Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RNU2-61P-201ENST00000411069 191 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 AC024067.1-201ENST00000426199 223 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 HMGN2P18-201ENST00000450680 270 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.650-201ENST00000459002 102 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.55□□□□□ -2
AMBRA1Q9C0C7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.55□□□□□ -2
AMBRA1Q9C0C7 RNU6-965P-201ENST00000516721 96 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.777-201ENST00000516982 102 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.55□□□□□ -2
AMBRA1Q9C0C7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.55□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.771-201ENST00000598668 102 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 AC005828.6-201ENST00000606610 232 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.789-201ENST00000622480 102 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 MIR1248-201ENST00000629190 106 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 U6.115-201ENST00000636045 103 ntBASIC2.55□□□□□ -2
AMBRA1Q9C0C7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.83-201ENST00000363005 113 ntBASIC2.54□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.199-201ENST00000364014 102 ntBASIC2.54□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.292-201ENST00000364904 97 ntBASIC2.54□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.297-201ENST00000364950 91 ntBASIC2.54□□□□□ -2
AMBRA1Q9C0C7 RNY4P28-201ENST00000365281 93 ntBASIC2.54□□□□□ -2
AMBRA1Q9C0C7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.54□□□□□ -2
AMBRA1Q9C0C7 AC105272.1-201ENST00000438604 198 ntBASIC2.54□□□□□ -2
AMBRA1Q9C0C7 AC074290.1-201ENST00000448883 135 ntBASIC2.54□□□□□ -2
AMBRA1Q9C0C7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.54□□□□□ -2
AMBRA1Q9C0C7 AC114982.1-201ENST00000469402 321 ntBASIC2.54□□□□□ -2
AMBRA1Q9C0C7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.54□□□□□ -2
AMBRA1Q9C0C7 ATP5EP1-201ENST00000510257 156 ntBASIC2.54□□□□□ -2
AMBRA1Q9C0C7 RNU6-182P-201ENST00000516970 105 ntBASIC2.54□□□□□ -2
AMBRA1Q9C0C7 AC022616.8-201ENST00000533569 253 ntBASIC2.54□□□□□ -2
AMBRA1Q9C0C7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.54□□□□□ -2
AMBRA1Q9C0C7 AL356280.1-201ENST00000603614 379 ntBASIC2.54□□□□□ -2
AMBRA1Q9C0C7 AC010297.1-201ENST00000623948 149 ntBASIC2.54□□□□□ -2
AMBRA1Q9C0C7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.54□□□□□ -2
AMBRA1Q9C0C7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
AMBRA1Q9C0C7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
AMBRA1Q9C0C7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
AMBRA1Q9C0C7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
AMBRA1Q9C0C7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.53□□□□□ -2
AMBRA1Q9C0C7 SNORD115-30-201ENST00000364117 82 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.217-201ENST00000364214 105 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.274-201ENST00000364714 101 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 RNU6-438P-201ENST00000365561 103 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 RNU6-975P-201ENST00000384296 105 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 RNU6-220P-201ENST00000390919 107 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 RNU2-63P-201ENST00000410792 194 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 AL135938.1-201ENST00000443141 297 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 UBBP3-201ENST00000445497 241 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 AL138752.1-201ENST00000452964 351 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.638-201ENST00000459374 113 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.641-201ENST00000459414 105 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 RNU6-948P-201ENST00000516374 107 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 SNORA81.3-201ENST00000517283 198 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 MIR4319-201ENST00000577285 85 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 MIR3684-201ENST00000579779 74 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 MIR3616-201ENST00000584070 92 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 AL355297.2-201ENST00000604792 129 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.53□□□□□ -2
AMBRA1Q9C0C7 Y_RNA.29-201ENST00000362570 113 ntBASIC2.52□□□□□ -2.01
AMBRA1Q9C0C7 RNU6-461P-201ENST00000364195 107 ntBASIC2.52□□□□□ -2.01
AMBRA1Q9C0C7 RNU6-1180P-201ENST00000364935 107 ntBASIC2.52□□□□□ -2.01
AMBRA1Q9C0C7 DEFA7P-201ENST00000382676 285 ntBASIC2.52□□□□□ -2.01
AMBRA1Q9C0C7 MIR561-201ENST00000385216 97 ntBASIC2.52□□□□□ -2.01
AMBRA1Q9C0C7 AL031003.1-201ENST00000404229 172 ntBASIC2.52□□□□□ -2.01
AMBRA1Q9C0C7 Y_RNA.626-201ENST00000411288 95 ntBASIC2.52□□□□□ -2.01
AMBRA1Q9C0C7 AC063976.3-201ENST00000426849 329 ntBASIC2.52□□□□□ -2.01
AMBRA1Q9C0C7 COX6CP14-201ENST00000469580 174 ntBASIC2.52□□□□□ -2.01
AMBRA1Q9C0C7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
AMBRA1Q9C0C7 SNORD116-28-201ENST00000516123 91 ntBASIC2.52□□□□□ -2.01
AMBRA1Q9C0C7 MIR3117-201ENST00000584034 78 ntBASIC2.52□□□□□ -2.01
AMBRA1Q9C0C7 snoU18.1-201ENST00000629629 71 ntBASIC2.52□□□□□ -2.01
AMBRA1Q9C0C7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.52□□□□□ -2.01
AMBRA1Q9C0C7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.52□□□□□ -2.01
AMBRA1Q9C0C7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
AMBRA1Q9C0C7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
AMBRA1Q9C0C7 RNU1-23P-201ENST00000363361 144 ntBASIC2.51□□□□□ -2.01
AMBRA1Q9C0C7 SNORD56.5-201ENST00000364281 72 ntBASIC2.51□□□□□ -2.01
AMBRA1Q9C0C7 MIR196B-201ENST00000384852 84 ntBASIC2.51□□□□□ -2.01
AMBRA1Q9C0C7 MIR627-201ENST00000384979 97 ntBASIC2.51□□□□□ -2.01
AMBRA1Q9C0C7 AC016925.1-201ENST00000458303 298 ntBASIC2.51□□□□□ -2.01
AMBRA1Q9C0C7 SNORA48.11-201ENST00000517015 89 ntBASIC2.51□□□□□ -2.01
AMBRA1Q9C0C7 snoZ196.1-201ENST00000625269 89 ntBASIC2.51□□□□□ -2.01
AMBRA1Q9C0C7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
AMBRA1Q9C0C7 RNU6-418P-201ENST00000384035 107 ntBASIC2.5□□□□□ -2.01
AMBRA1Q9C0C7 SNORD14D-201ENST00000384390 87 ntBASIC2.5□□□□□ -2.01
AMBRA1Q9C0C7 AL357139.1-201ENST00000407792 426 ntBASIC2.5□□□□□ -2.01
AMBRA1Q9C0C7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.5□□□□□ -2.01
AMBRA1Q9C0C7 RNU6-710P-201ENST00000410424 105 ntBASIC2.5□□□□□ -2.01
AMBRA1Q9C0C7 AC003685.2-201ENST00000422795 395 ntBASIC2.5□□□□□ -2.01
AMBRA1Q9C0C7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
AMBRA1Q9C0C7 AC016717.1-201ENST00000448918 286 ntBASIC2.5□□□□□ -2.01
AMBRA1Q9C0C7 SUMO1P2-201ENST00000452524 304 ntBASIC2.5□□□□□ -2.01
AMBRA1Q9C0C7 PRELID3BP1-201ENST00000457142 540 ntBASIC2.5□□□□□ -2.01
AMBRA1Q9C0C7 AC011921.3-201ENST00000605540 361 ntBASIC2.5□□□□□ -2.01
AMBRA1Q9C0C7 AC004792.1-201ENST00000614523 137 ntBASIC2.5□□□□□ -2.01
AMBRA1Q9C0C7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.5□□□□□ -2.01
AMBRA1Q9C0C7 AC073349.3-201ENST00000617616 186 ntBASIC2.5□□□□□ -2.01
AMBRA1Q9C0C7 MIR7843-201ENST00000622274 79 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms