1.98□□□□□ -2.09
POLR1BQ9H9Y6 U2.10-201ENST00000620268 191 ntBASIC1.98□□□□□ -2.09
POLR1BQ9H9Y6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 RNA5SP361-201ENST00000362686 118 ntBASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 RNU6-1266P-201ENST00000362794 105 ntBASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 snoU2-30.2-201ENST00000362805 70 ntBASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 Y_RNA.197-201ENST00000364004 102 ntBASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 MIR628-201ENST00000385229 95 ntBASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 Y_RNA.579-201ENST00000390939 94 ntBASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 RNU2-40P-201ENST00000410833 196 ntBASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 MTCO3P19-201ENST00000415864 321 ntBASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 AC244636.1-201ENST00000421152 228 ntBASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 RNU6-1041P-201ENST00000516254 102 ntBASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 AC023442.1-201ENST00000531247 422 ntBASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 SUB1P4-201ENST00000566062 339 ntBASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 VN1R91P-201ENST00000594377 169 ntBASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 AL627230.6-201ENST00000611129 280 ntBASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
POLR1BQ9H9Y6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 Y_RNA.61-201ENST00000362835 102 ntBASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 SNORA72.2-201ENST00000365028 127 ntBASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 AL117342.1-201ENST00000404861 406 ntBASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 MIR1253-201ENST00000408273 105 ntBASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 ELOCP21-201ENST00000412558 336 ntBASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 AC009310.1-201ENST00000414414 451 ntBASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 HMGN2P19-201ENST00000425149 265 ntBASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 RPL23AP6-201ENST00000446637 472 ntBASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 AC027575.1-201ENST00000481064 460 ntBASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 RN7SL274P-201ENST00000492268 272 ntBASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 RNU6-1053P-201ENST00000515930 101 ntBASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 RNVU1-2-201ENST00000516326 135 ntBASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 AC069114.2-201ENST00000604699 304 ntBASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 AC138305.3-201ENST00000624988 240 ntBASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 MIR338-201ENST00000636369 67 ntBASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
POLR1BQ9H9Y6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.95□□□□□ -2.1
POLR1BQ9H9Y6 Y_RNA.112-201ENST00000363250 102 ntBASIC1.95□□□□□ -2.1
POLR1BQ9H9Y6 Y_RNA.395-201ENST00000383945 109 ntBASIC1.95□□□□□ -2.1
POLR1BQ9H9Y6 Y_RNA.460-201ENST00000384255 102 ntBASIC1.95□□□□□ -2.1
POLR1BQ9H9Y6 Y_RNA.498-201ENST00000384460 102 ntBASIC1.95□□□□□ -2.1
POLR1BQ9H9Y6 SUMO2P12-201ENST00000405924 140 ntBASIC1.95□□□□□ -2.1
POLR1BQ9H9Y6 AC018865.2-201ENST00000423631 129 ntBASIC1.95□□□□□ -2.1
POLR1BQ9H9Y6 AC069257.2-201ENST00000441819 155 ntBASIC1.95□□□□□ -2.1
POLR1BQ9H9Y6 SNORA40.9-201ENST00000515895 93 ntBASIC1.95□□□□□ -2.1
POLR1BQ9H9Y6 RNU6-107P-201ENST00000516643 102 ntBASIC1.95□□□□□ -2.1
POLR1BQ9H9Y6 AC018448.1-201ENST00000552843 316 ntBASIC1.95□□□□□ -2.1
POLR1BQ9H9Y6 MIR4299-201ENST00000577899 72 ntBASIC1.95□□□□□ -2.1
POLR1BQ9H9Y6 AL080274.1-201ENST00000605565 220 ntBASIC1.95□□□□□ -2.1
POLR1BQ9H9Y6 AC006001.4-201ENST00000622243 395 ntBASIC1.95□□□□□ -2.1
POLR1BQ9H9Y6 AC006435.5-201ENST00000624486 112 ntBASIC1.95□□□□□ -2.1
POLR1BQ9H9Y6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
POLR1BQ9H9Y6 Y_RNA.27-201ENST00000362540 103 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 Y_RNA.39-201ENST00000362620 98 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 RNU6-862P-201ENST00000362804 105 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 RNU6-797P-201ENST00000363101 109 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 RNU1-96P-201ENST00000364163 162 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 RNU6-1019P-201ENST00000364424 107 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 RNU6-1310P-201ENST00000384153 107 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 SNORD12B-201ENST00000410433 91 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 AC016909.1-201ENST00000415916 166 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 AC099677.2-201ENST00000436385 175 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 HMGN2P34-201ENST00000437647 269 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 Y_RNA.639-201ENST00000458981 102 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 MRPS17P9-201ENST00000511924 393 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 AC024995.1-201ENST00000523014 93 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 AC022432.1-201ENST00000595739 310 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 AC010900.2-201ENST00000604508 210 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 AL050343.2-201ENST00000607338 280 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 Y_RNA.783-201ENST00000613546 102 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 AL357075.2-201ENST00000614906 189 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
POLR1BQ9H9Y6 AC245060.5-201ENST00000610778 3293 ntBASIC1.93□□□□□ -2.1
POLR1BQ9H9Y6 Y_RNA.5-201ENST00000362334 102 ntBASIC1.93□□□□□ -2.1
POLR1BQ9H9Y6 SNORD78.2-201ENST00000391076 69 ntBASIC1.93□□□□□ -2.1
POLR1BQ9H9Y6 SNORA40.18-201ENST00000391200 128 ntBASIC1.93□□□□□ -2.1
POLR1BQ9H9Y6 RNA5SP100-201ENST00000410903 110 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms